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LOCUS XM_017146838 2268 bp mRNA linear INV 09-DEC-2024 protein 58 (LOC108060904), mRNA. ACCESSION XM_017146838 VERSION XM_017146838.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146838.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2268 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2268 /gene="LOC108060904" /note="leucine-rich repeat-containing protein 58; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060904" CDS 312..1430 /gene="LOC108060904" /codon_start=1 /product="leucine-rich repeat-containing protein 58" /protein_id="XP_017002327.1" /db_xref="GeneID:108060904" /translation="MEVYTSDSSDTDSREQKTLDFGRMSLDLVTLEDHLASPQKALLR SSGDIETMLLNHNQLVGLPRVLLQFANLKILDLSSNAITSLPDAVCQLPLVTLIAKNN LLTNASLPKSLLAKMANGGGSTSNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGN KISGISKDIWKMQSLHVLSLGGNQISEVPEAVGSLNQLQALVLCDNLIEILPTSIARL KNLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLELAGRM VKASGQRPGPYDIPRTLAEYLQSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVPLL QYLCSSKCIEPEQPAARGSTVPAANASSGFMMRKVLLG" misc_feature <507..>1073 /gene="LOC108060904" /note="Leucine-rich repeat (LRR) protein [Transcription]; Region: LRR; COG4886" /db_xref="CDD:443914" misc_feature 525..587 /gene="LOC108060904" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 591..668 /gene="LOC108060904" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 696..764 /gene="LOC108060904" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 765..833 /gene="LOC108060904" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 834..902 /gene="LOC108060904" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 903..971 /gene="LOC108060904" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" misc_feature 972..1040 /gene="LOC108060904" /note="leucine-rich repeat [structural motif]; Region: leucine-rich repeat" /db_xref="CDD:275380" polyA_site 2268 /gene="LOC108060904" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaagtcggcg atctgaaaag cggccgtcgc agaggcaaaa gcaaaccact tggcattcgc 61 gctgggcgag ctgaacagtg cgagcgtcaa gtgtcgcgac ggttttttcc acatattccg 121 ctgacatcga acaacatcaa caacagcacc atccatccat tgacatctgt ttttttgttt 181 tctgttttcg ttcgcgttgc gttgcgttat ttttttgtgt gtgcgagagc gttcgaacga 241 tcgatcgatc gaccaaccga tcatcatcag tggcaaacaa agcgatcgaa tccagcagga 301 cagctattgc catggaggtg tacacgtccg atagctcgga cacggactcg cgggagcaga 361 agaccctgga ctttggccgc atgagcctcg atctcgtcac actggaggac catctggcct 421 cgccgcagaa ggctctgctc cggtccagcg gcgacatcga gaccatgctg ctcaaccaca 481 accaactggt cggcctgccc cgcgtcctgc tgcagttcgc caatctgaag atcctggatc 541 tcagctccaa tgcgatcacc tcgctgccgg acgccgtctg ccaactgccg ctcgtgacgc 601 tgatcgccaa gaacaacctg ctgaccaacg cctcgctgcc caagtcgctg ctggccaaga 661 tggccaacgg aggtggctcc acttccaact ccacgctcaa ggagctcaat ctgagcggca 721 accagctgac ccacttcccc gaacaggtca ccgagctgcg ccacctcaag tatctctatc 781 tgggcggcaa caagatctcc ggcatttcga aggatatctg gaagatgcaa agcttgcatg 841 tattgtctct gggtggcaat cagatcagcg aagtgcccga ggcagtgggc tcccttaacc 901 agctgcaggc cctcgtcctc tgcgacaacc tgatcgagat cctgccgacg agcatcgccc 961 ggctgaagaa cctgaagtcg ctgctgctcc acaagaaccg cctgcgccac ctgcccaagg 1021 acattgtggc cctgaagaac ctgacggagc tgagtctgcg cgacaatccg ctggtggtgc 1081 gcttcgtgca ggacatggcc ttgaagccgc ccaccctgtt ggaactggcc gggcggatgg 1141 taaaggccag cggccagcga ccaggaccct acgacattcc caggaccctg gccgagtacc 1201 tgcagagcgc caactgctgc gtgaatccca actgcaaggg cgtcttcttc gacaatcgcg 1261 tggagcacat caagttcgtg gacttctgcg ggaagtaccg ggtgccgttg ctgcagtacc 1321 tctgctcctc caagtgcatc gagccggagc agccggcggc gcggggctcc accgtgccgg 1381 ctgccaatgc cagcagcggc ttcatgatgc gcaaggtgct gctgggctag ccgcccagcc 1441 tcctgggccc atatccttca actatatcaa ccgggagcgc gtgcggagcg tcgaccgatc 1501 cggtatcgga tttggagcgg acacagagac acgaaatcga tatcggatta ggaatggcaa 1561 gcggaaacgg aaacggagag gaaaagatca acggaaatgg aaatggagat ggtggcggat 1621 ccacgcgctc cgaggagtca gacagccacc gcctgccgct cgccgggatt ccttttcctc 1681 ttcctcacac gttatcaaat ccaatttgaa ctagcttgct aagtgattac gacctgtttg 1741 tttgctcgcc ttgcgtgcca atttctctgt ttctgtttgc ttgtttgttt gcctgttgtt 1801 atccacactt acacaatcta taccaaagaa actcggctgg ctttcactgg gcgacaaaag 1861 gattcgagtg gcttagtagc ttagtggcta atggagcatt tggcgataat ataaacgacc 1921 ttatcgggcc ccattaattg agttggcaac gggtaactta actaccatta actactctct 1981 ttcttagaat tttacaaagg gcgtttctta tcaatagtgc taataaatgg atcagttttg 2041 ctcggttatc ttagagtttg tagacaacaa tgttccatcc ttcctatggc atataaaaca 2101 tctaatttct gataagattt caatttaaaa tcaaaaaatc tacagtacgt cctaaaagat 2161 cccttaaaga tattctattc taacaatttc tttttaatcc ttaaatgcct ataatttcct 2221 aaaataaaaa ttggactcaa cctttggcta catgcaaagt gatcatga