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LOCUS XM_017146977 3983 bp mRNA linear INV 09-DEC-2024 (LOC108061007), mRNA. ACCESSION XM_017146977 VERSION XM_017146977.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146977.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3983 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3983 /gene="LOC108061007" /note="uncharacterized LOC108061007; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108061007" CDS 1..2991 /gene="LOC108061007" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_017002466.2" /db_xref="GeneID:108061007" /translation="MSPAEELRLVGGSDAYQLAASTGGGGGVGGGVGIGSRGGATGGD SVGDEKMNDVHDKYATALSHFLDLHSNGTVDMERLSGPILKSSIKSVYWLFLMQYAAL ALLGVVLNVIIVVYIMYHRLYKDVTHAFIINLALCHFVQCALVLPVSLMVMLIENWIF GQFLCFFLPMLQDIPLHVAMISHILIAWDRMRWLNDPLKARLPGFVCCCATWLTGMVI ALPYPIYTNYVELGNLIPELSGIGLCVVNLMDDMQEYTRGLFLLMYCGPAILLSYLYI RTSQELRPPDGPFAVMMYEHRADVRIRQRNSSTSSVEPRQLSGGGVAGLSNGGGSSAR SYDLYSAELDVHREKRKQRNFGSMAATQVVCMCPLMILRFARLSLEETYENAKHFDFT YLMFVWVAFLPTVIFPVIYASQILPRDEQERLRGYFRLSSKRKQKTQRRSDAGGAGSS REDSIEKDEASNTTSVHHAAAGSSEQQPPSHKHASKLRGHEREVRLPGSHGSSSSGDR YTGAPYRQGKERDRERERLRAGGRGAGDAGVVNNLGKDVRGKKHDVKINIISDGGVAS HSGHRNKQPGSNSSSNNNNNHRSRPNPGRHGQSKLTAECLSNVTASTFCNSGTGNGNG NANGNGLSGVLIPDDSSTSNYGDGEESSVVSSMMVGPASQHRWPGSGAQRHSKDVTFS ECGGSSSRSSTFSSSTLERDLEIMDQLERERSMDIQEMLLRERERDKVRRQLPDIEKL YAQRSPKGKRGEAAGGLALVMPGSDPLTSSLSVSTEYSLCSTLETSGGVGHEEQQQQR HLEEVDEEEEVVPPDFYDSYTPGGSQNLPPNSGGAPPPSLAATGSSSSVIVPAYQYQY SRNRLSRKSSGSGSSHHHHGGGGGGHHGHHHGQHGSGGIGGVASGRGSKRDSFNSLNG TDLMAGAFCELDPTQPLNKMAVIEGRMRRSSPRNASFSSGSGVSGGRSSMKSSSRDYD YGHGSSSHSAHPELDFRENIFAEL" misc_feature 295..1236 /gene="LOC108061007" /note="rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Region: 7tm_classA_rhodopsin-like; cd00637" /db_xref="CDD:410626" misc_feature 295..360 /gene="LOC108061007" /note="TM helix 1 [structural motif]; Region: TM helix 1" /db_xref="CDD:410626" misc_feature 379..459 /gene="LOC108061007" /note="TM helix 2 [structural motif]; Region: TM helix 2" /db_xref="CDD:410626" misc_feature order(445..447,454..459,493..510,514..519,526..528, 646..648,652..666,754..756,763..771,775..783,787..792, 1096..1098,1105..1110,1114..1119,1126..1128,1165..1170, 1174..1182,1189..1191,1198..1203) /gene="LOC108061007" /note="putative ligand binding pocket [chemical binding]; other site" /db_xref="CDD:410626" misc_feature 493..585 /gene="LOC108061007" /note="TM helix 3 [structural motif]; Region: TM helix 3" /db_xref="CDD:410626" misc_feature 610..666 /gene="LOC108061007" /note="TM helix 4 [structural motif]; Region: TM helix 4" /db_xref="CDD:410626" misc_feature 754..831 /gene="LOC108061007" /note="TM helix 5 [structural motif]; Region: TM helix 5" /db_xref="CDD:410626" misc_feature 1036..1128 /gene="LOC108061007" /note="TM helix 6 [structural motif]; Region: TM helix 6" /db_xref="CDD:410626" misc_feature 1168..1236 /gene="LOC108061007" /note="TM helix 7 [structural motif]; Region: TM helix 7" /db_xref="CDD:410626" ORIGIN 1 atgtcgcctg ctgaggagct tcgcttggtc ggaggatcgg atgcctacca gttggcggcg 61 agcactggag gcggcggcgg cgttggagga ggagtcggaa ttggatccag aggcggcgca 121 accggaggag actctgtagg cgatgagaaa atgaacgatg tgcacgacaa gtatgcgacg 181 gcgttgtccc acttcctgga cctgcactcc aacggcacgg tggacatgga gcggctgagc 241 ggtccgatcc taaagtcgag catcaaatct gtctactggc tgttcctcat gcagtacgct 301 gccctcgccc tgctgggcgt cgtcctgaac gtgatcattg tggtgtacat catgtaccac 361 cgactgtaca aggatgtgac ccatgcgttc atcatcaacc tggcgctctg ccacttcgtc 421 cagtgcgccc tcgttctgcc cgtctccctg atggtcatgc tcatcgagaa ctggatcttt 481 ggccagttcc tgtgcttctt tctgcccatg ctgcaggaca taccgctgca cgtggccatg 541 atctcgcaca tcctgatcgc ctgggaccgg atgcgttggc taaacgatcc gctgaaggcc 601 cgcctgccgg gattcgtctg ctgctgcgcc acctggctga ccggaatggt gattgccctg 661 ccctacccca tctacaccaa ctacgtggag ctggggaact taataccaga gctttcgggg 721 atcggattgt gtgtggtcaa cctgatggac gacatgcagg aatatacccg tgggctcttc 781 ctgcttatgt actgcggtcc ggccatcctg ctgtcctacc tgtacatccg cacctcgcag 841 gagctgcgtc cgcccgacgg acccttcgcc gtgatgatgt acgagcaccg cgcggatgtg 901 cggatccgcc agaggaactc ctcgacctca tcggtggagc cccgccagtt gagcggtggg 961 ggcgtggctg ggctgagcaa tgggggcggc agctccgccc gctcctacga cttgtacagt 1021 gccgaactgg atgtgcatcg cgagaagcgg aagcagcgca actttggcag catggccgcc 1081 acccaggtgg tgtgcatgtg cccgctgatg atcctgcgct tcgccagact ctcgctggag 1141 gagacgtacg agaatgcgaa gcacttcgac ttcacctacc tgatgttcgt gtgggtggcc 1201 tttctgccca cggtcatctt cccggtcatc tatgcctcgc agattttgcc cagagatgaa 1261 caggagcgtc tgaggggcta cttccggctc tcctcgaagc gcaagcagaa gacccagcgg 1321 cgcagcgatg ctggcggagc cggcagctcc cgcgaggatt ccatcgagaa ggacgaggcc 1381 tcaaacacga cgagtgtcca ccatgccgcc gccggctcgt ccgagcagca gccgccgtcc 1441 cacaagcatg cgtccaagtt gcgcggtcac gagagggagg tgcgtctgcc aggatcacac 1501 ggatcctcgt catcgggtga tcgctacaca ggagcaccct atcgccaggg caaggagagg 1561 gacagggaga gggaaaggct aagggcgggc ggtcgagggg cgggcgatgc gggggtggtc 1621 aacaatctgg gcaaggatgt gcgcggcaag aagcacgacg tcaagatcaa cataatttcg 1681 gatggaggcg tggctagcca ctcggggcac cggaacaaac agccgggcag caacagcagt 1741 agcaacaaca acaataacca tcggagtcgc cccaatcccg gtcgccatgg ccagagcaaa 1801 ctgaccgccg agtgtctgtc caatgtgacc gcctccactt tttgcaacag cggcaccgga 1861 aacggaaatg ggaatgccaa tggaaatggt ctgagtggcg tcctaatccc cgacgacagc 1921 agcaccagca attatggcga cggcgaggag agctcggtgg tcagcagcat gatggtgggt 1981 ccggcatcgc agcatcgctg gccgggatcg ggggcacagc ggcacagcaa ggacgtgacg 2041 ttcagcgagt gcggcggcag cagcagcagg agcagcacct tctcgtcgag caccctggag 2101 cgggacctgg agatcatgga ccagctggag cgggagcgca gcatggacat ccaggagatg 2161 ctgctgaggg agcgggagcg ggacaaggtg cgtcgccagt tgccggacat cgagaagctc 2221 tacgcccagc gctcgccgaa gggcaaaagg ggcgaggcgg ctggaggatt ggctttggtc 2281 atgcccggca gtgatccact gacctccagc ctctcggtgt ccacggaata cagcctgtgc 2341 tccacattgg aaaccagcgg tggcgttggc cacgaggagc agcagcagca gcgacatctg 2401 gaggaggtgg acgaggagga ggaggtggtg ccgccggact tttatgacag ctatacgccc 2461 ggtggctccc agaacttgcc acccaattcg ggaggcgctc cacctccttc gctggccgcc 2521 accggctcct cctcctccgt catcgtgccc gcctatcagt accaatacag ccgcaatcgg 2581 ctgagccgga agagctccgg ctccgggtcg agccatcacc accatggcgg cggcggtggt 2641 ggtcatcatg gccatcatca tggccagcat ggcagcgggg gcattggagg cgtggccagt 2701 ggccggggct ccaagcggga cagcttcaat tcgctgaacg gcaccgatct gatggccggc 2761 gccttctgcg aactggatcc cacgcaaccg ctgaacaaga tggccgtgat cgagggccgg 2821 atgcgcagga gcagtccgcg gaatgccagc ttcagctccg gatcgggggt gtccgggggg 2881 cgcagttcga tgaagtcctc gtcgcgggac tatgactatg ggcacggctc ctcctcgcac 2941 tcggcgcatc cggagttgga tttcagggag aatatctttg cggagctgta agaatgtgga 3001 tagattgtag gagagaaata tcgaatattt cgatattttc gatattgctc ggggttagat 3061 tttcgatact atcgaacata tcgatatttt tcaagcccta gaaaacagat gctaaacgac 3121 gagagatggg aaacgaaaag ctttacggtt acggatttgc aggagtttaa gtaggacaat 3181 ttgcaggagc tgtacgcttt tttttacggg taggatacgg gtggggttgt ctcttttttt 3241 tttttagcaa aggcagttgc tcattcggag aggaaaacaa agtgagagga ctacgaaata 3301 cttgtaagga actccagtca aacggagaga tacagataca tttacaccta aatgcataag 3361 agatactaaa acaaaaaaaa acaaagatct atatagaccg agttattgga ttacttcgcc 3421 caactggttg ttgactaatg tttgttgatt attgcgatcg gtggcgagat cacagatcac 3481 acagatcgca gatcgcagtt tatagaacag atcagagttt agagagaagt gaaaactgtg 3541 ccaagaaagg gagtggaaag gaaatatata catgtctttt aaatgttgct aactttgtcg 3601 ggaggacggg agggcaaaag gatgtgccag tgtttttaaa ctttcccaag ctacatacat 3661 acatatatgg atatatacaa tacgatatat acattagaca tatgctaaga catattgaat 3721 attaccaaat caaatgcaaa gtttattgaa tgttaaatca aagtcaaaat acgaaaatac 3781 aaaaatacga aatacaaaat ccaaaatcgg aataaaccat taaagttata gctgtaagcc 3841 agggcaattc ttcagagccc caaagaattg cgcccacaca ctcacacata cactttttgc 3901 ggatccattt gggattcccc cctcagagac acagattcaa tttgttgggc cagatcctga 3961 tccagatcca gatgcggatc cta