PREDICTED: Drosophila takahashii somatomedin B and thrombospondin

LOCUS       XM_017146888            1608 bp    mRNA    linear   INV 09-DEC-2024
            type 1 domain containing protein vexed (vex), mRNA.
ACCESSION   XM_017146888
VERSION     XM_017146888.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017146888.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1608
                     /gene="vex"
                     /note="somatomedin B and thrombospondin type 1 domain
                     containing protein vexed; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108060939"
     CDS             130..1260
                     /gene="vex"
                     /codon_start=1
                     /product="uncharacterized protein vex"
                     /protein_id="XP_017002377.2"
                     /db_xref="GeneID:108060939"
                     /translation="MSMLLLLLAGQLLLLPLVAGGSCREAQLCCNGRDSSCVVQKAPI
                     NAIIEDLSDKPCYCDHACLKLGDCCDDFKDHCGVLDCQVGDWGAWSECDKGCGTGMMT
                     RNRQILQAAQNGGKHCPTLEQKRSCQGYRCHGHHDKKILHEMALLLPAALSHNRHIND
                     STDIRRNLRTRYRDSYKHNHDHEYCVEFEVIKASKACHKLPPYNLMLEGDRITVRCDL
                     EALIQDSVASSTTARTPQGPNPPTSTTAAASSSGQRADDLEENSSDGDDQDTEAEEEE
                     EEQEQEEQDDLQNALDTESNESSDYRHQRSHSRRTAGKRSAAVPATPPPTLAPTYHCR
                     GEGLAGRTTRWSALPAPSCRGKWLRLTVGPPKKCGHAQFIFV"
     misc_feature    <283..360
                     /gene="vex"
                     /note="Somatomedin B domain; Region: Somatomedin_B;
                     pfam01033"
                     /db_xref="CDD:460034"
     misc_feature    370..525
                     /gene="vex"
                     /note="Spondin-like TSP1 domain; Region: TSP1_spondin;
                     pfam19028"
                     /db_xref="CDD:465948"
ORIGIN      
        1 ccggctttcg cagcgtgcgc ctcgtaaccc cggaattttg gccgtgttta tcttagccca
       61 attcgaacgt aacgaacgcc aaatccgcac atagaccgca tttcgatccg attcggcgag
      121 acaacgacga tgtcgatgct gctgctcctt ttggccgggc agctcctgct actgcccctc
      181 gtcgccggcg gctcctgtcg ggaggcgcag ctctgctgca atggccgcga ctcgtcctgc
      241 gtcgtccaga aggcccccat taacgcaatc atcgaggacc tcagcgacaa gccctgctac
      301 tgcgaccacg cctgcctcaa gctcggcgat tgctgcgacg acttcaagga ccactgcgga
      361 gtgctggact gccaggtggg cgattggggc gcctggagcg agtgtgacaa gggctgcggc
      421 actgggatga tgacgcggaa ccgccagatc ctgcaggcgg cccaaaacgg aggaaaacac
      481 tgccccacat tggagcagaa gcgcagctgc caaggatacc gctgccatgg acatcacgac
      541 aagaagattt tgcacgaaat ggccctgctc ctgccagctg cactctcgca caatcgtcac
      601 atcaacgaca gcactgatat ccggcgcaat ctgcgcacgc gctaccgcga ctcctacaaa
      661 cacaaccatg atcatgaata ttgcgtggaa tttgaggtaa taaaagcctc caaggcctgc
      721 cacaaactgc cgccatacaa cctgatgcta gagggcgacc gtataacggt gcgctgtgac
      781 ctggaggcgt tgatccagga ctctgtggcc agctccacca ccgccaggac accgcagggc
      841 cccaatccgc cgaccagcac caccgctgcc gcctcctctt ccggccagcg ggcggatgac
      901 ctagaggaga acagcagtga cggcgacgac caggacacgg aggcggagga ggaggaggag
      961 gagcaggagc aggaggagca ggacgacctg cagaacgccc tggacacgga gagcaacgag
     1021 agttccgatt accgccacca gcggtcgcac agccgccgga cagcgggaaa acgcagcgcc
     1081 gccgtgccgg ccacgccccc gcccacgctg gcgcccacct accactgccg gggggagggg
     1141 ctggccgggc gcacgacacg ctggagcgcg ctgccggcgc cgtcgtgccg cggcaagtgg
     1201 ctgcgcctga ccgtcggacc gcccaagaag tgcggccacg cccagttcat cttcgtctaa
     1261 ggcgatcact tttttttttg tccccgtgta ggttatggtg tacggttatg gtgccccccc
     1321 atcatatcat atcatatcac ccgcaaaccc ccgcccccaa gcacccccgc aagcacccgt
     1381 ccccccttca ctttcggccc aaataaaagt agcccatcgt atgtaagcgt ttaaacatta
     1441 agccagtgga ttaagaagat cttagcatat gtgtgtgagg tcaggatttt tttttgtctc
     1501 tctagagtag cgatccggaa gatagagtat tagaaatcca ttttcaatgg atatttcaat
     1561 gggaatttca aaactttctt ataacacgaa tccaatacat tatctttc