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LOCUS XM_017149845 7402 bp mRNA linear INV 09-DEC-2024 variant X3, mRNA. ACCESSION XM_017149845 VERSION XM_017149845.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017149845.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7402 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7402 /gene="Sec16" /note="Secretory 16; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108062963" CDS 162..7013 /gene="Sec16" /codon_start=1 /product="uncharacterized protein Sec16 isoform X1" /protein_id="XP_017005334.2" /db_xref="GeneID:108062963" /translation="MLHNNAPWLPPHQQQQQQQQQAPQQHATPQQQQQQQQPHPAQQQ HQQHQQLYASQMFQQQQPNYWPEDQQQQQQSLNYNNYFAGQQQQLPLQQQQQQLPLQQ QQPQQPTQQQHNIQQQLYYPTHQQPQVPAPAEPALDSFDNNNSGGGGGGGGWGDWGDW NDNSNNNNSLSNEALLEPSGQLLEDSFNVQSSPGSWQAFATGNSVNNNVELPPPTDQQ AASLPQQPEVGQEPELDAIVPPQAFQNQPPTSLSAFAAPPFAVVAPPAPLAGGVAPPA PLAGVVAPPTDAAGIAPPAALPPSLTPAAGNPFKRSAGLNKRVNIMASPAGGAPSPPA PAVAPLAPPVAPPPGEAHGDGFNLLAAPPVEASPGAPIPAATASLYAQPAVDNQEVLS APNDERAQYLQTSHLSEQLGEGEADQDAGLLPPPGLSRLVLGQPELDSQQQRLVTGAT EQPALDVAQAAALHMQERQADGEDTSDDGGQQVRNIQTPPRRVVTGVETNAPSLREQV LDGENLEDREAIPPPALAELPPTLSVHHNIQPDEPELQLHHINQPPQAVTPQPQQPQQ PQLPLLQQQQPQQQEKKRAAAGGRRANASLDLESEDESDEFLQSERERDRERERRDLM DERQGRGRSHGHYTYDGETEDSVRGAAHHETKSLRETQHRRSNNHDSTRSRRHPAEPK AERERERERERDRERERHWRRRSNKYHSGGEDQERSYDHSRRYNNSNYDGESDNPEIN HLGEGELDGGGTEGRGGGGRSSKTGRSQRRSAAEEPSFDYYEPERDRDHDRQYSRRSN KQPSSADKSRSSGGRRSYENQGRSGRPEEGRRRHQDLRNWDGGYEEYRRKSSRNSDLE KERINGGNTSGGGGGGSGGGGSGSGKRRNQYDQYGGAYDSYSMYEQMSRNPHAYADMY AKFYGQMINSMTAAAVSAAASKSGVPGGAAAAAAAIPGLVPGAVPVSAAQLVAAAAAA SGGSVSGSSEAALLRERERYTHAYITQANEFHRQQYKELIYQQQQQQQQQQHHREDPL NSSFNITEDNASFYGSRGGSIYNQYHPYPSLSSARSLSNLNGDGRNSRCGPYYAGSEC GLDIRAAAEAAPSTYGGLATAGTVTTTAVARPPRRRTPLQFNRPHLVASYAMSLLLKV KPKYAGRGRLRNDVEVAPPRIRDGTSSLLRMYPGPLQGRKLHKDKIISFCKEQIRLGP TKGCTVLYATQKSPQGSVVKYRASHALMWHLLILLLRQNGYIADTDVGDLLLENQQEY PYEPSEYEAENEPDVEAEQEAAAPGEKSVESDLDSESAAGAAAATPEETPAGGATNGG DAGAPQSPLSEQAATDKFRSYVLRGNVEEALQWATDNGLWTHAFFLALYEDRYALTDV AQKFLNRAIKANDPLQTLYQMKSCQTPACVSQLRDEQWGDWRSHLSILVTNKSRQPKY DRSSVVALGDTLFQRGDIYAAHFCYLVAQEEFGRYDSSATELTTLTANVPRLILLGSS HYKHFNEFASNEAIIMTEIYEYARSLFDPKFSIAHFQHYKFLLATRILDYGQHFRCTN YLEQIARHIELKPESYDIDFIQRVCGLAERLRYHDPILINRVSFASPPNAASKDSAAP EEKAWLRQLRSLADVQPQQEQLQLHHQVQQQQQEQNDIDQQFAEVNKQFRELNMQYDG GNLESTLQTQLPPVEQQQQPAQSEVPPPQQQYYEPPPAAAAAAAQVPAESDPYGQQQG SYYDPNAGMQHQYDPNAGIQHQYDPNTEAHHQYEHGQIEPASEAYQPAADPSAAPAGY GYDYWSGTQQPPYGDEPALKDEAEEEEDEQQILQQAQQQQQLRVAKQQQEQHTRTNGA ANSNNNRFKSNALKQEKGSSITALRKRQEASRTATIAAAAAAIAQITPAKVATAAAAA TTTAATSAKAFNLNDVSSFSHIHKRHQATSSSSSNNKPATATAAAATFTTVAALPNQL PSCRKSNSQNRTYLGTPKTLTTPTRFIAAKAATVTATPTAPTTLTTTSTSLGARGSST KRVNFNLPTTIAESEQEFQHELNFEEADEEQEEVEEDEEENALALAQARPSGHLSRKP HIVFNGTYPIDMPLTQSKSSSYDPEANADRGDLQRYRNYMLHDYVIDEDAEGEEQAQE EQEEDEYADEDLFPYAHDADESFDDGDYYTHELLNKYGIIPSKEGAQRTPATVEAATI TSNSASKPQHVWSMEELIANPAIPLNYKKMCTEVEQSLSRFESYLDSKKEQQQMPPPL AAVRTFDIDAPTRRGHRSSTSSANAGLALRSKKKL" misc_feature <792..1526 /gene="Sec16" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature <795..>1088 /gene="Sec16" /note="Kinetoplastid RNA Editing Protein A (KREPA); Region: KREPA; cl49620" /db_xref="CDD:483960" misc_feature 3693..4922 /gene="Sec16" /note="Ancestral coatomer element 1 (ACE1) of COPII coat complex assembly protein Sec16; Region: ACE1-Sec16-like; cd09233" /db_xref="CDD:187750" misc_feature order(4158..4163,4167..4172,4176..4190,4194..4196, 4200..4202,4230..4232,4236..4238,4242..4247,4251..4256, 4266..4268,4284..4286,4305..4307,4335..4337,4350..4352, 4359..4361,4443..4448) /gene="Sec16" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:187750" misc_feature order(4689..4691,4755..4760,4764..4769,4776..4781, 4788..4790,4869..4874,4881..4886,4893..4895,4905..4907) /gene="Sec16" /note="heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:187750" ORIGIN 1 actgctccaa ttttttcccc cagagagtgt tttcactttt gacttgcaaa gcagaaaaga 61 agaaaaacag gaggaaaata cgcaagttca aaatatattc tagggccagt ttacgaaaaa 121 ttaagtgtta aaattatcag tggcttggaa aaagatccaa catgttgcac aacaatgcgc 181 cctggctgcc accgcatcag cagcagcagc agcagcagca acaggccccg cagcaacatg 241 caacgcccca acagcagcag cagcagcagc aacctcatcc tgcacagcag cagcatcagc 301 agcatcagca gctctacgcc agccaaatgt tccagcaaca gcagccaaat tactggccgg 361 aggatcagca gcagcagcag cagtcgctga actacaataa ctactttgca ggacagcagc 421 agcaactgcc actgcagcag caacagcagc aactgccact gcagcaacag cagccacaac 481 agcctacgca gcagcaacat aatatccagc agcaactgta ttatcccact caccagcagc 541 cacaagtccc ggctccagcg gaacccgctc tggactcgtt tgacaacaat aatagcggcg 601 gaggaggagg aggaggtggc tggggtgatt ggggcgattg gaacgacaat agcaacaaca 661 ataatagcct tagcaacgag gccttgctgg agccatcggg gcaactgctc gaggactcct 721 tcaatgtcca gtcctcgcca ggcagttggc aagcctttgc caccggcaat agtgtcaata 781 acaatgtgga gctgccgcct ccaacggatc agcaggcagc atcattgcct cagcagccgg 841 aggttggtca ggaacccgaa ctggatgcca ttgtgccgcc ccaggctttc caaaaccagc 901 caccaacatc actttctgcg tttgctgcac caccatttgc tgtggtagct cctccagcgc 961 ctcttgccgg cggggtagct cctccagcgc ctcttgccgg cgtggtagca ccaccaacgg 1021 acgccgctgg cattgcacca ccggctgcac tgccgcccag cttgactcca gcggctggca 1081 atcccttcaa gcgctccgcg ggcctcaata agcgagtgaa cataatggcc agtccggcgg 1141 gcggagctcc ttcaccacca gcaccggctg tagcgccatt agctcctcca gttgccccgc 1201 ctcccgggga ggcccatggc gatggcttca acttgctggc ggcaccacct gttgaggctt 1261 caccaggtgc cccaattcct gcagcaaccg catcgctgta cgctcagcca gcggtggaca 1321 accaggaggt gttgtccgcc cctaatgacg agcgggcgca gtacctgcag acgagtcacc 1381 tgtccgagca gctgggcgag ggcgaggcgg atcaggatgc gggtctgctg ccgccaccgg 1441 gcttgtcccg tctggttctg ggccagccgg agctggactc gcagcagcag cgcctggtca 1501 ccggcgccac ggagcagccg gcgctcgatg tcgcccaggc ggctgccctg cacatgcagg 1561 agcgtcaggc ggacggcgag gacacctcgg acgacggcgg gcagcaagtg cgcaatatac 1621 agacgccacc gcgtcgcgtc gtcacgggcg tggagacgaa cgcaccatcg ttgagggagc 1681 aggtgctgga tggtgagaat ctggaggatc gcgaagccat tccgccacca gcgctggccg 1741 aacttccccc gacattgtcg gtacatcaca atattcagcc cgatgagccg gagctgcagc 1801 tgcatcacat caaccaaccg ccgcaggcag tcaccccgca accacagcaa ccacagcaac 1861 cgcagctacc tcttctacag cagcagcagc cgcaacagca ggagaagaag cgggcggcgg 1921 cggggggacg tcgcgcgaat gcctcgctgg atctggagtc cgaggacgag tcggatgagt 1981 tcctgcagag cgaaagggag cgcgatcggg agcgcgagcg ccgggatctg atggacgagc 2041 ggcagggccg cggacgcagc catggtcact acacctacga tggcgaaacg gaggactcgg 2101 tacgcggtgc tgcccaccac gagaccaaat cgctgaggga aacgcagcac aggcggagca 2161 acaatcacga ctcgacgcga tcgcgtcgcc atccagcgga accgaaggcc gagcgggaaa 2221 gggaaaggga gcgggaacgg gatagggagc gtgagcggca ctggcggcga cgctcgaata 2281 agtatcacag tggcggcgag gatcaggagc gttcgtacga tcattcgcgt cgctacaaca 2341 acagcaacta cgacggcgaa tcggataatc ccgagatcaa tcatctcggc gagggagaac 2401 tcgatggcgg aggcactgag ggaagaggag gtggtggccg gagcagtaaa accggccgca 2461 gccagcgacg cagcgccgcc gaggagccgt cgttcgacta ctacgaaccg gaacgcgatc 2521 gtgatcacga tcgtcaatac tccagacgct ccaacaaaca gccatcgtcg gccgacaaat 2581 cgcgatcgtc gggcggacga cggagctacg agaatcaggg acgcagtggc cgcccagagg 2641 agggtcgccg acgtcaccag gatctgcgga actgggacgg tggctacgag gagtaccgcc 2701 ggaagagctc gcgcaacagt gatctcgaga aggagcgcat caacggaggc aacaccagcg 2761 gcggcggcgg cggtggcagc ggaggaggtg gttccggttc cggcaagcgt cgcaatcagt 2821 atgatcagta tggcggtgcc tacgattcgt actccatgta cgagcagatg tcgcgcaatc 2881 cgcatgccta tgccgatatg tacgccaagt tctacggcca gatgatcaac tcgatgacgg 2941 cggccgctgt ctcggcggct gcctcgaagt ccggagttcc tggcggcgca gcagcagcag 3001 cagcagcgat tcctggcttg gtgcccggcg ctgttccggt gagtgccgcc cagttggtgg 3061 ccgccgccgc cgccgcaagc ggaggcagtg tcagcgggag cagtgaagcc gccctgctga 3121 gggagcgaga aaggtataca cacgcataca taacccaagc caatgaattc catcgccaac 3181 aatacaaaga gctgatctac cagcaacaac aacaacaaca acaacagcaa catcacaggg 3241 aggatccgct aaactcgagt tttaacatta cggaggataa tgccagtttt tacggatcac 3301 gaggaggatc catctataac caataccatc catatccttc gctctccagt gcccgctcgt 3361 tgagcaattt aaacggcgat ggacgcaatt cccgatgcgg accgtattac gctggttccg 3421 agtgcggtct cgatatcaga gctgctgccg aagcggcacc atcgacctac ggtggattgg 3481 ccaccgctgg aacggtgacc accaccgcgg tggctcgtcc gccgcgccga cgcacgcccc 3541 tgcagttcaa ccggccccat ttggtggcct cgtacgcgat gagtctgctg ctgaaggtga 3601 agcccaagta cgccggccgc gggcgtttgc gcaacgatgt ggaggtggcg ccgccgcgca 3661 tccgcgacgg aacgagcagc ctgctgcgca tgtatccggg tcccctgcag ggccgcaagc 3721 tgcacaagga caagatcatc agcttctgca aggaacagat ccgactggga cccaccaagg 3781 gctgcaccgt gctctatgcc acccagaaga gtccgcaggg cagcgtggtc aagtaccgtg 3841 cctcgcatgc gctcatgtgg cacctgctca tactgctgct gcgccaaaat gggtacattg 3901 ccgacactga tgtgggcgat ctgttgctgg agaaccagca ggagtatccc tacgagccca 3961 gcgagtacga ggcggagaac gagccggatg ttgaggctga acaggaggcc gcagctcccg 4021 gggagaagtc agtggaatcg gatttagaca gcgaatcggc agcgggagca gctgcagcca 4081 cgccagagga aacaccagcc ggtggcgcaa ccaatggagg cgatgcggga gctccacaat 4141 cgcctctgtc ggaacaggcg gccacggaca agttccgcag ctatgtgctg cgcggcaacg 4201 tcgaggaggc cctccagtgg gccaccgaca atggcctgtg gacgcacgcc tttttcctgg 4261 ccctctacga ggatcgctac gccctgacgg atgtcgccca gaagttcctc aatcgcgcga 4321 tcaaggccaa cgatccgctg cagacgctct accagatgaa gagctgccag acgccggcgt 4381 gcgtcagcca gctgagggac gagcagtggg gcgactggcg gtcgcatctc tccattctgg 4441 tgacgaacaa gagccgccag ccgaagtacg atcgcagctc ggtggtggcg ctcggcgaca 4501 cgctcttcca gcggggcgac atctatgcgg cgcacttttg ctatctggtg gcccaggagg 4561 agttcggccg ctacgatagc tcggccacag agctaaccac attgaccgcc aatgtgccca 4621 gactcatcct gctgggctcc tcgcactaca agcacttcaa tgagttcgcc agcaacgagg 4681 ccatcatcat gacggagatc tacgagtatg ctcgctcgct gttcgatccc aagttcagca 4741 ttgcccactt ccagcactac aagttcctgc tggccaccag gatcctcgac tatggccagc 4801 acttccgctg caccaattac ttggagcaaa tcgccaggca catcgagctg aagccggaga 4861 gttacgacat tgattttata cagagggtct gcggtttggc cgaacgcctg cgctaccatg 4921 atcccatcct gatcaatcgc gtctcttttg cgagtccccc aaatgccgcc agcaaggata 4981 gcgctgcgcc cgaggagaag gcctggctgc gtcagctgcg ctccctggcc gatgtgcagc 5041 cccagcagga gcaattgcaa ttgcatcatc aagtgcagca gcagcagcag gagcagaacg 5101 acatcgatca gcagtttgcc gaggtgaaca agcagttcag agagctgaac atgcagtacg 5161 atggtggcaa tctggagagc acgctgcaaa cgcaattgcc tccagtggag cagcagcagc 5221 agccagctca gtcagaggtg cctccgccgc aacaacaata ctatgaaccg ccaccagcag 5281 cagcagcagc agcagcccaa gtgccagcag aatcggatcc ctatggacag cagcagggat 5341 cctactacga tcccaatgca ggaatgcagc atcaatacga tcccaatgct gggatacagc 5401 accaatacga tccgaatacc gaggcccacc atcagtacga acatggccaa atagagcctg 5461 caagtgaggc ctaccaacca gcagcagatc cttcagctgc tcccgctggc tatggctatg 5521 attactggtc gggcacccag cagccaccgt atggcgatga gcctgcgtta aaggatgagg 5581 cggaggagga ggaggatgag cagcagatat tgcagcaggc acagcagcag cagcaattgc 5641 gcgtggccaa gcagcaacag gagcaacata ctcgcaccaa tggcgccgcc aacagcaaca 5701 acaatcgctt caagtcgaat gctttgaagc aggaaaaagg cagcagcatc actgcattgc 5761 gaaaaaggca ggaggcttcg agaacagcaa ctatagcggc ggcagcagca gcaattgccc 5821 aaataacacc agctaaagtt gcaacagcag cagcagcagc aacgacgacg gcagcaacat 5881 cggcaaaggc attcaatttg aatgatgtaa gtagcttttc ccacatacat aaacgacatc 5941 aagctaccag cagcagcagc agcaacaaca aaccagcaac agcaacagca gcagcagcaa 6001 ctttcacaac agtagctgct cttcctaatc aattaccaag ttgtagaaag tctaacagcc 6061 agaatagaac gtacttaggc acgccaaaaa cgctaaccac gcccacacgt ttcattgccg 6121 ccaaagcagc cacagttaca gccacgccca cagcgcccac cactttgacg accacgtcga 6181 cgtctctagg tgcccgggga tcgtccacga agcgggttaa ctttaatctg cccacaacaa 6241 tagctgaatc ggaacaggaa ttccagcatg agctgaactt tgaggaggcg gacgaggagc 6301 aggaagaggt ggaggaggac gaggaggaga acgccttggc tctggcgcag gccagaccaa 6361 gtgggcatct gtcgcgcaaa ccgcatattg tcttcaacgg cacctatccc attgacatgc 6421 ccctgacgca gagcaagagc agctcgtatg atccggaggc caatgcagat cgcggcgact 6481 tgcagcgcta taggaactac atgctccacg actatgttat cgatgaggat gccgagggcg 6541 aggagcaggc gcaagaggag caggaggagg acgagtatgc ggacgaggat ctattcccct 6601 atgcccacga cgcggatgag agcttcgatg atggcgatta ctatacgcac gagctgctca 6661 acaagtatgg gattataccg agcaaagagg gcgctcagag aacgccggct accgtggagg 6721 cagccaccat taccagcaac tcggcctcga agccgcagca tgtgtggtcc atggaggagc 6781 tgatagccaa tccggccata ccgctcaact acaagaaaat gtgcaccgag gtggagcaga 6841 gtctcagtcg atttgagagc tatctggata gcaagaagga gcaacagcag atgccaccgc 6901 ctttggccgc agtgcgcacc ttcgacatcg atgcacccac gcgccggggc caccggagca 6961 gcacttcatc cgcgaatgct ggcttggctc ttagatctaa gaagaaattg taaacaaact 7021 cagagaaaga aatgtagaaa agaaggagcc agtgcaacgc tgcttttact tcctccttct 7081 ttgttttttt ttgtaagctt tctgtacctg gacaagcgtc ttaactataa gtagtcctaa 7141 tgatgccccc aagcaatctc tgtaatcact aagccttata taccgataat aattgtgaga 7201 aagagttttt tgactgcgcc agtttatttg ccatgtttcc gttgttcatt cgattcgaac 7261 taacccataa ctactttgtt actaacccaa gcctaaacac tctgcctaag atctatgact 7321 actacttatg actaaaccga ttgcttctcg ccgaagacta atccaatgcc atttcttaac 7381 tccaacttca atttcgccat cc