PREDICTED: Drosophila takahashii transmembrane p24 trafficking

LOCUS       XM_017146877            1090 bp    mRNA    linear   INV 09-DEC-2024
            protein CHOp24 (CHOp24), mRNA.
ACCESSION   XM_017146877
VERSION     XM_017146877.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017146877.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1090
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1090
                     /gene="CHOp24"
                     /note="transmembrane p24 trafficking protein CHOp24;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins"
                     /db_xref="GeneID:108060930"
     CDS             98..724
                     /gene="CHOp24"
                     /codon_start=1
                     /product="transmembrane emp24 domain-containing protein 2"
                     /protein_id="XP_017002366.1"
                     /db_xref="GeneID:108060930"
                     /translation="MEGPLAKVLLLVGSLLILFRSSQAFIVSVDAHNEECFFENVEGG
                     TKFGVTFEVIDGGFLDVDIKISGPENHVMHESEKESSGKYTFVAPAKGTYTVCFNNER
                     SSMTPKLVMFSIDVGEAPQRAPGAPGEEEVGHTKLEDMIRELSGTLTSVKHEQEYMHV
                     RDKIHRSVNESTNSRVVLWSTFEALVLVLMTVGQVYYLKRFFEVKRVV"
     misc_feature    167..706
                     /gene="CHOp24"
                     /note="emp24/gp25L/p24 family/GOLD; Region: EMP24_GP25L;
                     pfam01105"
                     /db_xref="CDD:426051"
     polyA_site      1090
                     /gene="CHOp24"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acgatctggc atcactcctt cgctacaact cgacaactac gtggctgctg cgcgtttaga
       61 agtgattaaa aacaggcaaa ttgcacccag aataaccatg gaaggcccgc tcgccaaggt
      121 gctgctcctt gtgggcagcc tgctgatcct gttccgctcc agccaggcct tcatcgtcag
      181 cgtggacgcc cacaacgagg agtgcttctt cgagaacgtc gaaggcggca ccaagttcgg
      241 cgtcaccttc gaggtgattg acggcggctt cctggacgtg gacatcaaga tcagcggccc
      301 cgagaaccat gtgatgcacg agagcgagaa ggagtcctcc ggcaagtaca ccttcgtggc
      361 ccccgccaag ggaacctaca ccgtctgctt caacaacgag cgcagcagca tgacgcccaa
      421 gctggtcatg ttctccatcg acgtcggcga ggcgccgcag cgcgcacccg gcgcccccgg
      481 cgaggaggag gtgggccaca ccaagctgga ggacatgatc cgcgagctct ccggcacgct
      541 gaccagcgtc aagcacgagc aggagtacat gcatgtccgc gacaagatcc atcgctcggt
      601 gaacgagagc accaactcgc gggtggtgct gtggtccacc ttcgaggccc tggtgctggt
      661 cctcatgacc gtgggccagg tttactatct gaagcgcttc ttcgaggtca agcgcgtcgt
      721 gtaatcccga ccggaaagcc aggaggagaa gaggagagga gcggcgtact gggggaatgt
      781 gtgcgcaatg tgttgcagtc tcagatttaa tttaaacgat taacatcctt ttgtaattaa
      841 aataaaatac cttgtaaaaa gtaactagtg gctggaaata ttttcaactg tcttgttttc
      901 gcttcgagaa ccattaaaaa gcactttcaa tctattagag aaatcaccaa gctaaattaa
      961 tatttgttta ctaaagacca aaaattgaaa cgaattttcc aaatcgaaaa gggacagaaa
     1021 atattttcag acacacattc aatgggggaa ataccacttt gtgtatgttt caattaaata
     1081 ttatgaaaac