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LOCUS XM_017146972 1210 bp mRNA linear INV 09-DEC-2024 (LOC108061003), transcript variant X1, mRNA. ACCESSION XM_017146972 VERSION XM_017146972.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146972.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1210 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1210 /gene="LOC108061003" /note="uncharacterized LOC108061003; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108061003" CDS 167..1057 /gene="LOC108061003" /codon_start=1 /product="transcription activator GAGA isoform X1" /protein_id="XP_017002461.1" /db_xref="GeneID:108061003" /translation="MRSTKARGGNGNRLVSSEGQWGKERHGAFLKDHGRGHSSQNPAQ FGGFSPSGQQYPAVYAQPGLRGGGKLKATPISLLQQQQQQLLAQQQQQLLAATAQQQQ QQQGSGLGSGSGAAGGGVVNMPSYADQMHAAFLDYQRQRAEFEQQQQQLLQKLYHYYP DVSGGLPSGAQAQSPPADGGAVGVAPPAANRFVYRRPQFAGGAPGSAAGPLRTNGAGD FYSTQQHMGFMQQQQQDVLRDQQQSVAQQFATSQLAPTTRQSYGMAVPMSSVLGSPSY QQSPDVSHVSFSSGNLNYSF" polyA_site 1210 /gene="LOC108061003" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcttagtcgg ttcagttcgg ttcgtttttt actatatttt cgctctagac tttcaacaac 61 caaaaattgt atcaaaatca aaacgaaaat tgaaattgaa attttcacat tttggcctag 121 agtttctcga acttctgtga tatatagcaa aatatagcaa gcgacaatga gaagcacgaa 181 agctcgcggt ggtaatggca atcggctggt tagttcggag ggacaatggg gcaaggagcg 241 ccatggggca ttcctgaagg atcacgggcg tggccattca tctcaaaatc ccgcccaatt 301 tggtggcttc tcgccatcgg gacaacagta tccggccgtc tacgcgcagc cgggactccg 361 gggcggtggc aagctcaagg ccacgcccat ctccctgctg cagcagcagc aacagcagtt 421 gttggctcag cagcagcagc agctgttggc cgccacagcg cagcagcagc agcagcagca 481 gggatctgga ttaggatcgg gttcaggggc ggcgggcggt ggcgtggtca atatgcccag 541 ctatgcggac caaatgcacg ccgccttcct cgactatcag cgccagcggg cggaattcga 601 gcagcaacag cagcagctgc tgcagaagct ctatcactac tatcccgatg tttccggcgg 661 cctcccctct ggcgcccaag ctcagtcgcc gcccgccgac ggaggagcag tgggcgtggc 721 accgccagca gccaaccgct tcgtctaccg tcgtccgcag ttcgccggcg gcgctccagg 781 atcagcagca ggacctctac gcaccaacgg agccggcgac ttctactcca cgcagcagca 841 catgggcttc atgcagcagc agcagcagga tgtgctacgc gaccagcagc agtcggtggc 901 ccagcagttc gccaccagcc agctggcgcc caccacccgc cagagctacg ggatggccgt 961 tcccatgtcc tcggtgctgg gctccccgtc ctaccaacag tcgccggacg tctcgcatgt 1021 cagcttctcg agcggcaacc tcaactacag cttctgagct tctgggaagc ggatttcgga 1081 ctaactgcta gtatttccca tatattattt tcgagaatct aagttttttt ttttgcgtaa 1141 attttcgtgg tatttgataa gaggaattgt gtagggcaag caagaataaa ttttgtgagt 1201 gatgataatg