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PREDICTED: Drosophila takahashii kairos (kairos), transcript


LOCUS       XM_017146976            2853 bp    mRNA    linear   INV 09-DEC-2024
            variant X1, mRNA.
ACCESSION   XM_017146976
VERSION     XM_017146976.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017146976.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2853
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2853
                     /gene="kairos"
                     /note="kairos; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:108061006"
     CDS             553..2442
                     /gene="kairos"
                     /codon_start=1
                     /product="damage suppressor protein isoform X1"
                     /protein_id="XP_017002465.2"
                     /db_xref="GeneID:108061006"
                     /translation="MDALRFRGSPFARFTGQSTGPGHPRPPPHPQHPQHPQRPQPMGS
                     HGIGAPEPLIVVEESNLPEEQEDSSEPTVSNRGSLDIDSPVNPYLLSPWRDPREARKH
                     SLPSQQVTDGITASQVRRLSERGGEGSGPTPKEAAFLATLSQAPAPTGRRHSVVTISK
                     VPTTIFGRSRRESVAAYPSNNGSSRVLNSRRESNTGPPSTDPIGSIHNLQLDIMDDIY
                     LQSRKARLKLWTSSNEKVCEVQTVDEAGTGQPGRRFTNRRYSECPQPGLASSFRRASE
                     LPPPQNQQQQQQSSNTRASTRRKKSGSGTGLLGSRSDIAGIFSSLTSSAMDMHRPEPE
                     GRDGSSSASSSATATASSPFLSQSFQAAARGRATSATPTPTAHSGLQSLGGAGGGLAV
                     GGSGSGSGSGSGSSAGLLDPNAGRSTRSNSFDVSLLNNAKQLVSDVQDNGSATLTGWF
                     AKRHTPLARKKSVRSKSSAVALSKDVLERLQKKDPLGGDSGKPKLKPRSKQKTWAEST
                     KATVDATILGTAIEGFLRKSSNASMAGGSGTGAGSSSGASTSAAARGATPKGGGGKES
                     GSASGSPAHGARRSRASAGSSAQSQAGRAVRSTLNWFGKADEDDSKDTCDASLCATLK
                     DLFVK"
     polyA_site      2853
                     /gene="kairos"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgctggccgc acacatcctc ggatcgagtc gagtcctcag cctctgcgag ccaggattca
       61 ctgctctttg ggcagcaacg cgacaacaag ttgaactcgg ctcgaccatc tcagccatca
      121 gccatcagcc atctagccaa aaaagcacct ggcgctaatc cgtcgctatt aacaccacac
      181 acaaataacc gattaaaatt tcgattctgt tttcgattgc gatttcgatt acgtttccga
      241 tcaattcgat ttgcgaatca agtgaatttc ctgcatcaat taatgcaaag caaagcgaaa
      301 agcggagcaa aaataaataa ataaaacgta aaactcagca gaaagtaata aaataagagc
      361 ggacacgtcg cacgaaaata aaaaaacgag ccggaggaga ggaagccaaa gtgtcaacaa
      421 ggacacttca aaggatagag gacagagaac agagaacaac ggagtggagg agtcgggagc
      481 cgattgtccg tagaccccga agacagtcag cagcgaattc cccgctggcg agcaattgag
      541 caattgtgca aaatggatgc gctacgcttc cgtggttcgc catttgcccg cttcacgggc
      601 cagtcaaccg gaccgggtca tccccgccca ccgccacacc cccagcatcc gcagcatccg
      661 cagcgcccac agccaatggg atcccatggc atcggcgctc cggagcccct gattgtggtg
      721 gaggagtcca acctgcccga ggagcaggag gacagctccg agccgacggt ctcgaatcgc
      781 ggcagcctgg acatcgattc gcccgtaaat ccgtatctgc tgtcgccgtg gcgcgatccc
      841 cgggaggccc gcaagcactc gctgccctcg cagcaggtga ccgacggcat cacggccagc
      901 caggtgcgac gactatcgga gcgcggcggc gagggctcgg ggccgacgcc caaggaggcc
      961 gccttcctgg ccaccctctc gcaggctccg gcgcccaccg gacgacgtca ctcggtggtg
     1021 accatctcca aggtgcccac caccatattc ggaagatcgc gtcgcgagtc cgtggccgca
     1081 tatcccagca acaatggaag cagtcgtgtt ttgaattcac gtcgcgagag caacacaggt
     1141 cccccgtcga cagaccccat cgggagcatc cacaatctgc agctggacat catggacgac
     1201 atctacttgc agtcgaggaa ggcgcgcttg aagctctgga cctcctccaa cgagaaggtg
     1261 tgcgaggtgc agacagtcga tgaggcgggc accggtcagc cgggcaggcg cttcaccaac
     1321 cgacgctact cggagtgtcc tcagccggga ttggccagct cctttcgtcg cgcctccgag
     1381 ctgccgcctc cgcaaaatca gcaacagcag cagcagagct ccaacactcg ggcctcgacg
     1441 cgtcgcaaga agtcgggcag tggaaccgga cttttgggca gtcgttcgga catcgccggc
     1501 atattcagct cgttgaccag ctcggccatg gacatgcacc ggccggaacc ggagggccgg
     1561 gacggcagct ccagtgccag ctcctcggcc acggccacgg ccagcagtcc gtttctcagc
     1621 caatcctttc aggcggccgc ccgcggacgg gccaccagtg caacgcccac accgacggca
     1681 cacagcggct tgcagtccct cggcggcgca gggggcggat tggcagtcgg cggcagcggc
     1741 agcggcagcg gcagcggcag cggcagctca gcgggcctgc tcgatcccaa tgccggtcgc
     1801 tcgacgcgct ccaacagctt cgatgtgtcc ctgctgaaca atgccaagca gctggtgagc
     1861 gatgtgcagg acaatggatc ggccaccttg acgggatggt ttgccaagcg gcacactccg
     1921 ttggcgcgaa agaagagtgt gcgcagcaag agttcggcgg tggcgctctc gaaggacgtg
     1981 ctggagcgtt tgcagaagaa ggatccgttg ggcggcgatt cgggtaagcc gaaactgaag
     2041 cccaggagca agcaaaagac ctgggcggaa tcgaccaagg cgacggtgga tgccaccatt
     2101 ttgggcacag ccatcgaggg atttcttcgc aagagctcca atgccagcat ggccggtgga
     2161 tctggaacgg gtgctggatc gtcgagcgga gcctccacat cggcggctgc ccgcggtgcc
     2221 acgcccaagg ggggcggcgg caaggagtcg ggcagcgcca gcggcagtcc cgcccacgga
     2281 gcccgtcgca gtcgagcctc cgccggcagt tccgctcagt cgcaggccgg ccgtgccgtt
     2341 cgctccacac ttaactggtt cggcaaggcc gacgaggacg actcgaagga cacgtgcgac
     2401 gcctcgcttt gcgcgacgct caaggacctg ttcgtcaaat aggtcggggg ccgcagaggc
     2461 aagtaaagca atgggtggag tcccggctag agcagcacaa cgccagctac ttgcacctct
     2521 gagatccaga aatccttatc gaaatccgaa aacaaaacga acgaagttgg aggcttacac
     2581 aacccagtga acaataagca cagcagcagt attcattatt taaaatcacc attaaatcac
     2641 ataacagaca ggcaagcaaa tgcttaatga cagattaaaa gcacagcaaa gtcgcccttg
     2701 cacacaaaag gagatgcaaa taatacatca acatcgaaat caaaatcaat aataataatc
     2761 gcagcacttg catacataac tcacaaacaa tataataatt gacagcaggc aaaggcttca
     2821 caaaacacgt ccattaaatt caaacactga gaa