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LOCUS XM_017146857 2515 bp mRNA linear INV 09-DEC-2024 (Tango5), transcript variant X1, mRNA. ACCESSION XM_017146857 VERSION XM_017146857.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146857.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2515 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2515 /gene="Tango5" /note="Transport and Golgi organization 5; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108060916" CDS 181..1656 /gene="Tango5" /codon_start=1 /product="vacuole membrane protein 1 isoform X1" /protein_id="XP_017002346.2" /db_xref="GeneID:108060916" /translation="MSQHSKKDGSSSGSGNGSGSHAGNNKSHKRQAANGSLKAQSTSH SHSQTPSKSPSGSSNSNSSSSSRSLSGSSMQAPPPTKKNQKDKQRERERAERSQLVLW RRPLQTTKYCGLELAALLRTWSTRLLQQRLLLAALIVLGIVFSVIYKIDGPHQLAIEF VRRNTWFFVYWLGLGVLSSVGLGTGLHTFLLYLGPHIASVTLAAYECNSLRFPQPPYP DDIICPEEPYDKRVPNIWSIMSKVRMEAFLWGAGTALGELPPYFMAKAARLSGYDPED AEELAEFEALNAKRHQKNLSLMDKGKLFMERVVERVGFFGILACASIPNPLFDLAGIT CGHFLVPFWTFFGATLIGKAVIKMHIQKIFVIIAFNETLIERAVDLLASLPLLGHKLQ EPFKSFLKNQKQRLHRQQRGSGGSASGAGDSGNLLSRIFETFVIGMVCYFVVSIVNSL AQSYHKRLHKKPATGAATTPTRLAAGAAPSKKAGKQKALRD" misc_feature <1096..1245 /gene="Tango5" /note="SNARE associated Golgi protein; Region: SNARE_assoc; cl00429" /db_xref="CDD:469768" polyA_site 2515 /gene="Tango5" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gacccaaatg taattcaatg aattaaatgt gaaacatcgt gccaaagtgc agacagtcaa 61 agaagcaggt aaatccagtg cacctggtca gctgctcgag agcccgaaag ccaaaaagcc 121 ggataaaagc ggactagtta caaaacagcc cggagagccg cttgcaagcc aaccgcttaa 181 atgtcacaac actcgaaaaa ggacggcagc agtagcggaa gcggtaacgg cagcggtagc 241 catgccggca acaacaagag ccacaagcgg caggcggcca acggcagtct gaaggcacag 301 tcaacctccc actcccacag ccaaacgccc tcgaaatcgc ccagcggcag tagtaatagc 361 aacagtagca gcagcagcag aagcctcagc gggagcagca tgcaggctcc tcctccgacg 421 aagaagaacc aaaaagacaa gcagcgcgaa agggagcgcg cggaacgcag ccagctggtc 481 ctctggcgac gtcccctgca gaccaccaag tactgcggcc tcgagctggc cgccttgctg 541 cgcacgtgga gcaccagact gctgcagcag cgactcctgc tggccgccct gatagtatta 601 ggcatcgtat ttagcgtaat ttacaaaata gacggccccc accagttggc cattgagttt 661 gtgcgccgga acacctggtt cttcgtctac tggctcggcc tgggcgtcct gtcgtcggtg 721 ggcctgggca ccgggctgca caccttcctg ctctacttgg gcccgcacat agccagcgtc 781 acgctggccg cctacgagtg caactccctg cgcttcccgc agccaccgta tccagatgac 841 atcatctgtc ccgaggagcc gtacgacaag cgggtgccga acatctggtc catcatgtcc 901 aaggtgcgca tggaggcctt cctctggggc gccggcacag cgctgggcga gctgccgcct 961 tacttcatgg ccaaggcggc gaggttgtcg ggctacgatc ccgaggacgc cgaggagctg 1021 gccgagttcg aggctctcaa cgcgaagcgc caccaaaaga acctcagtct catggacaag 1081 ggcaagctct tcatggagcg cgtcgtggag cgcgtcggat tcttcggcat cctggcctgt 1141 gcaagcattc ccaatcccct gttcgatctg gccggaataa cctgcggcca cttcctggtg 1201 ccattctgga cgttcttcgg ggccacgctg atcggcaagg cggtgatcaa gatgcacatc 1261 cagaagatct tcgtgatcat cgcctttaat gagacgctga tcgagcgggc cgtcgatctg 1321 ttggcctcgc tgccgctgct cggccacaag ctgcaggagc cgttcaagtc cttcctgaag 1381 aaccagaagc agcgtctgca tcgccagcag cgtggatccg gtggctcggc atccggagcg 1441 ggcgattcgg gcaatctgct gtccaggatc ttcgagacgt tcgtcatcgg aatggtgtgc 1501 tacttcgtgg tgtccatcgt taactccctg gcccagagct accacaagcg gctgcacaaa 1561 aagccggcga cgggggctgc gaccacgccc actcgcctgg cggcgggggc ggcgccgagc 1621 aagaaggcgg gaaagcagaa agctttacgg gactagagaa tcggtggaag tgtttttctg 1681 ttgatcgttg ccccccaaaa acccaaaatc atacccctct ttcgtttaaa ttattttgtt 1741 tattgcggcc ttcgctctta gtcaaattat aaactgtatg tgagtgtgac cgcgagagga 1801 ggagacggcc ggaaagccag aggaatttac cttgtagact agattaggaa aaacagaaga 1861 gtaacgcagc agatgcagta gcagcagcca caacaatagc cagagcagaa tatattttag 1921 taatgtacaa gaagaaaacc ctagcaattt tccgcgcgag tatcgtttcg atgtagcgaa 1981 agtgagaggg acgccgctag tcgctagtcg cgcctaatga aaagcaaatt gtgcaaaagt 2041 tgtgcaaaag acaaacaagc cagagcaaac agagagcccg aaataaaaat aaaatttagc 2101 caggagcgag tggaaagtat aggaaagatt taaaaagtgc tgaaaaataa atgaaatatg 2161 gatatacaaa ttaaagccgg acgtatgcct caatttaggt gggatttcag ttgggcgaaa 2221 atgattactc ccagcataag cctggcttaa ttaaagatta actgctgaaa aataataaac 2281 gatatatgga tacagaaaca aaagcctgca aatgtatgta cgtatcagtt tacaaggaac 2341 tgaagtggtt tagctggaaa ggcagtcgat taacacgagg atgagtaagc tgtcctcgcg 2401 atttccggct aaacccaata attaatacaa agaaaacatt aaactgaata tagcgtggga 2461 ggaaacagat gaaataacta agtgcaaatt aataaataaa taatggaaat acaaa