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LOCUS XM_017148924 2219 bp mRNA linear INV 09-DEC-2024 (LOC108062314), transcript variant X2, mRNA. ACCESSION XM_017148924 VERSION XM_017148924.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017148924.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2219 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2219 /gene="LOC108062314" /note="uncharacterized LOC108062314; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108062314" CDS 140..2119 /gene="LOC108062314" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017004413.2" /db_xref="GeneID:108062314" /translation="MSHHMPRRTSEFRGTVLEDRGTADKRQTRATKRSTAALITPSSG QVNPRRRSAIPQPQPMNLERDRFTQMGVTPKRGLHHHRTAPSTAERPVAPHSDKKWVA ERAQQILEYLQDANPAALSISELYNRPGGLRHMTIKQFVSILNFLFQHIWRNRVTVGQ NHVEDITSAMQKLQYPYQVNKSWLVSPTTSHSFGHVILLLDFLLDFASSEEPGFPFME TSDQPSVHGESSQLQAIQLEEEVNALLFAEASKCFLFWDQELLEEQLRLQAETGDQVV SKKCDLPDRQALDRVIEELQKKLQVLEGSNDGNKLEQLIEEQEQLVRQLSECQAEVEQ QRNLDKRLAEQAEEQQAHLRQQAKYELRLEQAVSSQKYSAQQLKALQIKAADLENYSQ AYERQVKEVSELELHQQVMLSRAKQRQLDCVEGFNSHVRHLSMDPLIGNLMKAKQLDL SLPLNPQPEDIDERMQCLQLLGHLLQQQRQQNLERRQLFSQQVDQLKSPRIELEAEIG SLESQMLAHKQRLAKLEAGQRSRRDMAMQHQRQLLEDQTDQLGRVEQLEQRKQQAAEQ LQASVQRNEDLLTAGELHQEEDHQARNASLDNCELKLAGAEEELQALQTKLTVSQAKL EVAEQREKSLQLASFEPVLQAIKQFQSSRGPKEDR" misc_feature 284..715 /gene="LOC108062314" /note="HEC/Ndc80p family; Region: Ndc80_HEC; pfam03801" /db_xref="CDD:461058" misc_feature <1013..>2083 /gene="LOC108062314" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" polyA_site 2219 /gene="LOC108062314" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccacactcga cttaacgctt ccatggcccc aattatataa gaccggagcc cgaagaatcg 61 aggagggcta agcgatctcg cgacttgcga ctcgatttcc aagttgtttg acagcatttt 121 ttgtcgtatc taaaccaaga tgtcgcacca catgccccgt cgcaccagcg agttccgcgg 181 cactgtgctg gaggatcgcg gcaccgccga caagcggcag accagggcca ccaagcgcag 241 cacagcggcg ctcatcactc cctcctccgg ccaggtgaat ccccgcagac gctcggccat 301 cccgcagccg cagccgatga acctggagcg ggatcgcttc acccagatgg gcgtgacgcc 361 caagcgcggc ctccaccacc accgcacggc gccctcgacg gcggaacgcc cggttgcccc 421 gcattcggac aaaaagtggg tggcggagcg ggcccagcag atcctggagt atctgcagga 481 cgccaatccg gccgcgctga gcatctcgga gctgtacaat cggcccggcg gtctgcggca 541 catgaccatc aagcagtttg tgtcgatcct gaactttctg ttccagcaca tctggcggaa 601 tcgggtgacc gtgggccaga atcacgtcga ggacatcacg agcgccatgc agaagctgca 661 gtatccctac caggtcaaca aatcctggct ggtgtcgccc accacttcgc attcctttgg 721 ccacgtcatc ctgctgctgg actttctcct cgactttgcc tcctcggagg agcccgggtt 781 ccccttcatg gagaccagcg atcagcccag cgtgcacggc gaatcctcgc agctgcaggc 841 catccagctg gaggaggagg tcaatgcgct gctcttcgcc gaggccagca aatgcttcct 901 cttctgggac caggagctgc tcgaggagca gctcaggctg caggcggaga cgggggatca 961 ggtggtgagc aagaagtgcg atttgccgga tcgccaggcg ctggatcggg tgattgagga 1021 gctgcaaaag aagctacaag tcctggaggg tagtaacgat ggaaataagc tggagcagct 1081 gatcgaggag caggagcagc tcgtccggca gctcagcgaa tgccaggcgg aggtggagca 1141 gcagcgaaac ctcgacaaac ggctggccga acaggcggag gagcagcagg cgcatctccg 1201 ccagcaggcc aagtacgagc tgcgattgga gcaggcggtc tccagccaaa agtactccgc 1261 ccagcagcta aaagcgctgc agataaaagc cgccgacttg gagaactatt cgcaggccta 1321 cgagcggcag gtgaaggagg tttccgagct ggagctccac cagcaggtga tgctatcccg 1381 cgccaagcaa aggcagctcg actgcgtgga gggttttaac tcgcatgtgc ggcatctgag 1441 catggatccc ttgatcggca acctgatgaa ggccaagcag ttggacctct cgctgccgct 1501 caatccgcag ccggaggaca tcgacgagcg gatgcagtgc ctccagctgc tgggccatct 1561 gctgcagcag cagcgacagc agaatctgga gcggcggcag ttgttcagtc agcaggtgga 1621 tcagttgaag agcccgcgca tcgaattgga ggcggaaatc ggcagcttgg agtcacaaat 1681 gctggcgcac aagcagcggc tggccaaatt ggaggcgggc cagcgcagca ggcgcgacat 1741 ggccatgcag caccagcggc agctgctcga ggatcagacc gatcagctcg gccgagtgga 1801 gcagttggag cagcggaaac agcaggcggc ggagcagctg caagcgagtg tgcagcggaa 1861 cgaggatctc ctaaccgccg gcgagcttca ccaggaggag gatcaccagg cacgcaacgc 1921 tagcctcgat aattgcgaac tgaagctggc cggagcggag gaggagctgc aggcgctcca 1981 aaccaagctc accgtcagcc aggccaagct ggaggtggcc gagcagcggg agaaatccct 2041 ccagctggcc tcctttgagc ccgttctgca ggccatcaag cagtttcagt cctctcgagg 2101 gccaaaggag gatcgttagt ccattttttt ggttttaaac tgtaattgaa atgtttttat 2161 tgaataggtg aattaataaa agagcctgaa aaaatatcag gcgagttttc ccttcaaaa