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LOCUS XM_017146875 3888 bp mRNA linear INV 09-DEC-2024 regulatory subunit, mitochondrial (LOC108060928), mRNA. ACCESSION XM_017146875 VERSION XM_017146875.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146875.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3888 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3888 /gene="LOC108060928" /note="pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108060928" CDS 148..2961 /gene="LOC108060928" /codon_start=1 /product="pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial" /protein_id="XP_017002364.2" /db_xref="GeneID:108060928" /translation="MWKLLQRSTGLPRRCSPGFPDAVRLLASGGGGGGQVDEQVLRKR KFQPQQAADLSEELAGQLPPKARVVICGGGITGASVAYHLGLSGWGGETLLVEQDRVG GELPWTACGLAGRFEPSYTELKLAEYSIDLIKRLAESGLPTGWRPVGSLNLARSWDRM TAFNRMKSQALAWGMRCEILSPEQCAQHCELLSLDGIEGGLWIPEDGVCDPQLVCQAY MTEAERLGVRIVEHCAIKRIHSEHGKVRGVETTAGDVECEYFVNCTGFWAREVGTLSK PVVKVPLKAVEHHYLHTQPIEGLDPDTPFVRDFDGRIFFRECEGHILAGGFEREAKMV YEDGVIPLSQAARQHPPDWDHFHELLDALLLRVPAFRGAKLDRLTNSLQVFSPDCKWI LGEAPEIQNYYVAAGNKTMGVSASGGIGRVLTDLITRGSTYLDLHILDISRFLGLHNN RKFLRDRCKEAPGKHFEINYPFEEFQTGRNLRMSPIYPQLKEAGAVFGQSMGYERPNY FDQQDKQDEFGLPRFRIAQTRTFGKPPWFDHVASEYRACRERIGIADYSSFTKYDFWS KGNEVVELLQYLCSNDVDVAVGSIIHTGMQNPNGGYENDCSLARLSERHYMMIAPTIQ QTRSMCWIRKHMPGHLRAKVNVADVTSMYTAICILGPYSRILLSELTDTDLTPKSFPF FTYKELDVGLADGIRVLNITHTGELGYVLYIPNEYALHVYSRLYQAGQKFNIQHAGYY ATRALRIEKFYAFWGQDLDTFTTPLECGRSWRVKFNKPIDFIGRQALLKQREEGVKRM YVQLLLNDHDHEVDMWCWGGEPIYRDGVYVGMTTTTGYGYTFEKQVCLGFVRNFDDAG RELAVTNEYVLSGHYEVEVAGVRFEAKVNLHSPNLPTKFPDREREAYHATRDKPDQAD LLSFGGLTTVKGTGTPTDGHGLL" misc_feature 340..1476 /gene="LOC108060928" /note="Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; Region: DadA; COG0665" /db_xref="CDD:440429" misc_feature 1435..1599 /gene="LOC108060928" /note="FAD dependent oxidoreductase central domain; Region: FAO_M; pfam16350" /db_xref="CDD:465100" misc_feature 1579..2799 /gene="LOC108060928" /note="Glycine cleavage system protein T (aminomethyltransferase) [Amino acid transport and metabolism]; Region: GcvT; COG0404" /db_xref="CDD:440173" polyA_site 3888 /gene="LOC108060928" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cttccgatag gccgcaatat tattgaagaa gatccaattt accaagtggt aaactaccaa 61 ttatagtgct tattccgatt cccggcgacc tgcagaggat caggtgtgtt ccatgaggtt 121 gtgatactgt tgcgccggtt ggacaagatg tggaaactgc tgcagcgctc gacgggactt 181 cccaggcgct gctcgccggg atttccggac gcagtgcgtc tgttggccag cggcggcggt 241 ggcggcggtc aggtggacga gcaggtgctg cgcaagcgga agttccagcc gcagcaggcg 301 gcggatctca gcgaggagct ggcgggccaa ttgccgccca aagcccgggt ggtcatctgc 361 ggcggcggca tcactggcgc ctcggtggcc tatcacttgg gcctgagtgg ctggggcggc 421 gagacgctgc tcgtggagca ggaccgcgtg ggcggcgagc tgccctggac ggcctgcggc 481 ctggcggggc gcttcgagcc cagctacacg gaactcaagc tggccgagta ctccattgac 541 ctgatcaagc ggctggcgga gagcggtctg cccacaggct ggcggccagt gggcagcctc 601 aacctggccc gcagctggga ccgcatgacc gccttcaatc gcatgaagtc gcaggctctc 661 gcctggggaa tgcgctgcga gatcctctcc ccggagcagt gcgcccagca ctgtgagctc 721 ctctcgctcg acggcatcga gggcggcctg tggatacccg aggatggggt gtgcgatccg 781 cagctagtct gccaggccta catgaccgag gcggagcgtc tgggcgtccg gattgtggag 841 cactgcgcca tcaagcggat ccacagcgag cacggcaagg tgcgcggcgt ggagacgacg 901 gccggggacg tggagtgcga gtactttgtc aactgcacgg gcttctgggc tagggaggtg 961 ggcacgctga gcaagccggt ggtgaaggtg ccgctgaagg cggtggagca ccactatctg 1021 cacacgcagc ccatcgaggg actcgatccc gacacgccct tcgtccggga cttcgacgga 1081 cgcatcttct tccgcgagtg cgagggccac atcctcgccg gcggcttcga gcgcgaggcc 1141 aagatggtct acgaggacgg ggtgattccg ctgtcgcagg cggcgcgcca gcatccgccc 1201 gactgggatc acttccacga gctgctcgac gccctgctgc tgcgggtgcc cgccttcagg 1261 ggggccaagc tggacaggct caccaactcg ctgcaggtct tctcgcccga ctgcaagtgg 1321 attctggggg aggcgccgga gatccagaac tactatgtgg ccgccggcaa caagacgatg 1381 ggcgtgtccg catccggcgg cattggacgc gtgctcaccg atttgatcac ccggggctcc 1441 acctatctcg acctgcacat cctggacatc agccgcttcc tggggctgca caacaaccgc 1501 aagttcctgc gggatcgctg caaggaggcg cccggcaagc acttcgagat caactacccc 1561 ttcgaggagt tccagacggg caggaacctg cgtatgtcgc ccatctatcc gcagctcaag 1621 gaggcgggcg ccgtcttcgg ccagtcgatg ggctacgagc gacccaacta cttcgaccag 1681 caggacaagc aggatgaatt tgggctgccg cgcttccgga ttgcccaaac ccggaccttt 1741 ggcaagcccc cttggttcga tcacgtggcc tccgagtatc gagcctgccg ggagcgcatc 1801 ggcatcgcgg actacagctc cttcaccaag tacgacttct ggtcgaaggg caacgaggtg 1861 gtggagctgc tgcagtacct ctgctccaac gacgtggacg tggccgtggg ctccatcatt 1921 cacacgggca tgcagaatcc caacgggggc tacgagaacg actgctcgtt ggcccgactc 1981 tccgagcgac actacatgat gattgcaccc accatccagc agacgcgctc catgtgctgg 2041 atccgcaagc acatgcccgg ccacctgagg gccaaggtga acgtggcgga tgtgacctcg 2101 atgtacacgg ccatctgcat cctgggtccc tactcgcgca tcctgctctc cgagctcacc 2161 gacaccgatc tcacgcccaa gagcttcccc ttctttacgt acaaggaact ggacgtgggc 2221 ctggccgatg gaatccgcgt gctgaacatc acccacacgg gcgaactggg ctacgtcctc 2281 tacatcccca acgaatacgc cctgcatgtg tactcgcgac tctaccaggc gggccagaag 2341 ttcaacatac agcatgcagg ctactacgcc acccgtgccc tgcgcatcga gaagttctat 2401 gccttttggg gccaggattt ggacaccttt accacgccgc tggagtgcgg acgcagttgg 2461 cgcgtcaagt tcaataaacc catcgacttc attggccgcc aggcgctgct gaaacagcgc 2521 gaggagggcg tcaagcggat gtatgtgcag ctgctgctga acgaccacga ccacgaggtg 2581 gacatgtggt gctggggcgg cgagcccatc taccgcgacg gcgtgtacgt gggcatgacc 2641 accaccaccg gctatggcta tacgttcgag aagcaggtct gcctcggctt cgttcgcaac 2701 ttcgacgacg cgggacgcga gctggcggtg accaacgagt acgtgctctc cggccactac 2761 gaggtggagg tggccggcgt gcggttcgag gccaaggtca atctgcactc gcccaatctg 2821 cccaccaagt tcccggatcg cgagcgcgag gcctaccatg ccacgcgcga caagccggac 2881 caggcggatc tcctgtcctt cggcggtttg accacggtca agggcaccgg aacgccaacg 2941 gacgggcacg gattgttgta ggcagcaaag gagccggact ccggatcaat atcatctgcc 3001 atctggcatc gttcatttct agttcaactc gagagtctca aaagcaaagc gatattattc 3061 gatttagtac gataggaggg aatcgagcga ttatgagata ggcaaatggt tagtagcaac 3121 caaaaaggga atcaccatat actctttcta gtgaatgtga ggcagactag cttagctagc 3181 caataagata acttttaaat cagcatttga ccctaaaatc cagtagaact caaagatgta 3241 taaaaacaag gctggatttc ttgtttcatg ttcattagaa ggagtatatc tatgctggtt 3301 taccaatgaa aaaatctgta aaatttaatc gttttataaa tggaaagaaa tactgataat 3361 tcgattacta taaaatatga acgccttgac ttagacatcg aaatgatggg tatataaaaa 3421 aagcccaaga aagttcattt tacaacttgt tatatctttt gatttttggt tttgttcgtc 3481 cgtcaggcgt cgtgtcaatt aaacatatag aaataggctt taaatacggt gtatgtctaa 3541 gaatcttccg tgatattgga ataattgaga gttgttttgc acattgttaa aagaaacggc 3601 acaaaaatgt taaaatattt gctcaaagct ggcttagctt catttagcca aggcaactag 3661 ttgggaatac aaaaaaaata aatgaaataa atttaattaa ttcaaattta gataagcgaa 3721 atataggaaa cgtttttgag cagtttttca gacagttttg attgattttt tgtactaacc 3781 cagacgattg actttgtaaa ttatggtgtg cgaccgtata aaccacaccc catattatat 3841 aaatcatatt gtactatatt tatacaaata catatactct ttacagaa