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LOCUS XM_017148921 5549 bp mRNA linear INV 09-DEC-2024 domain-containing protein RhoGAP15B (RhoGAP15B), transcript variant X1, mRNA. ACCESSION XM_017148921 VERSION XM_017148921.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017148921.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5549 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5549 /gene="RhoGAP15B" /note="RhoGAP_ARAP and RA_ARAPs domain-containing protein RhoGAP15B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108062313" CDS 562..5025 /gene="RhoGAP15B" /codon_start=1 /product="uncharacterized protein RhoGAP15B isoform X1" /protein_id="XP_017004410.2" /db_xref="GeneID:108062313" /translation="MEQARPVPAPRRLYPELRPANYENIEIRTPQANNNNNNSNNNNN IKKLNINAENLHGNCGEKKLPSSGQSKLILQENNIGDSQPIYGPDANENVQEPLYAIP KPAPRQRAMPIEDQDQDPDQNPDEVPLRILRAAPQVPPKPLNNDPRSSICSEVSSSRA GEDRLDREESRYASNVSLDCSESSQSGKFKSQSPGYVDAINDSTDPNGDQNRDRESSS SAEQSSGSQDGDDDNNLLRSLGTTSKLLGEAIGERITFKAKGAKKRLDRNLKSSTEAI STISADAGRSLKHAGKRFGSNFSLGRSRADKAEQQQQQDQAADEMDLDRRRTMPNTEV FSAIQFSSPLNRNGGLSDLREGKLPKEEQKKKEQEDQQDDDGCYEVPKAQGKPPSYDE ALRSRSSPPMPAFPPPRLSQQPEQFRLDALQPPVRQKRRKNYEHIELRRQPVDSAQLE ELNRAAELAEREESLLISAKNAEEEAKAPKPERSDSWEFYNEDNEEEEDEDEEEDEPL YANQEATYGRLFESSSRSNVLTPNQVVEQLSCISEDSELDGAVGGVAMPLPQSLIEEF DPLCGKSSSGSSTLARSNKSNELLLLEHLLEEDTYGTVKAEQDDVSMCTSEEEPASSK SPQIVHQNARLLSESMENMLDEQRARPYLSRMPAEAEAEERPKEGSIASRNRTNWFVP EKDKPTTIEGDSPPTYLEAIGSGKESSSPGSQENRSLFRQTMNAISNVKLRMDAMKRK ASFRAQSGNQRQSEVRVALQMVPRPSLSPLLVRYEGPLVRFPSGVVEDILKEMQNRKA ILRERQFQTFLDQEMKTPREMIPLDAITTLQCVSNSRVTDTATHFYCFEITTSQPKNG GGANGGAGGGMDSMSSNPNLLMTSSSSGNVKQQRVSHLYGVGKESERGVWMQKILESL TNSLPVKYTCHYYRAGWCYLKNSITSEWSGTWLVLRKSQRRLIFVTEANGNVEKMDLR KARCIVLKESDDSIDNLHVESGPMLMIDCPPYAVYMIMSSARETKIWRHIIREVAHNN GFSLGDQQLTRYDVPVIVDKCINFVYIHGSMSEGIYRKSGSENSMHKLMSAFRADAFN VEITRNEYNEHDVANVLKRFMRDLPERLLGKLTDSFVFVTELAVATEKIPIYRELLGR LSAIERETLRKIVGHLVFISSQQAKNKMSVQNLTMIWGPTLLAKKSDELIYSQKEADV LSDLIVLYKNLFPCSADEMKREQAMLACLQKYYAAAETLKDAVKQSGDIKIWISLNPN PDNKTEEKTQVNATISPTKTAYELCREYSAKMQLPTHQLTLYEVILNDSLERPLHHDT RVFDVILNWSYWPEEDRKHNYLVVRPVEMLREIQRAVKNLATVTPGKELRFADSRTKT FKTLQCELRDGKIVVSKKDKSDKTTIVREVFLQSSTAYLGCERKRDFPWSWAITFVER TQAQIMRSRDAPFIGHVLAGSEWVDRTIWYSSIWYCLHGDNILPPAEIIIK" misc_feature 3649..4197 /gene="RhoGAP15B" /note="RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in ARAPs. ARAPs (also known as centaurin deltas) contain, besides the RhoGAP domain, an Arf GAP, ankyrin repeat ras-associating, and PH domains. Since their ArfGAP activity...; Region: RhoGAP_ARAP; cd04385" /db_xref="CDD:239850" misc_feature order(3760..3762,3877..3879,3889..3891,4093..4095, 4102..4107,4165..4167) /gene="RhoGAP15B" /note="putative GTPase interaction site [polypeptide binding]; other site" /db_xref="CDD:239850" misc_feature 3760..3762 /gene="RhoGAP15B" /note="catalytic residue [active]" /db_xref="CDD:239850" misc_feature 4309..4614 /gene="RhoGAP15B" /note="Ras-associating (RA) domain found in Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing proteins ARAP1, ARAP2, ARAP3, and similar proteins; Region: RA_ARAPs; cd17113" /db_xref="CDD:340633" polyA_site 5549 /gene="RhoGAP15B" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggcatactgc ccaccgttaa ttttattcga tcgctcggat cgggtgggaa aatcagaaaa 61 tcggaaaatc gcggcttcaa ctggcggatc gttttggcta ggggacaaag aatcttgttc 121 tggtcatgat tttgccattc gcgaattgtc aacttttgtt gagcgacaac aacaacaaca 181 gcaacggcga tcgcgagaga gagagagacg gatgcaaaca atgcgtacgt gtgcgcgtgt 241 gtgagtgaga cattccacaa gtgattcatt ccgcaaaaat aataataata aacaataaat 301 aaataaactg gggcgaaatg tttgtggaaa tgtgtcaaca agttgttgta tcaatatgtg 361 tggctaatcg aaatcggttt gatttttaag agacacttta cttttcgccc tctctctctc 421 tcactctttg ttttcgtttt ttattgttgt gccgtgtgag tgtgcgtgtg tgttgtgaat 481 ataaaacaca atttaaagtt aaccacgcat aaattgcata cgaaatttcg acaaggaaaa 541 agcgaaaggt tctatataac catggagcag gcgcgtcctg tgcccgcccc ccgccgtctt 601 tatccggagc tgcgtcccgc caactatgag aatatcgaga tccgcacacc ccaagccaac 661 aataataata ataacagtaa taataataat aatatcaaga agctcaacat aaatgcggag 721 aatctgcacg gcaattgtgg cgaaaagaag ctgccgtcga gtggccaaag caagttgatt 781 ctgcaggaaa acaatatagg agatagtcag ccgatctatg gtccggatgc gaatgagaat 841 gtccaggagc ccttgtatgc catcccaaag ccagcgccgc gccagcgagc gatgccaatc 901 gaggatcagg atcaggatcc agatcaaaat ccagatgaag tgccgctgag gattctgcgg 961 gcggcgccac aagttccgcc caagccactc aacaatgacc cacgatcctc gatctgcagc 1021 gaggtgtcct ccagcagagc tggcgaggat cggctggatc gggaggaatc gcggtacgcg 1081 tccaacgttt cgctcgactg cagcgagagc tcccagagcg gcaagttcaa gtcgcagtca 1141 cccgggtacg tagacgccat caacgactca acggatccga acggggatca gaatcgggat 1201 cgggagtcct cttcctccgc agaacagtcc tccggcagcc aagatggcga cgatgacaac 1261 aacctgctgc gatcgctggg caccacctcc aagctcctag gcgaagccat cggcgagcgg 1321 atcacgttca aggccaaggg agccaagaag cggctggaca ggaacctcaa gagctccacg 1381 gaggcgatca gcacgatcag cgcggacgcc ggtcggagtt tgaagcacgc gggcaagaga 1441 ttcggctcca atttcagtct gggcaggagc agggcggaca aggcagagca gcagcagcag 1501 caggatcagg cagccgacga aatggatctg gacaggcggc ggacgatgcc caatacggag 1561 gtcttcagtg ctattcagtt ctcgagcccc ctgaaccgca acggaggtct ctccgatctg 1621 cgggaaggca agctgcccaa ggaggagcag aagaagaagg agcaggagga tcagcaggac 1681 gacgacggct gctatgaggt gcccaaggcg cagggcaagc cgcccagcta cgacgaggct 1741 ctgcgctcca ggagcagccc gcccatgccc gcctttccgc cgccccgcct ctcccagcag 1801 ccggaacagt tccgtttgga cgcactgcag ccgccggtgc ggcagaagcg tcgcaagaac 1861 tacgagcaca tcgagctgcg ccgccagccc gtcgattccg cccagctgga ggagctcaat 1921 cgggcggcgg agcttgcgga gcgcgaggaa tccctgctga tctcggccaa gaatgccgag 1981 gaggaggcca aggcacccaa gccggaacgc agcgactcct gggagttcta caatgaagat 2041 aacgaggagg aggaggatga ggatgaagag gaggacgagc cgttgtacgc caaccaggag 2101 gccacctacg gcaggctctt cgagagcagc agtcgcagca atgtgctcac acccaaccag 2161 gtggtggagc agctgtcctg catcagcgag gattcagagc tagatggagc cgttggcggt 2221 gtggcgatgc ccctcccgca atcgctcatt gaggaattcg atccgctgtg cgggaagagc 2281 tcctccggct cctccacgct ggccaggtcg aacaagagca acgagctgct gctgctggag 2341 catctgctcg aggaggacac ctacggcacg gtgaaggcgg agcaggatga cgtgagcatg 2401 tgcacctccg aggaggagcc agccagctcg aagtcgccgc agatcgtcca ccagaatgcc 2461 cggctgctga gcgagagcat ggagaacatg ctggacgagc agcgggcgcg tccctatctc 2521 agtcgaatgc cagcggaggc ggaggcggag gagagaccca aggaagggtc cattgcctcg 2581 cggaatcgca ccaattggtt tgtgcccgag aaggacaaac caacaaccat cgagggcgac 2641 agtccaccca cttacctgga ggccattgga agtggcaagg aatcatcatc tcctggcagt 2701 caagagaatc gctcgctctt ccgccagacc atgaacgcca tctccaatgt gaagctgcgc 2761 atggatgcga tgaagcggaa ggccagcttc cgcgctcaat cgggaaatca gcggcaatcg 2821 gaggttcggg tggccctcca gatggtcccg cgtcccagtc tgtcgcccct gctcgtccgc 2881 tacgagggtc cgctggtgcg ctttccctcg ggcgtcgtcg aggacattct gaaggagatg 2941 cagaaccgca aggccatact gagggagcga caattccaga ccttcctcga ccaggagatg 3001 aagacgccgc gcgagatgat acctttggat gccatcacca cgctgcagtg cgtgagcaat 3061 agccgggtca cggatacggc cacacatttc tactgcttcg agatcaccac gtcgcagccg 3121 aagaacggag gaggagcgaa tggaggagca ggagggggca tggacagcat gtcctccaat 3181 cccaatctac tcatgaccag cagctcgtcg ggcaatgtaa agcagcagag ggtatcgcat 3241 ttgtatggcg tcggcaagga gtcggagcgc ggcgtctgga tgcagaagat cctcgagagc 3301 ctcacgaaca gcctgccggt gaagtacacg tgccactact atcgcgccgg ctggtgttac 3361 ctcaagaact ccatcacctc ggagtggagc ggcacctggc tggtgcttcg caagagccag 3421 cgacgcctga tcttcgtcac cgaggccaat ggcaatgtgg agaagatgga tctgcgcaag 3481 gcccgctgca tagtgctgaa ggagagcgac gactcgattg acaatctgca cgtggagagc 3541 ggtcccatgc tgatgatcga ctgcccgccg tacgcggtct atatgatcat gagctccgct 3601 cgggagacga agatctggcg gcacatcatc cgcgaggtgg cccacaacaa tggcttctcg 3661 ctgggcgacc agcagctgac gcgctacgat gtgcccgtga tagtggacaa gtgcatcaac 3721 tttgtgtaca tccacggctc catgtcggag ggcatttacc gcaagtccgg ctcggagaac 3781 tccatgcaca agctgatgag cgccttccgg gcggacgcct tcaatgtgga gatcacccgg 3841 aacgagtaca acgagcacga cgtggccaat gtcttgaagc gcttcatgcg cgacctgccc 3901 gaacggctgc tgggcaagct gacggatagc tttgtcttcg tcacggagct ggcggtggcc 3961 accgagaaga taccgatcta ccgggagctc ctcggccgac tctcggccat cgagcgcgaa 4021 acgctgcgca agattgtggg ccacctggtg ttcatcagtt cgcagcaggc caagaacaag 4081 atgagcgtcc agaatctgac catgatctgg ggtcccacgc tgctggccaa gaagagcgac 4141 gagcttatct actcgcagaa ggaggccgat gttctaagcg atctgatagt gctctacaag 4201 aatctattcc cctgcagtgc cgatgaaatg aaacgggagc aggccatgct ggcatgtctg 4261 cagaagtatt atgcggctgc cgagacgcta aaagatgcag tgaaacagtc cggggacatc 4321 aagatctgga tcagcctgaa tcccaatcct gacaacaaaa cagaggagaa gacgcaagtg 4381 aacgccacca tttcgccgac gaagaccgcc tacgagctgt gccgcgagta ctcggccaag 4441 atgcagctgc ccacccacca gttgaccctg tacgaggtga ttctcaacga cagcctggag 4501 cgaccgctgc accacgacac cagggtgttc gatgtgatcc tcaactggtc ctattggccg 4561 gaggaggatc gcaagcacaa ctatttggtg gtgcgaccgg tcgagatgct gcgcgaaatc 4621 cagcgggcgg tgaagaatct ggccaccgtg acgcccggca aggagctgcg cttcgccgac 4681 tcgcgaacga agaccttcaa gacgctgcag tgcgagctgc gggacgggaa gatagtggtg 4741 tccaagaagg acaagagcga caagacgacc attgtgcggg aggtcttcct ccagagcagc 4801 acggcctatt tgggctgcga gcgcaagcgc gacttcccct ggagctgggc catcaccttt 4861 gtggagcgca cgcaggcgca gatcatgagg tcacgcgatg ctccgttcat tggccacgtt 4921 ttggcgggca gcgagtgggt ggatcgaacc atctggtact ccagcatctg gtactgcctg 4981 cacggggaca acatcctgcc gccggcggag atcatcatta agtagatcta gtagttttcc 5041 acttcttgtg catttttctg tagatattct gaatttattt gcaataatta gggcaatata 5101 tccaatattt ttacgagagt tttccgatat atcgaatagg tttagccaac gaaagtacta 5161 ctattttttt ttttacaaca tttttgtgta tataaccatg ttctctcaaa acccaaattg 5221 tacataacct taaggaattt aaatttgtat cattaagtat atgccatttg tcttcaacat 5281 agctcgtttt ctggactatc tagcgtttta gtagataaaa cgagaaacta actaacagtt 5341 agacacggcc acgcagagca tcaaatttta gcctagttaa tgttttcgta atatctgtaa 5401 tgtaattttt atacgtactc gtaatcgacc caattggttt tgcatttatg tattgtgttt 5461 atttacatac gaagccattc aattgattgt ctagacaacc cagagtttaa tagtaaaaaa 5521 tataactatt tacaaatatt tcgtgagaa