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LOCUS XM_017146950 3582 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017146950 VERSION XM_017146950.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146950.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3582 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3582 /gene="Wnt5" /note="Wnt oncogene analog 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060992" CDS 165..3008 /gene="Wnt5" /codon_start=1 /product="protein Wnt-5 isoform X1" /protein_id="XP_017002439.2" /db_xref="GeneID:108060992" /translation="MICFTRRHFLLWLLRALCMLHLGPRRSAYATVGLQGVPTWIYLG LKSPFIEFGAQEEQLANSSIPLNMTKDEQANMHQEGLRKLGTFIKPVDLRDSATGFVK ADLTKRLVFDSQNSSGSSFSRSHIHPIQEEMDQKQIILLDEDTDENGLPASLTDEDRK FIVPMALKNISPDPRWAITTPVPASSAAGHTTVVPPPSPLAQVEGDPTSNIDDLKKHI LFLHNMTKSNSNFESKFVKFPSLQKDKPANGKRPQRPVHQYSAPIAPPTPKVPPLDAA GAAIGGYYQNEELATNQSFLKPTETATSNAQPGVQPGIPKSASEPQVILLNESLASEP TPEPLQPSKAGTSRTTKRPPCLRNPESPKCIRQRRREEQQRQRERDEWFRGQSQFMQP RFEPIIQTINNTRRFAVSIEIPDSFKVSSEGSSSSDGGELLTRVARSQPSRKLMPDYI KVSAENHTTAADYFKHDVVMASASEREFLIKNMEEQANDTSSTTSDAYSETIDLNPSN CYSAIGLSSSQKKQCVKHTSVMPAISRGARAAIQECQFQFKHRRWNCSTTNDETVFGP MTSLAAPEMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHDDWKWGGCGD NLEFAYKFATDFIDSREKETNRETRGVKRKREEIKNRMHSDDTNAFSSNKSETNGRKT EENFDQHLLELEQRITKEILTSKIDEQEMIKLQEKIKQEIVNTKFFKSNQQEQQQQQP PRKKKRKNQRAAADAPAYPRNGIKESYKDGLLPRSSATAKARSLMNLHNNEAGRRAVI KKARITCKCHGVSGSCSLITCWQQLSSIREIGDYLREKYEGATKVKINKRGRLQIKDL QFKVPTAHDLIYLDESPDWCRNSHALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTK NIVVNERCNCKFHWCCQVKCEVCTKVLEEHTCK" misc_feature 1689..3005 /gene="Wnt5" /note="Wnt domain found in protein Wnt-5a, Wnt-5b and similar proteins; Region: Wnt_Wnt5; cd19337" /db_xref="CDD:381711" misc_feature order(2580..2585,2592..2600,2622..2624,2940..2942, 2946..2948,2952..2954,2958..2960) /gene="Wnt5" /note="Frizzled receptor binding site [polypeptide binding]; other site" /db_xref="CDD:381711" ORIGIN 1 ttatcgaaag acatttttca ttcgcatcct aaaatcgtaa catcgtaaca tcgtaacatc 61 ggatccctaa atatcccgaa tatccccact cccgagggat aggatagttg taataattag 121 tatttataga tattatagca atagtatata taacgagcca cgcgatgatt tgcttcacaa 181 gaaggcactt tctactgtgg ctcctgcgcg cactgtgtat gttgcacttg ggaccgcgac 241 ggagtgcata tgccacagtt gggctgcaag gagtgccgac ctggatatac ctcggcctca 301 agtccccctt catcgagttc ggggcgcagg aggagcagct ggccaactcg agcataccgc 361 tcaacatgac caaggacgag caggccaata tgcatcagga gggtctccgc aagctgggca 421 cgttcatcaa gccggtggac ctgcgggact cggcgactgg cttcgtgaag gccgatctca 481 ccaagcgact ggtcttcgat tcgcagaata gcagcggtag cagcttttcc cgctcccaca 541 tccatcccat ccaggaggag atggaccaga agcagatcat cctcctggac gaggacaccg 601 acgagaacgg gctgccggcc agcttgaccg acgaggatcg aaagtttata gtgccgatgg 661 ccctgaagaa tatctcgccc gatccccgct gggccatcac cacaccagtt ccggcctcct 721 ccgccgctgg ccacacaacg gtggtgcctc ctccgtcgcc cctggcccag gtggaaggcg 781 atcccacctc caatatcgac gacctgaaga agcacatcct cttcctgcac aacatgacca 841 agagcaactc gaacttcgag tccaagttcg tcaagttccc cagcctgcag aaggacaagc 901 cggcgaacgg gaagcgtccc cagcggcccg tccatcagta ctcggcgccc atagcaccgc 961 ccacgccgaa ggtgcctccg ctggacgccg ccggagcagc cattggtggt tactatcaga 1021 acgaggagct ggccactaat caaagctttc ttaaaccaac agagacagcc acctcgaatg 1081 cccagccggg agtccagccg ggaatcccca agagcgccag cgaaccgcag gtgatactgc 1141 tcaacgaatc gctggccagc gagcccactc cggagcccct gcagcccagc aaggcgggca 1201 cctcgcgcac cacgaagcgt ccgccctgcc tgcggaatcc cgagtcgccc aagtgcatcc 1261 gccagcggcg gcgggaggag cagcagcggc agcgggagcg cgacgagtgg ttccgcggcc 1321 agtcgcagtt catgcagccc cgcttcgagc ccatcatcca gacgatcaac aatacccgtc 1381 gctttgccgt ctccattgag atcccggact cgttcaaggt ctcctccgag ggatcctcct 1441 cctccgatgg cggcgagctg ctgacgcgcg tggcccgctc ccagccgagc aggaagctca 1501 tgccggacta tataaaagtg agcgcggaga accacacaac cgcggcggat tacttcaagc 1561 acgacgtggt gatggcctcg gccagcgaga gggagtttct catcaagaat atggaggagc 1621 aggccaatga cacctcctcc accaccagcg acgcctactc ggagaccatc gacctgaatc 1681 ccagcaactg ctacagcgcc atcggtctga gcagcagcca gaagaagcag tgcgtcaagc 1741 acaccagcgt gatgccggcc atcagtcgcg gcgcccgggc ggccatccag gagtgccagt 1801 tccagttcaa gcatcgccgc tggaactgca gcacgacgaa cgatgagacg gtctttggac 1861 cgatgaccag cctggccgca ccggagatgg cttttatcca tgccctcgca gccgccacgg 1921 tcaccagctt cattgcgcgc gcctgtcgcg acgggcagct ggccagctgc agctgctcgc 1981 ggggatcgcg gcccaagcag ctgcacgacg actggaagtg gggcggctgc ggcgacaatc 2041 tggagtttgc ctacaagttc gccaccgact ttattgactc gcgggagaag gaaacaaacc 2101 gcgagacgcg cggcgtgaag agaaaacgcg aggagatcaa gaatcgcatg cattcggatg 2161 atacgaatgc ctttagcagt aacaaaagtg agacgaatgg tcgcaaaacc gaggagaact 2221 tcgatcagca tctgctggag ctggagcagc gcatcaccaa ggagatactg acctccaaga 2281 ttgacgagca ggagatgatc aagctgcagg agaagatcaa gcaggagatt gtcaacacca 2341 agttctttaa aagcaatcag caggagcagc agcagcagca gccaccgcgc aagaagaagc 2401 ggaaaaatca gcgagcggcg gcggatgcgc ccgcctatcc gcggaatggc atcaaggaga 2461 gctacaagga tggcctgctg ccgcgcagct cggccacggc gaaggccagg agcctgatga 2521 acttgcacaa caacgaggcc ggccgacggg cggtgatcaa gaaggccagg atcacgtgca 2581 agtgccatgg agtttccgga tcgtgcagct tgatcacctg ctggcagcag ttgtcctcga 2641 tccgcgagat cggcgactat ctgcgcgaga agtacgaggg cgccaccaag gtgaagatca 2701 acaagcgcgg acggctgcag atcaaggact tgcaattcaa ggtgccgacg gcccacgatc 2761 tgatctacct ggacgagagc cccgactggt gtcgcaacag ccacgcgctc cactggccgg 2821 gcacacacgg ccgggtgtgc cacaagaact cgtccggcct ggagagctgc gccatcctct 2881 gctgcggccg gggctataat acgaaaaaca ttgtcgttaa cgagcgttgc aactgcaaat 2941 tccactggtg ctgccaggtc aagtgcgagg tctgcacgaa ggtgctcgag gaacacacat 3001 gtaaatagag tagagttctt gggcgcgaca cgtaggcgta ggatcgcgtt gaaattcaaa 3061 tgtcttaatg tttgtgacta agccatgaaa ggaaaataat cgtatttaaa acaaaataat 3121 tatttattga aattacattt aaattaatat gattctacct aataatttgt actaatttac 3181 tagtttaccg gctttctaag cactacccac ataaattcga cagctaaata agagcccccc 3241 tttttaaatt gcaaaacgac atattgcttc ttcaaattaa atgctaagaa acgaaaaatg 3301 aaaaaaaaca ctgctaaaca aaaccacctt acttatgtat agcttttaga aatcattagt 3361 tctaagtata attctggtag ggttggcctt cttaaaaaca aaaaagaaaa tagtgaaggt 3421 ttcaacacaa ttttaaagaa ctgttgtatt ttttttaatt aagataatat tactgatata 3481 taatattaaa tatattactg aatggaataa gtcataaaag cgggacgttt ctttctttag 3541 ctttaatggt tttcgagagt tatttagctt ctatggataa ca