Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017146960 3457 bp mRNA linear INV 09-DEC-2024 7 (Pgant7), mRNA. ACCESSION XM_017146960 VERSION XM_017146960.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146960.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3457 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3457 /gene="Pgant7" /note="N-acetylgalactosaminyltransferase 7; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108060999" CDS 499..2274 /gene="Pgant7" /codon_start=1 /product="N-acetylgalactosaminyltransferase 7" /protein_id="XP_017002449.1" /db_xref="GeneID:108060999" /translation="MRVSTIRSGRICRLALCLLVLLPLLYLLANWSDHHKRVQEAYHT RFGGPKFAHQRLEGRPREVPKLVEGLGNFEPKDVKPRSGPGENGEAHSLSPDKKHMSD ASEMEYGMNIACSDEISMHRSVRDTRLEECRHWDYPFDLPSTSVIIVFHNEGFSVLMR TVHSVIDRSPTHMLHEIILVDDFSDKENLRTQLDEYVLQFKGLVKVIRNKEREGLIRT RSRGAMEATGEVIVFLDAHCEVNTNWLPPMLAPIYRDRTVMTVPIIDGIDHKNFEYRP VYGTDNHFRGIFEWGMLYKENEVPRREQRRRPHNSEPYRSPTHAGGLFAINREYFLEL GAYDPGLLVWGGENFELSFKIWQCGGSIEWVPCSRVGHVYRGFMPYNFGKLASKKKGP LITINYKRVIETWFDDTHKEYFYTREPLARYLDMGDISEQLALKKRLNCKSFQWFMDH IAYDVYDKFPGLPANLHWGELRSVASDGCLDSMGHQPPAIMGLTYCHGGGNNQLVRLN AAGQLGVGERCVEADRQGIKLAVCRLGTVDGPWQYNEHTKHLMHRVHKKCMALHPATQ QLSLGHCDVNDSYQQWWFKEIRPRW" misc_feature 931..1854 /gene="Pgant7" /note="pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; Region: pp-GalNAc-T; cd02510" /db_xref="CDD:133004" misc_feature order(943..951,955..957,1042..1044,1132..1134,1141..1143, 1153..1155,1201..1209,1459..1464,1528..1533,1537..1539, 1612..1614,1621..1623,1636..1638) /gene="Pgant7" /note="ligand binding site [active]" /db_xref="CDD:133004" misc_feature order(1201..1203,1207..1209,1612..1614) /gene="Pgant7" /note="Mn binding site [active]" /db_xref="CDD:133004" misc_feature 1888..2256 /gene="Pgant7" /note="ricin B-type lectin domain, beta-trefoil fold, found in polypeptide N-acetylgalactosaminyltransferase 7 (GALNT7) and similar proteins; Region: beta-trefoil_Ricin_GALNT7; cd23437" /db_xref="CDD:467315" misc_feature order(1939..1950,1972..1974,1978..1980,1987..1989, 2002..2007) /gene="Pgant7" /note="putative sugar binding site [chemical binding]; other site" /db_xref="CDD:467315" misc_feature order(2059..2070,2080..2082,2086..2088,2095..2097, 2110..2115) /gene="Pgant7" /note="putative sugar binding site [chemical binding]; other site" /db_xref="CDD:467315" misc_feature order(2176..2187,2203..2205,2209..2211,2218..2220, 2233..2238) /gene="Pgant7" /note="putative sugar binding site [chemical binding]; other site" /db_xref="CDD:467315" polyA_site 3457 /gene="Pgant7" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aagcttaata acccaatttt acatatttta catacatatt ttcacgataa cccattcaag 61 ctatcgccta tcgctgtttg cacctatttc tggcctaacg cctgcgcgaa aaaacctcaa 121 aacgcgttct taccagttga acattcgacc attttttgtt gtttacgttt gcaccgcgaa 181 tattcgtgca cctgcactcg caatttgttc tgtgtgccag cggcgcttct tcgccggcca 241 gttgctacac actccacgat cgagcggcca cacattcccc acagcggacg agctgctgga 301 ctccagttgg gtttcgattt tcgtttctgg ccgggcgcct ttgatcttcg tcggcatctc 361 cgagcgacga aagtggttct tttgttctgc tttctggccg cctcttcttc tcctcctcct 421 cctcttcttc ttgttctgtt tgtggccacc tagacacgtc aacagattgg ggaactggtt 481 aactggagca gcttcgagat gcgcgtgagc accatccgca gcggtcggat ctgccggctg 541 gctttgtgcc tcctggtgct gctgccgctg ctctatctgc tggccaactg gagcgatcac 601 cacaagcggg tccaggaggc gtaccacacg cgcttcggcg gccccaagtt cgcccaccag 661 cggctggagg ggcgaccaag ggaggtgccc aagctggtcg agggtctggg caacttcgag 721 ccaaaagatg tgaagccacg tagcggaccc ggcgagaacg gagaggccca cagcctgtcg 781 cccgacaaga agcacatgtc ggacgcctcc gagatggagt acggcatgaa catcgcctgc 841 tccgacgaga tatcgatgca ccgatcggtg cgggacacgc gcctggagga gtgccgccac 901 tgggactacc ccttcgatct gcccagcacc agcgtcatca ttgtcttcca caacgagggc 961 ttctcggtgc tgatgcgcac cgtccactcg gtcatcgacc gctcgcccac gcacatgctg 1021 cacgagatca tcctcgtgga cgacttctcc gacaaggaga acctgcgcac ccagctggac 1081 gagtatgtgc tgcagttcaa gggactggtc aaggtgatta ggaacaagga gcgcgagggt 1141 ctcatccgaa cgcgttccag aggagccatg gaggccacag gcgaggtgat cgtcttcctg 1201 gacgcccatt gcgaagtgaa caccaactgg ctgccgccga tgctggcgcc catttaccgg 1261 gatcgcactg tgatgaccgt gccgatcatc gatggcatcg accacaaaaa cttcgagtat 1321 cgtccggttt acggaacgga caaccacttc cgcggcatct tcgagtgggg catgctgtac 1381 aaggagaacg aggtgccgcg ccgcgaacag cgccgccgtc cgcacaactc ggagccctac 1441 cgcagtccca cccacgccgg cggcctgttc gccatcaata gggaatactt cctggagctg 1501 ggcgcctacg atcccggtct gctggtctgg ggcggcgaga acttcgagct gagcttcaag 1561 atctggcagt gcggcggcag catcgagtgg gtgccctgct cgcgcgtcgg ccacgtctat 1621 cgcggcttca tgccctacaa tttcggcaag ctggccagca agaagaaggg cccactgatc 1681 actatcaact acaagcgcgt catcgagacg tggttcgatg acacgcacaa ggagtacttc 1741 tatacgcgcg aaccgctggc ccgctatctg gatatgggcg acattagcga gcagctggct 1801 ctgaagaagc ggctgaactg caagagcttc cagtggttca tggaccacat tgcctacgac 1861 gtctacgaca agttcccagg cctgccggcc aatctgcact ggggtgagct gcgctcggtg 1921 gcctcggacg gatgtctgga ctccatgggt caccagccgc ccgccataat gggcctaacc 1981 tactgccatg gcggaggaaa caaccaactg gtcaggctca atgccgctgg acaattgggc 2041 gtgggcgagc gctgcgtgga ggccgatcgg cagggcatca agctggccgt gtgtcgcctg 2101 ggaacagttg acggcccttg gcagtacaat gagcacacga agcacctgat gcaccgcgtc 2161 cacaagaaat gcatggccct gcatccggcc acccagcaat tgtctttggg ccactgcgat 2221 gtcaacgata gctaccagca gtggtggttc aaggagatac gcccgcgctg gtaagtccag 2281 cgaggaagat gcagcagcag gaggatcgaa ggatggatca caagggtttc agccggggca 2341 aaataagggg gcgatatttt agacaaaagc aatttagtga aaatgagaaa tggaattgtt 2401 gttggttttg taacgcaaac aagtatatac acaaacgaaa gaagaaaaag aaaaaacaaa 2461 catgataaat aacacataag catttatgta acgcactgta caaatgcact gttggcacat 2521 ggaaatcctc taagtgaatc tagggtccag gccagggcat cgaatgctgg gtggacaaat 2581 ctgcgacgat attattaaag cttaggcgct ccgattttgt gcaacaattt cgtaaagacc 2641 ttttttttgg attgtaaatc tcaaaatttg atttactgta ttatgttagg cgaattgctt 2701 ttagactata tttgtaagtg ctttcacaga tattaccagt aatataaatg tgcaattttt 2761 taaatcgatt tgtgtgttca aagaatgttt tgtaatagca ttttaaagga ttgaattaaa 2821 atgatcaaaa gtcacttagt gtagaataaa aatcatcaca attggttatc atcacatggt 2881 tattgccgaa tctcatacaa tagttattcc aatgattatt aggatcccag cttgggggat 2941 ttccatgccg gccctgtgtg tctttgcgat tgagtgagag aatgcgatag agatagagaa 3001 cgggagcgaa atagaaagag atggcgtatc gagtgcaata gaggatttat ggatttacgg 3061 aacgcgatag attgttttgc tttatgattg ccaacacgaa ttaatgtact aaccttagtc 3121 tgtacttctg taactctgta actccaacta accttagctt agttccgatg ctgccacatt 3181 ccaatctaat cgattataac ccaatcaaat ccgaaccgaa ccgatcgagt ctgcagccaa 3241 gctcggctcc ttaacttttt acgtaacatt ttctgttcga tttcttgcga tttccgctaa 3301 gctctctgtc gtaatcgtaa ttgagatcgt tgcaagtgct tcgggagttt gatttttgaa 3361 aacaatattt tacattcatg tgtaacttta gagttatcga taagtctgaa taatagcata 3421 gaaataaaca agttttctaa acactttacc ttgtaaa