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LOCUS XM_017148897 1317 bp mRNA linear INV 09-DEC-2024 (Ntf-2), mRNA. ACCESSION XM_017148897 VERSION XM_017148897.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017148897.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1317 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1317 /gene="Ntf-2" /note="nuclear transport factor-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108062296" CDS 179..571 /gene="Ntf-2" /codon_start=1 /product="probable nuclear transport factor 2" /protein_id="XP_017004386.1" /db_xref="GeneID:108062296" /translation="MSLNPQYEDIGKGFVQQYYAIFDDPANRANVVNFYSATDSFMTF EGHQIQGAPKILEKVQSLSFQKITRVITTVDSQPTFDGGVLINVLGRLQCDDDPPHAF SQVFVLKANAGTFFVAHDIFRLNIHNSA" misc_feature 194..553 /gene="Ntf-2" /note="Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many...; Region: NTF2; cd00780" /db_xref="CDD:238403" misc_feature order(284..286,305..307,326..328,401..403,407..412, 437..439,503..505,533..541,545..547,551..553) /gene="Ntf-2" /note="TAP/p15 interaction [active]" /db_xref="CDD:238403" misc_feature order(299..301,305..310,392..397,401..403,407..412, 431..433,443..451,461..463,467..478,485..487,503..505, 533..541,545..553) /gene="Ntf-2" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:238403" misc_feature order(308..313,362..364,377..379,446..448,452..454, 458..463,467..469,476..478,542..544,548..550) /gene="Ntf-2" /note="RanGDP-NTF2 interaction [active]" /db_xref="CDD:238403" polyA_site 1317 /gene="Ntf-2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgttgtttct atcgactccc gaccacctct agtgcgctgc gcctcgcaaa aaaaatttgg 61 ttggttttat tttaattttt cggaatacgt cgtgtgccgc tcgatcggat cggattgctc 121 accagcccgc ctttgcccgc ttacctttcg tcgcaccttc cgccttccca cgagtgaaat 181 gtcgctgaat ccgcagtacg aggacatcgg caagggcttt gtgcagcagt actatgcgat 241 attcgatgac ccggcgaacc gggcgaacgt ggtcaacttc tacagcgcta ccgactcctt 301 tatgaccttt gaaggtcacc aaatacaggg tgcgcccaag atcctcgaga aagtccagag 361 cctgagtttt cagaagatta cacgagtgat aaccacagtg gactcgcagc ccactttcga 421 tggcggagtg ctgatcaatg tcctcggaag gctacagtgc gacgacgatc ccccgcacgc 481 cttctcgcag gttttcgtcc tgaaggccaa tgccggcacc ttcttcgtcg cccacgacat 541 cttccgtctg aacatccaca actctgccta ggaacccggg agcctgggag cctccacacc 601 actcagcaac aacacactca acacgacatc caaagatgcc taacgacaac cacaacaaca 661 accagctggc agaggaacac tcaatgggaa gcacagcata acaaagcaga agcagcggtc 721 tcacgtttat caacaaatga aaaaaaccca cacaataaac aaaaaaaaaa gaagaaatta 781 atttgtaact actattacga tgtgtaaaca aaatgggcca ccagcagctc acctatacca 841 ttaccattgt gtccccaaac tgtactgctc tcggtactct cgatttacca ttgtatattc 901 cgcgaacaac acctggatct cgggatctaa tttagctagg gctatcaaat ttggtatgtg 961 gtctgcgacg agcttgcttt tgcgtttgcc ccggaaaaga atcaaaaaac acacatagtt 1021 ggcaactact taaattaaaa gtgacatttt ctattatata tatattttgt ttgagttgat 1081 tgaccttgaa tttcgattat gtactgtaat tattgaaata attttagata gccgtattgc 1141 aaatgttttc tatcgaattt tccccccact ttgtaaacca tgatcggagt accgggatat 1201 tattacttag tcgagagaat atcgacgcta gctttcttgt atgactaatt gagtgatggc 1261 gaattacttt ttattgagac aaaaaaaaga acacttaaat ataaagatta acgttaa