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LOCUS XM_017146821 4649 bp mRNA linear INV 09-DEC-2024 (LOC108060895), transcript variant X1, mRNA. ACCESSION XM_017146821 VERSION XM_017146821.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146821.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4649 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4649 /gene="LOC108060895" /note="RNA-binding protein 33; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108060895" CDS 278..3820 /gene="LOC108060895" /codon_start=1 /product="RNA-binding protein 33 isoform X1" /protein_id="XP_017002310.3" /db_xref="GeneID:108060895" /translation="MSDINDDLLNYELGDDIDDQALLGADEDELLLSDEELEKDVTSE VKQQMRAEAEEWAQEQIRQHERKHKEQLQAGAAVAASVTPTAAAAQGAQGGAAPQPES TSVPVPAPVHPPAPPPATAAVNPPSGAVEKPKEEPANEEQRVALTDPPAQQAKEQAPA EREPHPNNGNGNGNEEATENAGSQSEGEQGLGLSSSLLASSQESLPSASSASVISELP DPREDEEEREERTNYKTASERSDNSMRQQQEHAHMSPYQHQQRRHHGGHGDKSRGGGR FMQQQQNQMGKPPRGLGTRHHLLRNPSPMFGVQQQQQQRMGMAGMQPPPQQQRYGMPG NAAPPPAACLLPLTIPVPIPVSPLSLSMPPAHPAHPQQTTLNNPTFIPIPGQYPPSQP PNQSSQQQAPTNNTQPASPLHAPPTHSHMMHHSHNPNGGVPPHLLPHPHEQVRVGLLQ PPPLNAYAPNPGGYRNGALLGPGPGPGPNPHQQQQQPSGMRPPLYRNAPPAYGYDQGH PPQHPPQFMRPHNGWRPQGDNTRMQRPPLQTLPLHMMPGAPPNFANGMGMRGPPPPQQ QQQQQQQSQQPPPQQQQPGPQHPGNPGQQQQPNGPPPPQQQQGGSSSVPRVSKVLINP NFKGGVEAATNKFIKETHFMPAINSDAELQRQQDEFINKNRQYFEKRRMERSPPSAGS GAVASGQAGERRRSRSRSRSRGRSYSPVKRMERERERDRERERERERDRDRERDRERY GANRAAGNRGFRRAASRDRDENRGGASAASGQGAGGVPSSGAAPPKRRRSGSGGPGGT ARNPFSGEPRGRTSETGSRSMPSDEDEETRNYRLEIEKQKQLREKIMRDKELKRRRAA EEKLHEEKRAEQHNSPARDDQEAVSAGQGSAASTAAAPKHRPAQAAGERKVISLKRRD DQDAGNVRNRQAPSQSQSQSQSNAQPTQQQPAARKQLTAAKIAPEAKRSITDHLAPSS KQQQHHHQQQQQQVSAAVPARALGGSASGGTPPKPRDMLRLGTPSDDEVELDYDDDDL LLDEEDRLLATPSPPPQKASSKRSATPELLVVKRNHKVMRGGGGSSTSAPSFSSSQRR VVLKPTSNGSSSSGGGDQQSSHGGRRGERRQREENAMQRKGNAGGGGSSGSGGGIFDR LEKRQASSGGSSSGGGSGHKQRSKAPARIVLKHD" polyA_site 4649 /gene="LOC108060895" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caataccgat tgcatccctc taaaaaattg acaccaaact gcgtgtgaaa aagatccaaa 61 gttttcgcaa acctatcggg tgtctattta ttgacagatt gacagctaaa aacgcgcgcg 121 ctacgttttc gagtgcgtta caacaccgcg aatcgaacca aaatgttgta aagagccgcg 181 cagccagtgg acattcgctg ttctacttct ctaaataaca cacacacacg cacacacgcg 241 cgcgccgccg agtgtcaaca gctgccctgg cgaaaaaatg tcggacatta acgatgacct 301 gctcaactac gagctgggcg acgacatcga tgaccaggct ctgctcggcg ccgacgagga 361 tgagttgcta ctctcggacg aagagctcga aaaggatgtc accagcgagg tgaagcagca 421 gatgcgcgcc gaggccgagg agtgggccca ggagcagatt cgccagcacg agcgcaagca 481 caaggagcaa ctgcaggcag gagcggctgt agcggcatct gttactccca cagcggctgc 541 agctcaggga gctcagggag gagcagcccc gcaacccgag tccacctcag tcccagttcc 601 tgcgccagtt catccgcctg ctcctccacc agccaccgcg gcagtcaatc cacccagcgg 661 cgcagtggag aagcccaaag aagagccagc gaatgaggag cagcgggtgg cactcacaga 721 tcctccagcc cagcaggcca aggagcaggc accagccgaa agggaaccac atcccaacaa 781 tggaaatggc aatggcaacg aggaggccac cgagaatgcg ggcagccaga gcgagggaga 841 gcagggattg ggcctctcct cctccctgct ggcctcctcg caggagagcc tgcccagcgc 901 cagctccgcc tcggtgatct ccgagctgcc cgatccgcgc gaggacgagg aggagcgcga 961 ggagcgcacc aactacaaga cggccagcga aaggagcgac aacagcatga ggcagcagca 1021 ggagcacgcg cacatgtcgc cctatcagca ccagcagagg cggcaccatg gaggccatgg 1081 agacaaatct cgcggaggag gacgctttat gcagcagcag cagaaccaaa tgggcaagcc 1141 gccgcgagga ttgggaactc gccaccacct gctgcgcaat ccgtcgccca tgttcggcgt 1201 tcagcagcag cagcagcagc gcatgggcat ggccggaatg cagccgccgc cgcagcagca 1261 gcgatacggc atgccgggta atgctgctcc tccaccagcc gcctgcctcc tcccactaac 1321 cattcccgtt cccattcccg tttccccgct cagcctttca atgccaccag ctcatccagc 1381 tcatccacag cagacaacac tgaacaatcc aacattcatt ccaattccag gccagtaccc 1441 gcccagtcag ccacccaacc agtcatcaca acaacaagca ccgaccaaca acacacaacc 1501 cgcctctccc ctccacgctc ctcccacgca ttcgcacatg atgcaccaca gtcacaatcc 1561 gaatggaggc gtgccgccgc atctgctgcc ccatccgcac gagcaggtgc gcgtgggtct 1621 gctgcagcca ccgccgctga atgcgtacgc tcccaatccc ggtggctatc ggaatggagc 1681 tctattgggt ccaggaccgg gaccgggacc taatccccac cagcagcagc agcagccatc 1741 tggcatgcgt ccgccactct accgcaatgc accgcccgct tatggctacg atcagggcca 1801 tccgccgcag catccgccgc agtttatgcg gccgcacaat ggctggcggc cgcagggcga 1861 taatacgcgc atgcagcggc caccgcttca gacgctgccg ctccacatga tgcccggtgc 1921 cccgccaaac tttgccaacg gcatgggaat gcgaggtccg ccgccgccgc agcagcagca 1981 gcagcagcag caacagtcgc aacagccgcc gccgcagcag cagcagccag gaccgcagca 2041 tcccggtaat cccggccagc aacagcagcc aaatggaccg ccgccgccgc aacagcagca 2101 gggtggctcc tcttcggtgc cgcgggtcag caaggtgctc atcaatccga atttcaaggg 2161 cggcgtcgag gcggccacca acaagttcat caaggagacc cacttcatgc ccgccatcaa 2221 cagcgatgcc gagttgcagc gccagcagga tgagttcatc aacaagaaca ggcagtactt 2281 tgagaagcgg cgcatggagc gttcgccacc gtcggcgggt tcgggagccg ttgcctctgg 2341 tcaggcaggc gagcggaggc gcagccgcag tcgcagtcgc tcccggggac gcagttactc 2401 gcccgtgaag cgcatggaga gggaacgcga gagggatcgg gagcgagaga gggaacggga 2461 gagagatcgt gacagggagc gagatcgtga acgatacggg gccaatcggg cggcaggaaa 2521 tcgaggattc cgacgagcag ccagccggga tcgagacgag aatcgtggtg gtgcgagtgc 2581 cgcgagtggc caaggagcgg ggggagtgcc atccagtgga gcagcgccac ccaagcgacg 2641 gagaagtggc tccggcggac caggcggcac cgcccgcaat cccttctccg gggagccacg 2701 cggccgaacc tcggaaacgg gaagccgcag tatgcccagc gacgaggacg aggagacgcg 2761 caactaccgc ctggagatcg agaagcagaa gcaactgcgc gagaagatca tgcgtgacaa 2821 ggagttgaag cgtcggcgtg ccgccgagga gaaactacac gaggagaaac gcgccgaaca 2881 gcacaattcg ccagcacgcg acgaccagga ggcggtgtcg gcgggccaag gatctgcggc 2941 gtctacagcg gcagcgccaa agcatcggcc tgcccaggca gccggcgagc ggaaggttat 3001 ctcgttgaag cgtcgcgacg accaggatgc gggcaacgtt cgcaacaggc aggcaccttc 3061 gcagtcgcaa tcgcagtcgc agtccaatgc tcagcctacc cagcagcagc cggcggcgcg 3121 caagcaactg acggcggcaa agatagcgcc agaggccaag cgcagtataa ccgatcacct 3181 ggctccctcc tccaagcagc agcagcatca tcatcagcag cagcagcagc aggtgtctgc 3241 agctgtgccg gcgagagcgt tgggaggatc tgcaagtggc ggcactccgc cgaaaccgcg 3301 cgacatgctg cgcctgggca cgcccagcga cgatgaggtg gagctggact acgatgacga 3361 tgacctgctg ctggacgagg aggatcgttt gttggccacc ccttcgccgc cgccgcagaa 3421 ggcgagcagc aagagatcgg ccacgccgga gctgctggtg gtcaagcgga accacaaggt 3481 gatgcgaggc ggcggcggca gctcaacttc ggcgcccagc tttagctcca gccagcggcg 3541 ggtggtcctg aagcccacca gcaatggcag cagcagcagc ggcggtggag atcagcagtc 3601 atcgcatggc ggcaggagag gagagaggag gcagcgggag gagaacgcaa tgcagcggaa 3661 gggaaacgca ggaggaggcg gaagctcggg atctggagga ggaattttcg atcggctgga 3721 gaagcggcag gcctcctcgg gaggaagcag cagcggcggc gggagcggcc acaagcagcg 3781 ctccaaggcg cccgcacgca tcgtactcaa gcacgattga taaggatact tagatttaag 3841 cttaaagttt tttatatcga ttatctcgac tgtggataag agattagcga cgttgaggcg 3901 gaggcttagg cttaggagga taagaggaac tttagcttta agttataaag ttgcaacttg 3961 ttgatctgta gacttgtata cccaacgtct atataaagag cgtatgtatt tggtgagtat 4021 gagtaagggt gtctgcaccg tactcgccat acggtacaca tatatatata tatatattca 4081 tttagcccta agtgtacaaa tcttatcaat gactaaaacg tgcttcgttt tcttaaccgc 4141 aatttgtatt taaatttaga actaagtggg atgcttaaag cttgacctgg acaacaaaac 4201 aattaccaca actgtagcga acacaactgg aactcaaaaa ttcagttatg tgtgcttgca 4261 tatagcctat gtaatccatt gaatatatat ttacacaatt atatatatta attataaata 4321 cttcaaatta gtcttaagtt taacgagctg agcgtcttgc ttttttacga tgacggttct 4381 aaaagatttt attgaaagta aagaggagaa aatccaaaca ttgacaagcg caaatgctcc 4441 cgaggaattt aacttgtatt taaattatga ccctgacctg gttatgtttt tttttttaat 4501 tattttttac attgtgtccc gttgtttgta aatgaaatgt attgtctgtc tcattgtgtt 4561 cttctctgta actactataa actatttaca aaactatgtt tgcttgtgaa ctagtttaac 4621 caataaactt gaaatattgt agcatatta