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LOCUS XM_017148922 5434 bp mRNA linear INV 09-DEC-2024 domain-containing protein RhoGAP15B (RhoGAP15B), transcript variant X2, mRNA. ACCESSION XM_017148922 VERSION XM_017148922.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017148922.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5434 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5434 /gene="RhoGAP15B" /note="RhoGAP_ARAP and RA_ARAPs domain-containing protein RhoGAP15B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108062313" CDS 561..4910 /gene="RhoGAP15B" /codon_start=1 /product="uncharacterized protein RhoGAP15B isoform X2" /protein_id="XP_017004411.2" /db_xref="GeneID:108062313" /translation="MEQARPVPAPRRLYPELRPANYENIEIRTPQANNNNNNSNNNNN IKKLNINAENLHGNCGEKKLPSSGQSKLILQENNIGDSQPIYGPDANENVQEPLYAIP KPAPRQRAMPIEDQDQDPDQNPDEVPLRILRAAPQVPPKPLNNDPRSSICSEVSSSRA GEDRLDREESRYASNVSLDCSESSQSGKFKSQSPGNLLRSLGTTSKLLGEAIGERITF KAKGAKKRLDRNLKSSTEAISTISADAGRSLKHAGKRFGSNFSLGRSRADKAEQQQQQ DQAADEMDLDRRRTMPNTEVFSAIQFSSPLNRNGGLSDLREGKLPKEEQKKKEQEDQQ DDDGCYEVPKAQGKPPSYDEALRSRSSPPMPAFPPPRLSQQPEQFRLDALQPPVRQKR RKNYEHIELRRQPVDSAQLEELNRAAELAEREESLLISAKNAEEEAKAPKPERSDSWE FYNEDNEEEEDEDEEEDEPLYANQEATYGRLFESSSRSNVLTPNQVVEQLSCISEDSE LDGAVGGVAMPLPQSLIEEFDPLCGKSSSGSSTLARSNKSNELLLLEHLLEEDTYGTV KAEQDDVSMCTSEEEPASSKSPQIVHQNARLLSESMENMLDEQRARPYLSRMPAEAEA EERPKEGSIASRNRTNWFVPEKDKPTTIEGDSPPTYLEAIGSGKESSSPGSQENRSLF RQTMNAISNVKLRMDAMKRKASFRAQSGNQRQSEVRVALQMVPRPSLSPLLVRYEGPL VRFPSGVVEDILKEMQNRKAILRERQFQTFLDQEMKTPREMIPLDAITTLQCVSNSRV TDTATHFYCFEITTSQPKNGGGANGGAGGGMDSMSSNPNLLMTSSSSGNVKQQRVSHL YGVGKESERGVWMQKILESLTNSLPVKYTCHYYRAGWCYLKNSITSEWSGTWLVLRKS QRRLIFVTEANGNVEKMDLRKARCIVLKESDDSIDNLHVESGPMLMIDCPPYAVYMIM SSARETKIWRHIIREVAHNNGFSLGDQQLTRYDVPVIVDKCINFVYIHGSMSEGIYRK SGSENSMHKLMSAFRADAFNVEITRNEYNEHDVANVLKRFMRDLPERLLGKLTDSFVF VTELAVATEKIPIYRELLGRLSAIERETLRKIVGHLVFISSQQAKNKMSVQNLTMIWG PTLLAKKSDELIYSQKEADVLSDLIVLYKNLFPCSADEMKREQAMLACLQKYYAAAET LKDAVKQSGDIKIWISLNPNPDNKTEEKTQVNATISPTKTAYELCREYSAKMQLPTHQ LTLYEVILNDSLERPLHHDTRVFDVILNWSYWPEEDRKHNYLVVRPVEMLREIQRAVK NLATVTPGKELRFADSRTKTFKTLQCELRDGKIVVSKKDKSDKTTIVREVFLQSSTAY LGCERKRDFPWSWAITFVERTQAQIMRSRDAPFIGHVLAGSEWVDRTIWYSSIWYCLH GDNILPPAEIIIK" misc_feature 3534..4082 /gene="RhoGAP15B" /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in ARAPs. ARAPs (also known as centaurin deltas) contain, besides the RhoGAP domain, an Arf GAP, ankyrin repeat ras-associating, and PH domains. Since their ArfGAP activity...; Region: RhoGAP_ARAP; cd04385" /db_xref="CDD:239850" misc_feature order(3645..3647,3762..3764,3774..3776,3978..3980, 3987..3992,4050..4052) /gene="RhoGAP15B" /note="putative GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:239850" misc_feature 3645..3647 /gene="RhoGAP15B" /note="catalytic residue [active]" /db_xref="CDD:239850" misc_feature 4194..4499 /gene="RhoGAP15B" /note="Ras-associating (RA) domain found in Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing proteins ARAP1, ARAP2, ARAP3, and similar proteins; Region: RA_ARAPs; cd17113" /db_xref="CDD:340633" polyA_site 5434 /gene="RhoGAP15B" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcatactgcc caccgttaat tttattcgat cgctcggatc gggtgggaaa atcagaaaat 61 cggaaaatcg cggcttcaac tggcggatcg ttttggctag gggacaaaga atcttgttct 121 ggtcatgatt ttgccattcg cgaattgtca acttttgttg agcgacaaca acaacaacag 181 caacggcgat cgcgagagag agagagacgg atgcaaacaa tgcgtacgtg tgcgcgtgtg 241 tgagtgagac attccacaag tgattcattc cgcaaaaata ataataataa acaataaata 301 aataaactgg ggcgaaatgt ttgtggaaat gtgtcaacaa gttgttgtat caatatgtgt 361 ggctaatcga aatcggtttg atttttaaga gacactttac ttttcgccct ctctctctct 421 cactctttgt tttcgttttt tattgttgtg ccgtgtgagt gtgcgtgtgt gttgtgaata 481 taaaacacaa tttaaagtta accacgcata aattgcatac gaaatttcga caaggaaaaa 541 gcgaaaggtt ctatataacc atggagcagg cgcgtcctgt gcccgccccc cgccgtcttt 601 atccggagct gcgtcccgcc aactatgaga atatcgagat ccgcacaccc caagccaaca 661 ataataataa taacagtaat aataataata atatcaagaa gctcaacata aatgcggaga 721 atctgcacgg caattgtggc gaaaagaagc tgccgtcgag tggccaaagc aagttgattc 781 tgcaggaaaa caatatagga gatagtcagc cgatctatgg tccggatgcg aatgagaatg 841 tccaggagcc cttgtatgcc atcccaaagc cagcgccgcg ccagcgagcg atgccaatcg 901 aggatcagga tcaggatcca gatcaaaatc cagatgaagt gccgctgagg attctgcggg 961 cggcgccaca agttccgccc aagccactca acaatgaccc acgatcctcg atctgcagcg 1021 aggtgtcctc cagcagagct ggcgaggatc ggctggatcg ggaggaatcg cggtacgcgt 1081 ccaacgtttc gctcgactgc agcgagagct cccagagcgg caagttcaag tcgcagtcac 1141 ccggcaacct gctgcgatcg ctgggcacca cctccaagct cctaggcgaa gccatcggcg 1201 agcggatcac gttcaaggcc aagggagcca agaagcggct ggacaggaac ctcaagagct 1261 ccacggaggc gatcagcacg atcagcgcgg acgccggtcg gagtttgaag cacgcgggca 1321 agagattcgg ctccaatttc agtctgggca ggagcagggc ggacaaggca gagcagcagc 1381 agcagcagga tcaggcagcc gacgaaatgg atctggacag gcggcggacg atgcccaata 1441 cggaggtctt cagtgctatt cagttctcga gccccctgaa ccgcaacgga ggtctctccg 1501 atctgcggga aggcaagctg cccaaggagg agcagaagaa gaaggagcag gaggatcagc 1561 aggacgacga cggctgctat gaggtgccca aggcgcaggg caagccgccc agctacgacg 1621 aggctctgcg ctccaggagc agcccgccca tgcccgcctt tccgccgccc cgcctctccc 1681 agcagccgga acagttccgt ttggacgcac tgcagccgcc ggtgcggcag aagcgtcgca 1741 agaactacga gcacatcgag ctgcgccgcc agcccgtcga ttccgcccag ctggaggagc 1801 tcaatcgggc ggcggagctt gcggagcgcg aggaatccct gctgatctcg gccaagaatg 1861 ccgaggagga ggccaaggca cccaagccgg aacgcagcga ctcctgggag ttctacaatg 1921 aagataacga ggaggaggag gatgaggatg aagaggagga cgagccgttg tacgccaacc 1981 aggaggccac ctacggcagg ctcttcgaga gcagcagtcg cagcaatgtg ctcacaccca 2041 accaggtggt ggagcagctg tcctgcatca gcgaggattc agagctagat ggagccgttg 2101 gcggtgtggc gatgcccctc ccgcaatcgc tcattgagga attcgatccg ctgtgcggga 2161 agagctcctc cggctcctcc acgctggcca ggtcgaacaa gagcaacgag ctgctgctgc 2221 tggagcatct gctcgaggag gacacctacg gcacggtgaa ggcggagcag gatgacgtga 2281 gcatgtgcac ctccgaggag gagccagcca gctcgaagtc gccgcagatc gtccaccaga 2341 atgcccggct gctgagcgag agcatggaga acatgctgga cgagcagcgg gcgcgtccct 2401 atctcagtcg aatgccagcg gaggcggagg cggaggagag acccaaggaa gggtccattg 2461 cctcgcggaa tcgcaccaat tggtttgtgc ccgagaagga caaaccaaca accatcgagg 2521 gcgacagtcc acccacttac ctggaggcca ttggaagtgg caaggaatca tcatctcctg 2581 gcagtcaaga gaatcgctcg ctcttccgcc agaccatgaa cgccatctcc aatgtgaagc 2641 tgcgcatgga tgcgatgaag cggaaggcca gcttccgcgc tcaatcggga aatcagcggc 2701 aatcggaggt tcgggtggcc ctccagatgg tcccgcgtcc cagtctgtcg cccctgctcg 2761 tccgctacga gggtccgctg gtgcgctttc cctcgggcgt cgtcgaggac attctgaagg 2821 agatgcagaa ccgcaaggcc atactgaggg agcgacaatt ccagaccttc ctcgaccagg 2881 agatgaagac gccgcgcgag atgatacctt tggatgccat caccacgctg cagtgcgtga 2941 gcaatagccg ggtcacggat acggccacac atttctactg cttcgagatc accacgtcgc 3001 agccgaagaa cggaggagga gcgaatggag gagcaggagg gggcatggac agcatgtcct 3061 ccaatcccaa tctactcatg accagcagct cgtcgggcaa tgtaaagcag cagagggtat 3121 cgcatttgta tggcgtcggc aaggagtcgg agcgcggcgt ctggatgcag aagatcctcg 3181 agagcctcac gaacagcctg ccggtgaagt acacgtgcca ctactatcgc gccggctggt 3241 gttacctcaa gaactccatc acctcggagt ggagcggcac ctggctggtg cttcgcaaga 3301 gccagcgacg cctgatcttc gtcaccgagg ccaatggcaa tgtggagaag atggatctgc 3361 gcaaggcccg ctgcatagtg ctgaaggaga gcgacgactc gattgacaat ctgcacgtgg 3421 agagcggtcc catgctgatg atcgactgcc cgccgtacgc ggtctatatg atcatgagct 3481 ccgctcggga gacgaagatc tggcggcaca tcatccgcga ggtggcccac aacaatggct 3541 tctcgctggg cgaccagcag ctgacgcgct acgatgtgcc cgtgatagtg gacaagtgca 3601 tcaactttgt gtacatccac ggctccatgt cggagggcat ttaccgcaag tccggctcgg 3661 agaactccat gcacaagctg atgagcgcct tccgggcgga cgccttcaat gtggagatca 3721 cccggaacga gtacaacgag cacgacgtgg ccaatgtctt gaagcgcttc atgcgcgacc 3781 tgcccgaacg gctgctgggc aagctgacgg atagctttgt cttcgtcacg gagctggcgg 3841 tggccaccga gaagataccg atctaccggg agctcctcgg ccgactctcg gccatcgagc 3901 gcgaaacgct gcgcaagatt gtgggccacc tggtgttcat cagttcgcag caggccaaga 3961 acaagatgag cgtccagaat ctgaccatga tctggggtcc cacgctgctg gccaagaaga 4021 gcgacgagct tatctactcg cagaaggagg ccgatgttct aagcgatctg atagtgctct 4081 acaagaatct attcccctgc agtgccgatg aaatgaaacg ggagcaggcc atgctggcat 4141 gtctgcagaa gtattatgcg gctgccgaga cgctaaaaga tgcagtgaaa cagtccgggg 4201 acatcaagat ctggatcagc ctgaatccca atcctgacaa caaaacagag gagaagacgc 4261 aagtgaacgc caccatttcg ccgacgaaga ccgcctacga gctgtgccgc gagtactcgg 4321 ccaagatgca gctgcccacc caccagttga ccctgtacga ggtgattctc aacgacagcc 4381 tggagcgacc gctgcaccac gacaccaggg tgttcgatgt gatcctcaac tggtcctatt 4441 ggccggagga ggatcgcaag cacaactatt tggtggtgcg accggtcgag atgctgcgcg 4501 aaatccagcg ggcggtgaag aatctggcca ccgtgacgcc cggcaaggag ctgcgcttcg 4561 ccgactcgcg aacgaagacc ttcaagacgc tgcagtgcga gctgcgggac gggaagatag 4621 tggtgtccaa gaaggacaag agcgacaaga cgaccattgt gcgggaggtc ttcctccaga 4681 gcagcacggc ctatttgggc tgcgagcgca agcgcgactt cccctggagc tgggccatca 4741 cctttgtgga gcgcacgcag gcgcagatca tgaggtcacg cgatgctccg ttcattggcc 4801 acgttttggc gggcagcgag tgggtggatc gaaccatctg gtactccagc atctggtact 4861 gcctgcacgg ggacaacatc ctgccgccgg cggagatcat cattaagtag atctagtagt 4921 tttccacttc ttgtgcattt ttctgtagat attctgaatt tatttgcaat aattagggca 4981 atatatccaa tatttttacg agagttttcc gatatatcga ataggtttag ccaacgaaag 5041 tactactatt ttttttttta caacattttt gtgtatataa ccatgttctc tcaaaaccca 5101 aattgtacat aaccttaagg aatttaaatt tgtatcatta agtatatgcc atttgtcttc 5161 aacatagctc gttttctgga ctatctagcg ttttagtaga taaaacgaga aactaactaa 5221 cagttagaca cggccacgca gagcatcaaa ttttagccta gttaatgttt tcgtaatatc 5281 tgtaatgtaa tttttatacg tactcgtaat cgacccaatt ggttttgcat ttatgtattg 5341 tgtttattta catacgaagc cattcaattg attgtctaga caacccagag tttaatagta 5401 aaaaatataa ctatttacaa atatttcgtg agaa