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LOCUS XM_017148892 7152 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017148892 VERSION XM_017148892.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017148892.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7152 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7152 /gene="ldd" /note="lipid droplet defective; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108062294" CDS 445..6441 /gene="ldd" /codon_start=1 /product="ATP-binding cassette sub-family A member 13 isoform X1" /protein_id="XP_017004381.2" /db_xref="GeneID:108062294" /translation="MRMHLSGREVRELLRKDLLVRWRQKGLSLILLAWPVAIFMLLYL IRLKYGSEEVDACQYPTRLLPTKNQVVPAAFSYICSIENRCQSAHPYEEYSHWKEAPL HSVIDVVNAFVTDERLHKAVVELAEKANFVSAITTLITSDRLDIIRSNISEIISLVPE IERRMNYSFDIKHLFSNRETFVKLGVLLCGHPFPNTDTIPLVNEILESEDFSQTNDAE LDAMPNRRRRRSEKLPTDWRPTKYCKRLYRDVTSTNQGKLTWNTIKPIIQGRILYTPA NVMTDSVVKFSNATFEELDRLKQLSRAAATILHKLHTNATFQEAFDNLLKLAKSPLVK SLVGDDFDIGEIERVFQYIRTNQLIYDILTTVADLMDCVSADRFEAVESVEELQKRAY ELNQNKLFLAALNLEDVGLRQSSYRLHMDTDNTQPTFENRNRFWFPGPAGSMVIDLKY HRGFVQLKQMVDLGIIKSKRNETGFPATEDPLEAGRSLSGLFSIKHTDDDVSDEDDDD DLDLSLEGSGAEGATEKVSNQESSTKQEPVEVTTEEEVGVTTEQPAVSGEPDLLLLNN EDVLKRSKRQGLFDLLGGLGGSGDKKKNKFEVDDMQFYTKQFPYPAFLNDVFKRGLYL AQGVQVAYLLGLVVFVALCVRERIWMRESRNSMLMRSMGLKAHSELVAWALMSFLELC AIFVLISGVLYSGGILGYTNWFFMMFYCLSFGICLISFCYMCSNFFNSANIGAVASAL LFFISLCPFIIVLMFDAKLSVFESFLVDLSFTTAFAKGWGELMRMELQQEGLTLGHLV QVGPARSECAMALLMFLLDFLLYAVIGLAYQRFKRNNYSFVKVSRSQLDDKLGASLAN VTKLYGSKCAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQTSGKVLLAGEH QVGVCWQDNILIPTLTAREHLHLYARIKMQPGESSGGEEEIQSEVERTLQSLNFGQHE SYPSWQLSGGYRRRLCVAIAFIASPSVVILDEPCNGVDAKARKDIWQLIERLRQGRAV IFATHFLDEAKYLSDSLVIMRNGRIIAQHSRDSLQRLCTSNYSIRMRCADATEVTYIV QKAQQLLPRSQVIHSGASDHPHNLTISASYSEHLTPGAVEFLELLQSQESTSGISDVE LTSSSSLEQEFEQLNRNPEETATAPRRANGGGGVVAGPAMISEDPPTPCQQFGLLMGK RLRHLSRNYRLLLYVLLLPALFELCAMWFVSYRLEDDFDTVLPLSRELYPKSAQFLSQ QQATSFSEKLYPGLRTSCDQLGGECREFTNSEEAYEWVLSSWDEYRERRYGGYGLNAS GATVWYNNKGYHSMLAWLNDLNSELLRTTLNDSESSILTLNEPWKLGYAELSTSSILR QAGDGSMVFILLIAFGLVVAAGSVYLVNERVNGEKLQQRLCGVSAVTYWLVAFVWDYL VMVLGLIVCLAVILMFGMPVFVDRQQLVGIIGLSLAFSFACVPAVHVAEKIFSDSSIA IVTIFCANLIIPLVTMGIVLILGVVGDGPAWDSWRHALNQAFLVFPIHALGDGFLELC KNYMVALVFRRYDIDSYKHPLASDLLGRHFTALLLVGVAGLILNVLIEWHLLRKVWQR VERMLDCTYRRELDKMGQLKLVNIQSIFKSCVAAGEAVRAENLWLAYRRGRYAVRQVH FGVQRGECFGLLGKNGAGKSTIFKLLTGQLQPNVGHIYFEQPGVSYCPQSNPLDPLLT ASECIRFYGRLRGIRDLEQFLDRVLDTYELRPYKDIQVRNLSGGNRRKLTVAVTCCGC APTVLMDEPTSDMDPVTRDLVYATIEQLLLARRAVVLTSHSVSEIEHLCQRVAVLRAG QVIASDTPERLKAEHGGYYAVTCFCGPAQQAVLSRSLSSRLPGARDLQHYAHSLRFLV RIRSPGSPNSDAPLLSELFAILRDICVDVARFSLSRCRFETVFERILDNCESANGTNG IHKDHQPQQDARKDLPSKSAAVGGSLETGYIHCGYEETRT" misc_feature 979..6393 /gene="ldd" /note="retinal-specific rim ABC transporter; Region: rim_protein; TIGR01257" /db_xref="CDD:130324" polyA_site 7152 /gene="ldd" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttagtcaagc tcagttcaat tgcggccagc tttgttggcg gacgtctcag gcggcacttt 61 tataccaaaa aattaaagaa aacaaaacta aaaactaaaa ctaagccgaa atcttcttgc 121 atttttttta actgtgctaa ctgtgcgaac gagaggaaaa ccccgagaaa agcgacacga 181 aaagagtaaa aactcttaat aaaacggtgt gtgaagtaaa caattgcagt gaccgaaaaa 241 cctttagcag aaaaaaataa gagataaaag aaataccagc gaagaagaag aaccagaagc 301 agcaacaaca acacgtttag cgggacaaag acaaagatgc ccgagtgatc gagttggaac 361 agcgatcggg aaaagtggga aaagtgaaag gaagcggaag cggagcagga gcaggaggag 421 aggtcagagg tcggagaagc gaggatgagg atgcacctga gtggtcgcga ggtgcgggag 481 ctgttgcgca aggacctcct agtgcgatgg cgccagaagg gcctcagcct aatcctgctg 541 gcctggccgg tggccatatt catgctgctc tacctgatcc gcctgaagta cggatccgag 601 gaggtcgacg cctgccagta tcccacccgc ttgctgccca ccaaaaacca ggtggtgccc 661 gccgccttct cctacatttg cagcattgag aaccgctgcc agtcggcgca tccctacgag 721 gagtactccc attggaagga ggcgcccctg cactccgtga tcgatgtggt gaatgccttc 781 gtgaccgacg aacgactcca taaggccgtc gtggagctgg ccgagaaggc caattttgtg 841 tcggccatca ccacgctgat caccagcgat cgtctcgata tcatacgaag caacataagt 901 gaaataatct ctctggtgcc cgaaatcgaa cgacggatga actatagctt cgacatcaag 961 catttatttt cgaatcgcga gaccttcgtg aagctgggcg tcctgctgtg cggccatcct 1021 ttccccaaca ccgataccat accgctggtc aacgagatcc tggagtcgga ggactttagc 1081 cagacgaatg acgccgagct cgatgccatg ccgaaccgtc gtcgtcgtcg atccgaaaaa 1141 ctccccacgg actggaggcc aaccaaatac tgcaagcgcc tctatcgtga cgtgacctcc 1201 acgaaccagg gcaaactcac ctggaacacc atcaagccga tcatccaggg tcggattttg 1261 tatacccccg ccaatgtgat gaccgacagc gtggtgaagt ttagtaatgc cacctttgag 1321 gagctggaca gactgaagca actttcccga gcggcggcca ccatactcca caaattgcac 1381 acgaatgcca ccttccagga ggccttcgac aatctgctca agctggccaa atcgccgctg 1441 gtcaagagtc tggtcggcga tgacttcgat attggggaaa tcgagcgggt attccagtat 1501 attcgcacca atcagctgat atacgacatc ctaaccacgg tggccgatct gatggactgc 1561 gtgtcggcgg atcgtttcga ggcggtggaa agtgtggagg agctgcagaa gagggcctac 1621 gaactgaatc agaacaaact ttttctggcc gccctcaatc tggaggacgt gggtctgcgg 1681 cagtcctcct atcgcctgca catggacacg gataatacgc agcccacttt cgagaaccgc 1741 aatcgattct ggttccccgg acccgccggc agcatggtca tcgatctcaa gtaccatcgt 1801 ggcttcgttc agctcaagca gatggtggat ctgggaataa tcaagagcaa acgaaatgag 1861 acgggtttcc ccgccaccga ggatcccctg gaagctggcc gctccctgag tggtctattt 1921 agtatcaagc atacggatga cgacgtctcc gatgaggacg acgatgatga tttagatctt 1981 agtctagagg gaagcggtgc agaaggggcc accgaaaagg tgtcgaatca agaatcttca 2041 accaaacagg agcctgttga ggtcaccacc gaagaagagg ttggggtcac caccgaacag 2101 ccggcggtaa gtggtgaacc cgatcttctg ctgctcaaca atgaggatgt tctgaagcga 2161 tccaagcgtc agggactctt cgatttactc ggaggattgg gaggatctgg agataagaaa 2221 aaaaataaat tcgaggtgga cgatatgcag ttctacacca aacagtttcc ctatcccgcc 2281 tttctaaacg atgtttttaa acgtggcttg tacttggccc aaggtgtcca ggtggcctat 2341 ctactaggtc tggtggtctt cgtagctctt tgtgtgaggg aacggatttg gatgcgggag 2401 agccgaaata gcatgctgat gcgatcgatg ggcctgaagg cacattccga actggtggcc 2461 tgggctctga tgagtttcct ggagctctgt gccatcttcg tgctaatcag tggagtcctc 2521 tacagtggcg gcattttggg ctacaccaac tggttcttca tgatgttcta ctgcctgagc 2581 tttggcattt gtctgatttc gttctgttac atgtgctcga acttcttcaa ttcggcgaat 2641 atcggagccg tggcctcggc ccttttgttt ttcatcagcc tgtgtccctt cattattgtc 2701 ctgatgtttg acgccaagtt gagtgtcttc gagagcttcc tggtggacct ctcgttcacc 2761 acggccttcg ccaagggctg gggtgagctg atgcggatgg agctgcagca ggagggcctg 2821 accctgggcc acctcgtcca ggtgggtccg gcgaggagcg agtgcgccat ggcgcttctc 2881 atgttcctgc tcgactttct cctatatgcg gtaatcggcc tggcctatca gcgtttcaag 2941 aggaacaact atagctttgt caaggtcagc cggtcgcagt tggacgacaa actgggtgcc 3001 tcgctggcga atgtgaccaa attgtacggc agcaagtgcg ccgtttccaa cctgagcctg 3061 gactttgccc gcaaccaggt gagctgtctg ctgggccgga atggagccgg gaagagcacg 3121 ctgatcaagc tgctgaccgg ccaaatccgc cagaccagcg gcaaagtgct cctggccggg 3181 gagcaccagg tgggcgtctg ttggcaggat aacatactca tacccacgct gacggcccgc 3241 gagcacctgc atctgtatgc caggatcaag atgcagccgg gtgagagcag cggcggtgag 3301 gaggagatcc aatcggaggt ggaacgcacc ctgcagagcc tgaactttgg ccagcacgag 3361 tcgtatccct cgtggcagct ctcggggggc tacagacgac gcctctgcgt ggccatcgcc 3421 ttcatcgcct cgcccagcgt cgtcatcctg gatgagccct gcaacggggt ggatgccaag 3481 gccaggaagg acatctggca gctgatcgag cgactgcgtc agggaagggc cgtcatcttt 3541 gccacccact tcctggacga ggccaagtac ctcagcgatt cgctggtgat aatgaggaat 3601 ggtcgcatta ttgcccagca cagccgggat tccctgcagc gtctgtgcac ctcgaactat 3661 agcattcgaa tgcgatgtgc cgacgcgacg gaagtgacct acattgtcca gaaggcccag 3721 cagctgctgc cccggagtca ggtgatccac tcgggagcct cggatcatcc gcataatttg 3781 accatcagtg ccagttattc ggagcacttg acgccgggag ccgtggagtt tttggaactc 3841 ctgcagtcgc aggagtctac ttccggcatc agcgacgtgg agctgacgag tagctccagt 3901 ttggagcagg agttcgagca gttgaacagg aatcccgagg agactgcaac tgctccgcga 3961 cgagctaacg gcggtggtgg agtggtggcc ggaccagcga tgatctcgga ggatccaccg 4021 acgccctgcc agcaatttgg actcctgatg ggcaagcgat tgaggcatct gtccaggaat 4081 taccgactcc tgctctatgt cctcctgctg cccgctttgt tcgagctgtg cgccatgtgg 4141 ttcgttagct atcgactgga ggacgacttc gacacggtgc tgcccctgag tcgtgagctg 4201 taccccaagt cagctcagtt cttgtcgcag cagcaggcca ccagtttctc ggagaagctg 4261 tatcctgggc taaggacctc ctgtgatcaa ctgggcgggg aatgcaggga gtttaccaac 4321 tccgaagagg cctacgaatg ggtgctcagt tcctgggatg agtatcgcga gcggcgctat 4381 ggaggctatg gattaaacgc ctcgggtgcc accgtttggt ataataacaa gggctaccac 4441 tcgatgttgg cctggctgaa cgatctcaac tcggagctac tgcgaacgac cctcaacgac 4501 tcggagtcga gcatcctgac cttgaacgaa ccctggaaac tcggctatgc cgaactgagc 4561 accagctcga tcctccgcca ggctggcgat ggatccatgg tcttcatcct gctgatagcc 4621 ttcggtttgg tggtggccgc cggttcggtt tacctggtca acgagcgggt caacggggag 4681 aagctgcagc agcggctgtg cggcgtgagt gccgtcacct actggctggt ggccttcgtc 4741 tgggactatc tggtcatggt cctgggactg atcgtctgcc tggccgtcat cctcatgttc 4801 ggaatgcccg tcttcgtgga ccgccagcag ttggtgggca tcattggact gtcgctggcc 4861 tttagcttcg cctgtgttcc cgctgtccat gtggccgaga agatcttcag cgactctagc 4921 attgccattg taacgatctt ctgcgccaac ctcatcatcc cactggtcac catgggcata 4981 gtgctcatcc tgggcgtggt gggcgatggt ccggcgtggg atagttggcg ccacgccctc 5041 aaccaggcct tcctcgtatt cccgattcac gctctgggcg atggcttcct ggagctgtgc 5101 aagaactata tggtggccct ggtattccgg cgctacgaca tcgattcgta caagcatcca 5161 ctggccagtg acctgctcgg gcgccacttc accgcccttc tgctggtggg cgtggccggg 5221 ctcatactca acgtcctcat cgaatggcat ctgctgcgga aggtgtggca gcgcgtggag 5281 cgaatgctgg actgcaccta tcgccgcgag ctggacaaga tgggccagct gaagctggtg 5341 aatatccaga gcatcttcaa gagctgcgtt gctgctgggg aggcggtgcg ggcggagaac 5401 ctctggctgg cctaccgccg cggtcgctat gcggtgcgcc aggtgcactt cggtgtccag 5461 cggggcgagt gcttcgggct gctgggcaag aacggggccg gcaagtccac catcttcaag 5521 ctgctcaccg ggcaactgca gcccaacgtg ggacacatct acttcgagca gcccggtgtg 5581 tcgtactgcc cgcagagcaa tcctctggac ccgctgctca ccgcgagcga gtgcatccgg 5641 ttctacggcc gcctgcgcgg cattcgcgac ctggagcagt tcctcgatcg cgtgctggac 5701 acctacgagc tgcgtcccta caaggacatc caggtgcgga atctgagtgg cggcaacagg 5761 cgcaagctaa cggtggccgt cacctgttgc ggctgcgcgc ccaccgttct catggacgag 5821 ccgaccagcg acatggatcc ggtgacccgg gatctggtct acgcgaccat tgagcagctg 5881 ctcctagccc gtcgggctgt ggtgctcacc tcgcactcgg tgtcggagat cgagcacctg 5941 tgccaacggg tggcggtgct gagggcgggc caggtgatcg ccagtgacac cccagagcga 6001 ctgaaggcgg agcacggtgg ctactatgcc gtcacctgct tctgtggccc cgcccaacag 6061 gccgtcctct cgagaagtct gagctcccgc ctgccaggtg cgcgggatct gcagcattat 6121 gcgcacagtt tgaggttcct cgtgaggatc cgatcgccgg gaagcccaaa ctccgatgcc 6181 ccactcctct ccgagctctt tgccatcctg cgagatattt gcgtggacgt ggctcgcttt 6241 tcgctgagtc gctgtcgttt cgagacggtt ttcgagcgaa tcctcgacaa ctgcgagtcg 6301 gcgaatggca ccaatggcat ccacaaggat caccagccgc agcaggatgc tagaaaggat 6361 ctgcccagca agtcggctgc tgtgggtgga tccctggaaa ccggctatat tcactgtggc 6421 tacgaggaga cgagaaccta aaggccgcac tctcatttta agaccaaaaa gaaccaaatt 6481 caaatcccca atagtttttt tttgttaagt aataatggct tttatgtgtg acttttcaaa 6541 agtttaaatt acgtcaatta taaaataaat ttgtgtataa aaatgatagc agaatttgcg 6601 ctttaaaaat atttgaaaaa tctgctttat taatattatt ttgaattata attatttttt 6661 acaataatat tgacaattat tatcacttaa aatattcaca tacttaaatt tgacaaaatg 6721 acaaaaaaaa aattttatag ggcttcactt tatggttttt gaaaaataat taaataacag 6781 tgaatttctt ataaaagctt ggaaaaaata tccaacaaaa atctgtaaat ttgtatcttt 6841 ttttctaatt tttttgtata ataatgtaat aggtagacca gttttttgtg ataagatgtg 6901 ataagtttct gcccacgtgg caataatatt cacttaattc cgggtgttct gtttagccat 6961 taagatcctt ttcccttgcc ccaaaaatat tataccccta gagctttaat attaataaat 7021 atgtactgta catttagatt taaataggta cgtgtatctg atgtatatta agcggaatcc 7081 ttataggatc tgtctgaagt tttgtattgc aatttgataa ctaataaagt gaacgatgta 7141 tatacattta aa