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LOCUS XM_017146947 2962 bp mRNA linear INV 09-DEC-2024 binding protein B (CrebB), transcript variant X4, mRNA. ACCESSION XM_017146947 VERSION XM_017146947.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146947.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2962 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2962 /gene="CrebB" /note="Cyclic-AMP response element binding protein B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108060990" CDS 741..1724 /gene="CrebB" /codon_start=1 /product="cyclic AMP response element-binding protein B isoform X2" /protein_id="XP_017002436.2" /db_xref="GeneID:108060990" /translation="MDNSIVEENGNSSAASGSNDVVDVVAQQQAAAAGGGGGGGGGNP QQQQQNNPQSTTAGGPTGATNNAQGGGGVGATVLTTTANCNIQYPIQALAQHGLQVQS VIQANPSGVIQTAAGTQQQQQQQALAAATMQKVVYVAKPPNSTVIHTTPGNAVQIPPT FPCKIKPEPTTQHPEDSDESLSDDDSQHHRSELTRRPSYNKIFTEISGPDMSGASLPM SEGVLNSQLAGSGAGGNPANSSLMQLDPTYYLSNRMSYNTNNSGIAEDQTRKREIRLQ KNREAARECRRKKKEYIKCLENRVAVLENQNKALIEELKSLKELYCQTKND" misc_feature <1299..>1370 /gene="CrebB" /note="pKID domain; Region: pKID; pfam02173" /db_xref="CDD:396650" misc_feature 1548..1709 /gene="CrebB" /note="Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain; Region: bZIP_CREB1; cd14690" /db_xref="CDD:269838" misc_feature 1551..1709 /gene="CrebB" /note="coiled coil [structural motif]; Region: coiled coil" /db_xref="CDD:269838" misc_feature order(1551..1553,1563..1565,1569..1577,1581..1589, 1593..1598,1602..1610) /gene="CrebB" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:269838" misc_feature order(1605..1607,1614..1616,1626..1631,1635..1640, 1647..1652,1656..1661,1668..1670,1677..1682,1689..1694, 1698..1703) /gene="CrebB" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:269838" polyA_site 2962 /gene="CrebB" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgtcacactg ctgccacggt cacactgtca ataataagcg aacgattttt gcgcaaaaaa 61 aacggagttt atcaataaat cgttgcgtgc gattgcgttg accgtcgaaa acgcgttcgt 121 tctcgtgcag aatccgcaaa tgcagggctt ttagcgccca aaattcgcga ttcagtgctg 181 cgaaaagaaa aaagaacgta agcaacgata acaacaggca gcgagagcga gtgagagggc 241 aagagagcga gcgagggagc agtgcggagt gttgtgtgtg tgcgtgctgc caacttgtcg 301 caccaattcg ctgctgagcc gaactgtgtg tgtgtgtgtt ctgtgcggtt ctaccaagtt 361 aaagagaaaa aaatcgaaat cctttgcgcg atgctatcct aaaacccctt tgaagttcta 421 ggattctacg tctggcttcc ccaaccgatt tgctggccat atccgttata tagaatttcc 481 tggcgagagc gacttttcaa caagttgcca gcgcagcgtg caacgcgcgc acacacacac 541 tcgcaggcga gcaaacacac gcgcaagaga gagagagaga gcgaacaaca acaacaaaag 601 cttctcagca gcaacgtttt tagtgatgtc atcagaaaaa acctcttcaa gctggccaaa 661 ttgaagcgga aacggtagcc aaactgaagc acttgtcgga gagcgtctcg gtgctgctga 721 agatcgccag gatcgccaac atggacaaca gcatcgtcga ggagaacggc aactcgtcgg 781 cggcatcggg ctccaatgac gtggtcgacg ttgttgccca acaacaggcg gcggcagcgg 841 ggggtggcgg aggaggagga ggaggtaacc cccaacagca acaacaaaac aacccacaaa 901 gtacaacggc cggcggtcca acgggggcga cgaacaacgc ccaaggagga ggaggagtag 961 gagccaccgt gctgaccacc accgccaact gcaacataca ataccccatc caggcgctgg 1021 cgcagcacgg actgcaggtg caatccgtga tacaggccaa tccctcgggg gtcatacaga 1081 cagcagctgg gacccagcag cagcagcagc aacaggcgct ggccgccgcc acgatgcaga 1141 aggtggtcta cgtggccaag ccgcccaact cgacggttat ccacacgaca cccggcaatg 1201 cagtgcaaat ccctccaacc tttccgtgca agatcaaacc cgaaccgacc acgcagcatc 1261 cggaggacag cgacgagagt ctgtcggacg acgattccca gcaccaccgc agcgagctga 1321 cgcgacggcc gtcgtacaat aagatcttca cggagatcag cggacccgat atgagcggcg 1381 catcgcttcc catgtccgaa ggcgtgctca attcccagct ggcggggagc ggagcggggg 1441 gcaatccggc gaacagctcc ctgatgcagt tggaccccac gtactacctg tccaatcgga 1501 tgtcctacaa caccaacaac agcgggatag cggaagatca gacccgcaag cgagagatcc 1561 ggctgcagaa gaacagggag gcggcgcggg agtgccggcg caagaagaag gagtacatca 1621 agtgcctgga gaatcgagtg gcggtgctag agaaccaaaa taaagcgctc atcgaggagc 1681 tcaagtcgct caaggagctc tactgtcaga ccaagaacga ttgaatgtgg ggccgggctc 1741 tggcgccgct tgtgcctccg cctccgcttc cggcaatggc aaaggcgaag gcgaaggctg 1801 ctgctccgtt ctggataacg cccgacagca gcgatggatc gatcctcatc ctcatcgttg 1861 gccggccgca tatcatgatt tatatacgta taggatgcta tatgtggtat agcgtgtaca 1921 ttaactgtgt gacgaggagc gggatcgtgt tgttgttagg acaggcagac agacagaatg 1981 acagacagtt ggacgggaca gatggataga tctaacctga cctgaccgat cgacctgatc 2041 gacggagcag aacacacaat gtaattatgt ttataattta aagatgtaat attatgttta 2101 tgatttagtt tatgccttag tttatttgct aatttaacga tactgaagtt tacctacgaa 2161 catgtgtttc tgtagtatcc taagacctcc ttttacccaa acggatactt cactccgcac 2221 agaccttttg taattaaatt tttttgtttt acctaattcg taattatcga aagtgttttt 2281 tcttagcgaa ttgttgtaag ccaatatgtc aggatatagt caacgccccc cgcccccgcc 2341 ccccctggga ggatatgcag ataggaaaga tacatagata gaaaggtaga aaagagcgaa 2401 agggagcctc ccaataaaaa ttgttcaaaa atcgcaagtt tcacttgatt tatatgtgcg 2461 tgtacgtgtg tgccggccga ttcgaactgt aaaatttggt tttaaacgta ttggggcata 2521 gaattaaata attcaaatat catttgttgt tgcataattt taaacgaatc gagaaaatcc 2581 tcgcttttgc ttgttttttg tgtagttagc gaacactatt tcctttgttg ttttgaattt 2641 tttttttgga atcggagaga gatatgtggg ggaaaaatca tcgaaaatag aggaagtttg 2701 gccggaacac acgtaggcat atatgcatta tatacatttt tatatatata aagcaaacac 2761 tctcgttatc tcttgtgatc aactcagttg ttgttatgaa tgaatgaatt aaggtggaaa 2821 aacagacgaa ggggcggaca aatacgataa attaatgatg aattcgggag acagagatcg 2881 aacttttata tctagagtag cgcaacggaa acaatgtcaa aatgaaaacc ggaaacggaa 2941 ataaaaccat aagaaaaaca tg