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LOCUS XM_017146860 2475 bp mRNA linear INV 09-DEC-2024 (Tango5), transcript variant X4, mRNA. ACCESSION XM_017146860 VERSION XM_017146860.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146860.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2475 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2475 /gene="Tango5" /note="Transport and Golgi organization 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108060916" CDS 141..1616 /gene="Tango5" /codon_start=1 /product="vacuole membrane protein 1 isoform X1" /protein_id="XP_017002349.2" /db_xref="GeneID:108060916" /translation="MSQHSKKDGSSSGSGNGSGSHAGNNKSHKRQAANGSLKAQSTSH SHSQTPSKSPSGSSNSNSSSSSRSLSGSSMQAPPPTKKNQKDKQRERERAERSQLVLW RRPLQTTKYCGLELAALLRTWSTRLLQQRLLLAALIVLGIVFSVIYKIDGPHQLAIEF VRRNTWFFVYWLGLGVLSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSLRFPQPPYP DDIICPEEPYDKRVPNIWSIMSKVRMEAFLWGAGTALGELPPYFMAKAARLSGYDPED AEELAEFEALNAKRHQKNLSLMDKGKLFMERVVERVGFFGILACASIPNPLFDLAGIT CGHFLVPFWTFFGATLIGKAVIKMHIQKIFVIIAFNETLIERAVDLLASLPLLGHKLQ EPFKSFLKNQKQRLHRQQRGSGGSASGAGDSGNLLSRIFETFVIGMVCYFVVSIVNSL AQSYHKRLHKKPATGAATTPTRLAAGAAPSKKAGKQKALRD" misc_feature <1056..1205 /gene="Tango5" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:469768" polyA_site 2475 /gene="Tango5" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttagaaaaa cttaacactt attgaattat ggcgaaacac gctgactgag acaaaaacaa 61 aagaacaaaa agggggagaa gtgggggaaa agtgaaataa caacaacaac aacaacgccg 121 cttgcaagcc aaccgcttaa atgtcacaac actcgaaaaa ggacggcagc agtagcggaa 181 gcggtaacgg cagcggtagc catgccggca acaacaagag ccacaagcgg caggcggcca 241 acggcagtct gaaggcacag tcaacctccc actcccacag ccaaacgccc tcgaaatcgc 301 ccagcggcag tagtaatagc aacagtagca gcagcagcag aagcctcagc gggagcagca 361 tgcaggctcc tcctccgacg aagaagaacc aaaaagacaa gcagcgcgaa agggagcgcg 421 cggaacgcag ccagctggtc ctctggcgac gtcccctgca gaccaccaag tactgcggcc 481 tcgagctggc cgccttgctg cgcacgtgga gcaccagact gctgcagcag cgactcctgc 541 tggccgccct gatagtatta ggcatcgtat ttagcgtaat ttacaaaata gacggccccc 601 accagttggc cattgagttt gtgcgccgga acacctggtt cttcgtctac tggctcggcc 661 tgggcgtcct gtcgtcggtg ggcctgggca ccgggctgca caccttcctg ctctacttgg 721 gcccgcacat agccagcgtc acgctggccg cctacgagtg caactccctg cgcttcccgc 781 agccaccgta tccagatgac atcatctgtc ccgaggagcc gtacgacaag cgggtgccga 841 acatctggtc catcatgtcc aaggtgcgca tggaggcctt cctctggggc gccggcacag 901 cgctgggcga gctgccgcct tacttcatgg ccaaggcggc gaggttgtcg ggctacgatc 961 ccgaggacgc cgaggagctg gccgagttcg aggctctcaa cgcgaagcgc caccaaaaga 1021 acctcagtct catggacaag ggcaagctct tcatggagcg cgtcgtggag cgcgtcggat 1081 tcttcggcat cctggcctgt gcaagcattc ccaatcccct gttcgatctg gccggaataa 1141 cctgcggcca cttcctggtg ccattctgga cgttcttcgg ggccacgctg atcggcaagg 1201 cggtgatcaa gatgcacatc cagaagatct tcgtgatcat cgcctttaat gagacgctga 1261 tcgagcgggc cgtcgatctg ttggcctcgc tgccgctgct cggccacaag ctgcaggagc 1321 cgttcaagtc cttcctgaag aaccagaagc agcgtctgca tcgccagcag cgtggatccg 1381 gtggctcggc atccggagcg ggcgattcgg gcaatctgct gtccaggatc ttcgagacgt 1441 tcgtcatcgg aatggtgtgc tacttcgtgg tgtccatcgt taactccctg gcccagagct 1501 accacaagcg gctgcacaaa aagccggcga cgggggctgc gaccacgccc actcgcctgg 1561 cggcgggggc ggcgccgagc aagaaggcgg gaaagcagaa agctttacgg gactagagaa 1621 tcggtggaag tgtttttctg ttgatcgttg ccccccaaaa acccaaaatc atacccctct 1681 ttcgtttaaa ttattttgtt tattgcggcc ttcgctctta gtcaaattat aaactgtatg 1741 tgagtgtgac cgcgagagga ggagacggcc ggaaagccag aggaatttac cttgtagact 1801 agattaggaa aaacagaaga gtaacgcagc agatgcagta gcagcagcca caacaatagc 1861 cagagcagaa tatattttag taatgtacaa gaagaaaacc ctagcaattt tccgcgcgag 1921 tatcgtttcg atgtagcgaa agtgagaggg acgccgctag tcgctagtcg cgcctaatga 1981 aaagcaaatt gtgcaaaagt tgtgcaaaag acaaacaagc cagagcaaac agagagcccg 2041 aaataaaaat aaaatttagc caggagcgag tggaaagtat aggaaagatt taaaaagtgc 2101 tgaaaaataa atgaaatatg gatatacaaa ttaaagccgg acgtatgcct caatttaggt 2161 gggatttcag ttgggcgaaa atgattactc ccagcataag cctggcttaa ttaaagatta 2221 actgctgaaa aataataaac gatatatgga tacagaaaca aaagcctgca aatgtatgta 2281 cgtatcagtt tacaaggaac tgaagtggtt tagctggaaa ggcagtcgat taacacgagg 2341 atgagtaagc tgtcctcgcg atttccggct aaacccaata attaatacaa agaaaacatt 2401 aaactgaata tagcgtggga ggaaacagat gaaataacta agtgcaaatt aataaataaa 2461 taatggaaat acaaa