PREDICTED: Drosophila takahashii rhythmically expressed gene 2

LOCUS       XM_017146880             902 bp    mRNA    linear   INV 09-DEC-2024
            protein (LOC108060933), mRNA.
ACCESSION   XM_017146880
VERSION     XM_017146880.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017146880.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..902
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..902
                     /gene="LOC108060933"
                     /note="rhythmically expressed gene 2 protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:108060933"
     CDS             31..771
                     /gene="LOC108060933"
                     /codon_start=1
                     /product="rhythmically expressed gene 2 protein"
                     /protein_id="XP_017002369.2"
                     /db_xref="GeneID:108060933"
                     /translation="MSLTSQLVTNLKRFRLVTFDVTDTLLRLEDPLRHYRRTAEEFGV
                     TGVDRRRLEHCFRQQFKAMSGEHPNFGRFSPGLDWQQWWLQLVSRTFGCVDPDASPEK
                     LERIGQRLITLFRTSACWNHVDGAQELVHCVRSAGKCVGIISNFDPSLPKVLDAMGFA
                     GQFDFILTSYEAGVMKPDPGIFEIPLKRLQIPADQALHIGNKLDLDYEGARNCGWSGL
                     LVNDADNPHSFPTLSKLLEGLKTQQIEW"
     misc_feature    73..687
                     /gene="LOC108060933"
                     /note="REG-2-like, HAD superfamily (subfamily IA)
                     hydrolase; Region: DREG-2; TIGR02252"
                     /db_xref="CDD:274056"
     polyA_site      902
                     /gene="LOC108060933"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tattacgtat acgccacact ggcggccaaa atgtcgttga cttcgcaatt ggttacgaat
       61 ttgaaacgct ttcgcctggt gaccttcgac gtgacggaca cgctgctccg cctggaggat
      121 ccgctgcggc actaccgccg cacggcggag gagttcgggg tgaccggagt ggaccgccgc
      181 cggttggagc actgcttccg ccagcaattt aaggcgatga gcggcgagca tccgaacttt
      241 ggacgcttct cgccgggatt ggactggcag cagtggtggc tgcagctggt gagccgaacc
      301 tttggctgtg tggatccgga cgcgtcgccc gagaagctgg agaggattgg ccagcggtta
      361 attacgctct tccgaacgag cgcctgttgg aatcacgttg atggcgccca ggaactggtg
      421 cactgcgtcc gcagcgccgg caagtgcgtg ggcatcatct ccaactttga tccctcgctg
      481 ccaaaagtcc tcgatgccat gggcttcgcg ggccagttcg attttatcct cacttcctac
      541 gaggcgggcg tcatgaagcc cgatccgggc atcttcgaga ttcccctgaa gagactgcag
      601 atcccggcgg atcaggccct ccacattggc aacaaactgg acctggacta cgagggagct
      661 cgcaactgcg gctggagcgg attgctggtg aatgacgcag acaacccgca ctcctttccc
      721 actttatcca aacttctaga gggtttaaag acccaacaga tcgaatggtg atgcacccaa
      781 agccgaaact cgactcagga ttcgattagc tcatggctgt agttattttg tagatttttt
      841 gtaagtttaa gaaacagaac aggatgtaaa actagtgtta aatataaata ctcgtcattc
      901 ta