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LOCUS XM_017148879 2669 bp mRNA linear INV 09-DEC-2024 oligosaccharyltransferase complex (Stt3A), mRNA. ACCESSION XM_017148879 VERSION XM_017148879.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017148879.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2669 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2669 /gene="Stt3A" /note="catalytic subunit 3A of the oligosaccharyltransferase complex; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108062284" CDS 225..2366 /gene="Stt3A" /codon_start=1 /product="dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A" /protein_id="XP_017004368.1" /db_xref="GeneID:108062284" /translation="MTLDVGGVARGLLTWDKQEHLVKLAILILAAVLSFATRLFSVLR FESVIHEFDPYFNYRTTRFLAEQGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMLTSAA LYRLMWLLNVTIDIRNVCVFLAPFFSSLTTLVTYALTKEIHSTGAGLVAAALISIVPG YISRSVAGSYDNEGIAIFCMLFTYYLWIKAVKTGTIFWSAMSALAYFYMVSSWGGYVF LINLIPLHVLALMITGRFSHRIYIAYSTLYCVGTILSMQISFVGFQPIQSSEHMLALG TFGLCQIHAFVDYLRSRIPKDHFDLLFKTLVSSVLTVVFVVGTLLTLTGKVSPWTGRF YSLLDPSYAKNHIPIIASVSEHQPTSWSSFYFDLQILVFLFPAGLYFCFSKLTDSNIF IILYGVTSIYFAGVMVRLMLVLAPVMCVLSGIAISHLLAKYIKSVDAGGSGKAGGESK RQHKKLEQQTGGVKSEVAIGFVGVITLMLIVYTLHCTWVTSEAYSSPSIVLSARSHDG GRIIFDDFREAYYWLQMNTPEDARIMSWWDYGYQITAMANRTILVDNNTWNNTHISRV GQAMASSEEKAYEIMRELDVDYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDRGAHIR EKDYYAANGEFRVDKEGSPTLLNCLMYKMCYYRFGQMYTEGGKAQGYDRVRAAEIGNK DFELDVLEEAYTTEHWLVRIYKVKDLPNRGV" misc_feature 285..1709 /gene="Stt3A" /note="Oligosaccharyl transferase STT3 subunit; Region: STT3; pfam02516" /db_xref="CDD:396873" polyA_site 2669 /gene="Stt3A" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 taaccgatag gcactcgccg ttctttgcca cgaattgcaa gtttgcgaat tccgtcgtct 61 tcgacttgca gccgttgttt tccgcgaaaa aggtcaataa tcctgggctc cctggtgcgg 121 cacgcgtagt cctggacatc cggagtgcag tggacaaggc gcagcggcga tagaacagct 181 cctgagccga aataaacggc gccgaaaaac gccggcaggc gaaaatgacg ctggacgtgg 241 gcggcgtcgc ccgcggtctg ctcacctggg acaagcagga gcacctggtc aagctggcca 301 ttctcatcct ggcagcggtc ttgtcattcg ccacgcgcct cttctccgtc ctccggttcg 361 agagcgtcat ccatgagttc gacccgtact tcaactaccg caccacgcgg ttcctcgccg 421 agcagggctt ctacaagttc cacaactggt tcgatgaccg cgcctggtac cccctgggcc 481 gcatcatcgg cggcaccatt tacccgggcc tgatgctcac ctcggcggct ttgtaccgcc 541 tgatgtggct cctgaacgtg accatcgaca ttaggaacgt gtgcgtcttc ctggcgccct 601 tcttctcctc gctgaccacc ctggtgacct atgccctcac gaaggagatc cacagcaccg 661 gagctggtct ggtggccgcc gccttgatct ccatcgtgcc gggctatatc tcccgatctg 721 tggcgggatc gtacgacaac gagggcatcg ccatcttctg catgctcttc acctactatc 781 tgtggatcaa ggccgtgaag acgggcacga tcttctggtc ggccatgtcg gcactggcct 841 acttctatat ggtctcctcg tggggcggct atgtcttcct gatcaacctc attccgctgc 901 acgtgctggc gctgatgatc accgggcgat tctcgcacag gatctacata gcgtacagca 961 cgctctactg cgtgggcacc attctgtcca tgcagatctc gttcgtgggc ttccaaccca 1021 tccagagctc ggagcacatg ctggctttgg gaacctttgg cctgtgccag attcacgcct 1081 ttgtggatta tctgcgctct cgcattccca aggatcactt cgatctgttg ttcaagacct 1141 tggtttccag tgttctcact gtggtgttcg ttgtgggcac tctgctcacg ctgactggaa 1201 aagtatcgcc ctggactggc agattttact cgctactcga tccgtcctat gccaagaatc 1261 acattccaat cattgcctcg gtttcagagc accagccgac atcctggtcg tccttctatt 1321 ttgatctgca gatcctcgtg tttctctttc ccgctggcct gtacttctgc ttctccaagc 1381 tgaccgactc gaatatcttc atcattttgt acggcgtgac cagtatttac ttcgccggtg 1441 tgatggtgcg tctaatgctg gtcctggcgc ccgttatgtg cgtcctctcc ggcatagcca 1501 tttcgcatct gctggccaag tacatcaaga gcgtggatgc gggcggctcg gggaaggcgg 1561 gcggggagag caagcggcag cacaagaagc tggaacagca gacgggcggc gtgaagagcg 1621 aggtggccat cggatttgtg ggagtcatca cactgatgct gatcgtctac acgctgcact 1681 gcacctgggt cacctcggag gcgtactcct cgcccagcat tgtgctgagt gcccgttcgc 1741 acgacggcgg ccgcattatc ttcgatgact tccgcgaggc ctactactgg ctgcagatga 1801 acacgccgga ggatgctcgc attatgtcct ggtgggatta tggctaccag ataacggcca 1861 tggccaatcg cacgatattg gtggacaaca acacctggaa caacacgcac atatcgcgcg 1921 ttggccaggc gatggcttcg tcggaggaga aggcctacga gataatgcgc gaactggatg 1981 tggattatgt tctggtgatc ttcggcggac tcaccggcta ctcctcggac gatatcaaca 2041 agttcctgtg gatggtgcgc attggcggca gcacggatcg cggggcgcac atccgcgaaa 2101 aggactacta tgcggccaat ggggaattcc gggtggacaa ggagggctcg cccactctgc 2161 tcaactgtct gatgtacaag atgtgctact atcgcttcgg gcagatgtac accgagggcg 2221 gcaaggccca gggctacgat cgcgttcggg cggccgagat tggcaacaag gacttcgagc 2281 tggacgttct ggaggaggcc tacaccacgg agcactggct ggtgcgcatc tacaaggtca 2341 aggacctgcc gaatcgcggc gtctaagccg tcgcaacatc attccgctct attctgtgtt 2401 ctgtacatta gctctctctg tctctatcta tctcgaacat ttggaatctc cctctcagtc 2461 tcgctcaacg agtattaatc gctgctttct cctgctttct ccgtcgtgca tttagtttta 2521 cacttgcatt aagccacaaa aaccatgtat tttttttata cttttacaaa tgtctcaagt 2581 gtaccagatg cgtgtagctc ccctaaacaa gaaaacagca tgtaagcgaa tcgaacgaaa 2641 tatatatata tgtgaaaata ataactaaa