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PREDICTED: Drosophila takahashii hayan (Hayan), transcript variant


LOCUS       XM_017146967            2234 bp    mRNA    linear   INV 09-DEC-2024
            X3, mRNA.
ACCESSION   XM_017146967
VERSION     XM_017146967.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017146967.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2234
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2234
                     /gene="Hayan"
                     /note="hayan; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins"
                     /db_xref="GeneID:108061002"
     CDS             358..2196
                     /gene="Hayan"
                     /codon_start=1
                     /product="serine protease Hayan isoform X2"
                     /protein_id="XP_017002456.3"
                     /db_xref="GeneID:108061002"
                     /translation="MISARSCLLLGLLALTNSGRLAVGDEGDPCQVKADIPGICRPSS
                     GCNNIEGYLKSGALSTNQVPSCGFGAREEIICCPTVACCPTDRAPEVVPVLATSSEPS
                     RLPAPVPVTNPQPKPEPEPLPPTTTERTRERERESRLDENENFFDFNKLLSTTVKPQK
                     THESLKMPTHQSMTMPTHQSMKMPIQQVGAWGIATTTQRPRMEPHWGWDSREPRIVNR
                     PLTTPRSRNPNPNPKPNNPNNPSNNNLIHLVNDRLRQQGMQIEPAREVPMEREPQKPT
                     PTPVMDPFEPYRFRGQDRDGDGDRDNQPEPWREPSNDLDELRTTTTTTTPSPSPSRVN
                     VPDQERPAAAACARIRSGDRPLTPHILGGIPVALGVYPHMAAIAYNTFDTVDFRCGGS
                     LIASRFVLTAAHCVNSDSTTPAFVRLGTVAIENPTAGFQDINVIDVQIHPNYTSSSKY
                     NDIAILELAEDAKESDTIRPACLYIDRAGPPIDSKVFVAGWGVMNVTNRARSKILLRA
                     GLDLVPVDECNASFAEQPSTIRALKQGVIDSLLCAADKKQVKDACQGDSGGPLILETD
                     EVDGLYSVLGVINSGFGCATKTPGLYTRVSSFLDYIEGIVWPANRV"
     misc_feature    445..591
                     /gene="Hayan"
                     /note="Clip or disulphide knot domain; Region: CLIP;
                     smart00680"
                     /db_xref="CDD:197829"
     misc_feature    1432..2163
                     /gene="Hayan"
                     /note="Trypsin-like serine protease; Region: Tryp_SPc;
                     smart00020"
                     /db_xref="CDD:214473"
     misc_feature    1435..1437
                     /gene="Hayan"
                     /note="cleavage site [active]"
                     /db_xref="CDD:238113"
     misc_feature    order(1567..1569,1711..1713,2026..2028)
                     /gene="Hayan"
                     /note="active site"
                     /db_xref="CDD:238113"
     misc_feature    order(2008..2010,2092..2094,2098..2100)
                     /gene="Hayan"
                     /note="substrate binding sites [chemical binding]; other
                     site"
                     /db_xref="CDD:238113"
     polyA_site      2234
                     /gene="Hayan"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agttgcttgg gcgatgcgtt gctgagcggt catagcccca ctatatacta tatagcctat
       61 tccgccgatt ccgaatccga atccgattcc gcgatagcca ccggttttca gctttattgg
      121 ctctgctggt gtgctttttt gctgtgtgtt tttttttgtt ttgtgatttt tatttacttt
      181 ttttttattt tgtgttgtct tatttttcga tgtagtgttg tgttgtattt tattgttcag
      241 tgccgcccga ttgccgtttt catagtgccc gacgcactca ataaacatca acgtatacgt
      301 atcatacgta ttcccttatc agagaccgaa aaaaggtcgt gtcaaagctg actgaagatg
      361 atctcggcga gaagctgcct ccttctgggc cttctggcac tgacaaactc cggccgacta
      421 gcagttgggg atgagggcga tccgtgccag gtgaaggcgg acattccggg catttgccgg
      481 ccatcctcgg gttgtaacaa tatcgaggga tacctcaagt cgggggccct gtccaccaat
      541 caagtgccga gctgcggctt tggggcgcgc gaggagatca tctgctgccc caccgtcgcc
      601 tgctgtccca ctgaccgagc tcccgaggtg gtcccagtgc tggccacgag ctctgagccc
      661 agcaggttac cagcaccagt tccagtaaca aatcctcaac ctaaaccaga acccgagcca
      721 ctgcctccca cgaccacgga aaggacaagg gaaagggaac gggagtcgcg actggacgag
      781 aacgagaact tcttcgactt taacaagctg ctcagcacca cagtcaagcc gcagaaaacg
      841 cacgagtctt tgaagatgcc cacccatcag tcgatgacca tgcccaccca tcagtccatg
      901 aagatgccca tccagcaggt gggtgcctgg ggcatagcta caaccacgca gagacctcgg
      961 atggagccgc attggggctg ggacagtcgc gagcccagga ttgtgaatcg ccccttgacc
     1021 acgccacgtt cgcggaatcc caatcccaat cccaaaccca ataatccaaa taacccgagt
     1081 aataacaatc tcatccacct ggtcaacgat cgactgcggc agcagggaat gcagatcgag
     1141 ccagccaggg aagtgccgat ggaacgagag ccccagaaac ccacgcccac tcccgtaatg
     1201 gatcccttcg aaccctatcg gtttcgggga caggacaggg acggggacgg ggacagggac
     1261 aaccaacccg aaccttggag ggagcccagc aatgacctgg acgagttgcg tacgacgacg
     1321 acgacgacga cgcccagccc cagtccttcg cgcgtcaatg tcccggacca ggagcgacca
     1381 gcggcggcag cctgtgcgag gatccggtcc ggcgacaggc ccttaacgcc tcacatcctg
     1441 ggcggcatac cggtggctct gggcgtctat ccccacatgg cggccatcgc atacaacacc
     1501 ttcgatacag tggacttccg ctgtggcgga tcgctcatcg ccagtcgctt cgtcctcaca
     1561 gctgcccact gcgtgaatag tgatagcaca acgccggcct tcgtccgctt gggtacggtg
     1621 gccatcgaga atcccacggc gggcttccag gacatcaatg tgattgacgt ccagattcac
     1681 ccgaactata cgagcagtag taaatacaat gatatcgcca ttttggaact ggcggaggat
     1741 gccaaggagt cggacaccat tcgtcctgcc tgtctgtaca ttgatcgcgc aggtcctccc
     1801 attgactcca aagttttcgt cgccggttgg ggcgttatga atgtgaccaa tcgcgccagg
     1861 tcaaagatcc tgctgcgtgc tggcctggat ctggtgcccg tggacgagtg caacgcctcc
     1921 ttcgccgaac agcccagcac cattcgggcc ttgaagcagg gcgtcatcga ttcgctgctg
     1981 tgcgcggcgg acaagaagca ggtgaaggac gcctgccagg gcgattccgg tggtccgctc
     2041 atcctcgaaa cggacgaggt ggacggcctc tactcggtcc tgggcgtaat caactcgggt
     2101 ttcggctgcg ccaccaaaac accgggcctc tatacgcgag tcagctcctt cctcgactat
     2161 atcgagggta ttgtgtggcc cgctaaccgg gtgtgattag acttttgatc tgcaataaat
     2221 ttagtttgaa cgga