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LOCUS XM_017149835 2136 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017149835 VERSION XM_017149835.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017149835.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2136 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2136 /gene="Mks1" /note="Meckel syndrome, type 1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108062958" CDS 60..2048 /gene="Mks1" /codon_start=1 /product="tectonic-like complex member Mks1" /protein_id="XP_017005324.2" /db_xref="GeneID:108062958" /translation="MQKGRDMKHTGVYRVSGNIGDLQLELKLRHISEWLPVPKFEYVG AQAANGHGQGHYPGSEEDFWQDCFIHVPQGDDSYGGKNRLGYYCSYYNVGYAGNAGQM VRRRRSPSTEGQEEEAAEEEEEEEGVEEVEVPSPSGGDRFYERNKELCSGAIATLRIS WQQKHFSQAELERHLHDPGGCASKLQRRYHNWALEAHELQLQQNQLEDGDPEPIRVRR RMRKSKRRPRNCSALANWTGNGLSSANMSDVSLLDDPDFAARTCLIHTLVDGDAEDVL PAEAEELHRQGLQLMYIYADLQQDTLLVSLRYDPAEGLLYVYPDFSGSAQDLDYVVQI ERDNDCRQLYAFGFENATPLVKLNEGGGSIPEEDPDPDPYPDSDLPEEATALEILDYY HRRRAAASERRSLLQFEMPPKRMRRICLLLELQEAQHFEYPNIHVRYYLRPPANTIHE GSDLQGATATCRNAGDLRLARLGHCWQVELLCEEQHRPEDLLHLYFEVISIDGWQRER CEGYAHYALSLTSALARDSVRLQCIRPVGNWLDALNRYFIGGRRLFDFEAYFDVHRQS EVHSRMDARKERGMTTTGSLLLRLQKLQQRQVDTAGQLHHFHLDLGANGESSDGDSDD EAKSGSKADTSRATTLDEVMAAFVEARERIELLLGAAS" misc_feature 1311..1742 /gene="Mks1" /note="Ciliary basal body-associated, B9 protein; Region: B9-C2; pfam07162" /db_xref="CDD:462108" ORIGIN 1 caaagtaggg ctggtatcca gtaaaaacaa aaataaaata tctagaatat ttggatatca 61 tgcaaaaagg aagggacatg aagcacacag gagtttatcg cgtgagcggc aatatcggag 121 atttgcagct ggaactgaag ctccgtcaca tcagcgaatg gctgccggtg ccgaaattcg 181 agtatgtggg agcccaggcg gccaacggac atgggcaggg ccattatccc ggatcggagg 241 aggatttctg gcaggactgc ttcatccacg tgccccaggg cgatgattcg tacggcggaa 301 agaatcgcct gggctactac tgcagttact ataatgtggg ttatgctgga aatgctggtc 361 agatggtgag gcgacgcagg agtccctcaa ccgagggaca ggaggaggag gcggcggagg 421 aggaggagga ggaggaggga gtggaggaag tagaggtccc aagcccctct ggcggcgacc 481 gcttctatga gagaaacaag gagctgtgca gcggggccat cgccacattg cgcatctcct 541 ggcagcagaa gcacttcagc caggcggaac tggagcgcca cctccacgat cccggtggct 601 gcgcctcgaa gctccagcga cgctaccaca actgggccct ggaagcccac gagctgcagc 661 tgcagcagaa tcagctcgag gatggggatc ccgaacccat tagagttcgc cgccggatgc 721 ggaagtcgaa gcgccggccg agaaactgct ctgccttggc caactggacg ggcaacgggc 781 tgtcctcggc caacatgtcg gatgtctcgc tgctcgacga tcccgacttt gcggcccgca 841 cctgcctcat ccacaccctg gtcgatggcg atgcggagga tgtgctgccc gccgaggcgg 901 aggagctgca tcggcagggc cttcagctga tgtacatcta tgcggatctg cagcaggaca 961 ctctgctggt cagcctgcgc tacgatcccg ccgagggtct gctctacgtg taccccgact 1021 ttagcggcag tgcccaggat ctggactatg tggtgcagat cgagcgggac aacgactgcc 1081 ggcagctgta cgcctttggc ttcgagaatg ccacgcccct ggtgaagcta aacgaaggcg 1141 gcgggagtat tccggaggag gatcctgatc ctgatcctta tcccgattct gatctccccg 1201 aagaagccac ggccttggag atcctggact actaccaccg ccggcgggcg gcggccagcg 1261 agcggcgcag tctgctgcag ttcgagatgc cgccgaagcg gatgaggcgg atctgcctgc 1321 tgctggaact gcaggaggcc cagcacttcg agtaccccaa catccatgtg cgctactatc 1381 tgaggccgcc ggcgaatacg atccatgagg gatcggacct gcagggagcc acggccacgt 1441 gccggaatgc cggcgacttg aggctggccc gactgggtca ctgctggcag gtggagctgc 1501 tctgcgagga gcaacaccgg ccggaagatt tgctgcacct gtacttcgag gtcatcagca 1561 tcgacggctg gcagcgggag cgctgcgagg gctatgccca ctatgccctc tcgctgacct 1621 ccgccttggc cagggactcc gttcggctgc agtgcatccg gccggtgggc aactggctgg 1681 atgccctcaa tcgctacttc atcggcggcc gtcgcctctt cgacttcgag gcctatttcg 1741 atgtccaccg ccagtcggaa gtgcacagcc gcatggatgc gaggaaggag cggggtatga 1801 ccaccacggg atccctgctg ctccggctgc agaagctgca gcagcggcag gtggacaccg 1861 ccggccagct gcaccacttc catctggacc tcggggcgaa cggcgagagc agcgatggcg 1921 acagcgatga tgaggccaag tccggctcga aggcggacac atccagggcc accaccttgg 1981 acgaggtgat ggccgccttc gtggaggcca gggagcggat cgagctgctg ctgggagccg 2041 ccagttgagg agagcaagca gttcccccat tatcatctgc atacttccgg gctgagattg 2101 ccatgtgtac taaaataaat tatggacgaa agaaac