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LOCUS XM_017148902 2173 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017148902 VERSION XM_017148902.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017148902.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2173 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2173 /gene="r-cup" /note="ryder cup; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108062299" CDS 136..1917 /gene="r-cup" /codon_start=1 /product="uncharacterized protein r-cup" /protein_id="XP_017004391.2" /db_xref="GeneID:108062299" /translation="MKDSNLAVPAANQRPWETIDWPAEQQRWIHRSWGQYFARMRKNS FAHTYFDRCIGEEHEHEVLDHKALYLRSKFQRSVALPLGALADSLRATEASEVWNANV SMELADALYDLNRFEDNKSLLHENVRRHAGTAMKAFENRILLVDENLKDCTGYSLANF FMEHSSQLPGFYEHQQEELRKADKRPLWKILKERNECDVQSSRIRREEMLSPLESERR RRKTKIYYQNYLGRNWTDFIFLKTLRRNPNCLLNNNFGSSPQITENLEYSFRRLKTFT RMLQARSPMYNEYFQRNPRMEARMRDSNLFRIQYQTRRNMQSILRTIQVLRKKNDIKR LRKFVEDVMGNYVVIKTNRLMPWKAEFMNEVYNHLGLSLCQGYRLPSTRVTPYDKGAM CHLLNIPSAKPLEHSEFIFGDRSTYSYAGPDKQSTDRLADQNYIEYLEKRLLFARLPI ERSYLLHELADRYMQKNHFVQSLSYAQKAIEEARMCNSRIWEFLGTMLMAKSHAVLHK YERQTEVLNAAYQLATQLKSPQLCTFIELCRMLNKDYITLRKMSQLVTSKRLRTKISN RSSFFSSPNYSPNFSEIKKQEADLLTA" ORIGIN 1 ttaagttcat caccctgtac tcatgatttt tccttcattt tcatttcagt tttaggcgag 61 acaaattcgt tttgttttca ttttttgtag ttatttttta ttacctcctt tttacttgac 121 cgacgacgac gaaggatgaa ggactcgaat ctggcggtgc cggcggcgaa tcagcggccc 181 tgggagacca tcgactggcc ggcggagcag cagcgctgga tccaccgcag ctggggccag 241 tactttgcga ggatgcgcaa gaacagcttc gcgcacacgt atttcgacag gtgcatcggc 301 gaggagcacg agcacgaggt gctcgatcac aaggcgctgt atctgcgcag caagttccag 361 agatcggtgg ccctgccgct gggcgccttg gctgatagtt tgcgggctac ggaggcgagc 421 gaggtgtgga atgcgaatgt gtcgatggaa ctggccgatg cgctgtacga tctgaatcgg 481 ttcgaggaca acaagagctt gctgcacgag aatgtgcggc ggcatgcggg caccgctatg 541 aaggccttcg agaatcgcat cctgttggtc gatgagaatc tgaaggattg cacgggctac 601 agtctggcca acttcttcat ggagcactcg tcgcagctgc ccggcttcta tgagcaccag 661 caggaggagc taaggaaggc ggacaagcga ccgctgtgga aaatcctgaa ggagcgcaac 721 gagtgcgacg tccagagcag caggattcgc agggaggaga tgctctcgcc gctggagagc 781 gagcgcaggc gtcgcaaaac taagatctat tatcagaact atctcggtcg caactggacg 841 gattttatat tcctgaagac actacgtcgc aatcccaact gcctgctgaa caacaacttt 901 ggctcctcgc cgcaaataac cgagaatctg gagtactcct ttcggcggct gaagaccttc 961 acgcggatgc tacaggcacg cagccccatg tacaatgagt acttccagcg gaatccacga 1021 atggaggctc gcatgcggga ctcgaatctg tttaggattc agtaccagac caggaggaat 1081 atgcagagca tcctgcgaac catccaggtg ctgaggaaaa agaatgacat caagcgcctg 1141 cgcaaattcg tggaggacgt gatgggcaac tatgtggtca tcaagacgaa ccggctgatg 1201 ccctggaagg cggaattcat gaacgaggtg tacaaccacc tgggcctgag cctgtgccag 1261 ggctaccgcc tgccctccac gcgggtgacg ccctacgata agggcgccat gtgccatctg 1321 ctcaacatac ccagcgccaa gccgctggag cactcagagt tcatcttcgg cgaccggtcg 1381 acttactcct acgcgggtcc cgacaagcag agcaccgacc gattggccga tcaaaactac 1441 atcgaatacc tggagaagcg tctgctcttc gcccgcctgc cgatcgaaag gagctacttg 1501 ctccacgaac tggccgatcg gtacatgcag aagaaccact tcgtccagag cctgtcctac 1561 gcccagaagg ccatcgagga ggccaggatg tgcaatagtc ggatctggga gttcctcggc 1621 accatgctga tggccaaatc gcacgcagtg ctgcacaagt acgagcggca aacggaggtt 1681 ctcaatgccg cctaccaact ggccacgcag ctgaagtcgc cgcaactttg caccttcatc 1741 gaactgtgcc gcatgctgaa caaggactac ataacgctgc gcaagatgtc ccagctggtg 1801 accagcaagc gactacgcac caaaatctcc aataggtcca gcttcttcag ctcacccaac 1861 tactcgccca acttttcgga gattaagaag caggaggctg atcttctgac ggcctaattc 1921 ggcggattga ctgaggggca atgtttcaat acaatgccct tcatttgagc cgttggattt 1981 ggcccgccaa aataccagcc tctatggaat atagcaaagg aatcatataa aataatatta 2041 ttagatatta agaagtagca caaaatcgta aaaaaaaatt cagaattatc tgtattgtaa 2101 aatcgtaaaa atatatctaa agagaaatgt taagcctgtt cgctgtgtaa ttttaaaatt 2161 aatttactag ccc