PREDICTED: Drosophila takahashii ceramide synthase (LOC108060890),

LOCUS       XM_017146814            1874 bp    mRNA    linear   INV 09-DEC-2024
            mRNA.
ACCESSION   XM_017146814
VERSION     XM_017146814.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017146814.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1874
                     /gene="LOC108060890"
                     /note="ceramide synthase; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108060890"
     CDS             281..1540
                     /gene="LOC108060890"
                     /codon_start=1
                     /product="ceramide synthase"
                     /protein_id="XP_017002303.2"
                     /db_xref="GeneID:108060890"
                     /translation="MQQRRQPANGGGGGGTAGQQEPLNEQEDPKQAGIKTPQRRGCYF
                     SLAFSIGSMGLACGSLWQIPNSSDRISLQRGLVLTSLGFIYFVSLTDFCNKYLLETKH
                     GQRFRRKYRLMMSDVLEITNKIVSAIQASFSFLVGLIVCKSTCTKSFVYASHFLMEAY
                     GWFGTAYFMYDIWSMYKVHTQKIADKLHLLRITKGQNQNTELVSNGHPANGKVNGQSS
                     GGNNNGSTPGTPHEICDYDGACVQIPKDGRWDFLKYVLTHPVMMIHHVFIGTFGLLVV
                     TYIRGGGHCIYSYMFMMEFSTPFVSLRSILSTMRLKDSRVYIANGLLMLATFFVCRVC
                     MWPYVMWRYSLAIEAASMWAAMCGLPRGCLVSIAILFLPQLYWFYLMVLGALKVFLPQ
                     KRRPPNAVLPGTSAATPTPTALANGKN"
     misc_feature    623..1447
                     /gene="LOC108060890"
                     /note="TRAM, LAG1 and CLN8 homology domains; Region: TLC;
                     smart00724"
                     /db_xref="CDD:214789"
     polyA_site      1874
                     /gene="LOC108060890"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gcgcagtgcg accgtgacaa ccaatcccgc ggctcgctcg cgtataccag aaatactttt
       61 ttttggcttt ttgcatgttg cactcgagga atccgctcca gctccagctc ctcccgttcg
      121 cccagccgcc atgtcccaga cgcagtgccg ccagtaagca gccgccgtcg agagaagtcc
      181 gccaggagca gcagcagcag aagaagcagc agtagaagga gggtcaggaa atccgcaaca
      241 ggttgcgtcg cccaaaagaa gtgtttaccc tgcatctagg atgcagcagc gccgccagcc
      301 ggcgaatgga ggaggaggag ggggaaccgc cggccagcag gagccgctaa atgagcagga
      361 ggatccaaag caggccggga ttaagacgcc gcagcgacgc ggctgctact tctcgctggc
      421 cttctccatc ggctcgatgg gattggcctg cggcagcctg tggcagatcc ccaacagcag
      481 cgaccgcatc tcgctgcagc gcggcctggt gctcacatcg ctgggattca tctacttcgt
      541 ctcgctgacc gatttctgca acaaatatct gctggagacg aagcatggcc agagattccg
      601 ccgcaagtac cgcctgatga tgtccgatgt actggagatt accaacaaaa tcgtatcggc
      661 catccaggcg tcgttctcct tcctcgtggg cctcatcgtc tgcaagtcga cgtgcaccaa
      721 gtccttcgtg tacgcgtcgc acttcctgat ggaggcctac ggctggttcg gcaccgccta
      781 ctttatgtac gacatctggt cgatgtacaa ggtgcacacc cagaagattg ccgacaagct
      841 gcacctgctg cgcattacca agggtcaaaa tcagaacact gagctggtga gcaatggtca
      901 tccggccaac ggaaaggtca atggtcagtc atctgggggc aacaacaacg gcagcactcc
      961 gggcactcca cacgaaatct gcgactacga tggcgcctgc gtgcagattc ccaaggacgg
     1021 cagatgggac ttcctcaagt acgtcctcac gcacccggtc atgatgattc accacgtctt
     1081 tatcggtacc tttggtctgc tggtggtgac gtacatccgc ggcggaggcc actgcatata
     1141 cagctacatg ttcatgatgg agttctccac gccgttcgtc tcgctgcgca gcattttgag
     1201 caccatgcgc ctgaaggact cgcgcgtcta catcgccaac ggactcctca tgctggccac
     1261 cttcttcgtg tgccgcgtct gcatgtggcc ctatgtcatg tggcgctaca gcctggccat
     1321 cgaggcggcc tccatgtggg cggccatgtg cgggctgccg cgcggttgcc tcgtcagcat
     1381 cgccattctg ttcttgccac agctctattg gttctatctg atggttttgg gggctctcaa
     1441 ggttttcctg ccgcagaagc gacgaccgcc caacgccgtc cttccaggca cgtctgcggc
     1501 cacgcccact cccaccgccc tcgcaaatgg caaaaactag tgcaaattgt aacctacttg
     1561 tttgtatcca tgtatttatt ttgaggcaca gttccagccg cttccatttt gcggagatct
     1621 tgctattgtt tatacatttt taacaattaa ttatacaaca acgactcaac gggacggacg
     1681 gaaaatgtac acgaaaaaag aatcgaggga ggattacgag aaaaatacaa aataataaga
     1741 cccgggacag atctttagtt gtaaaaagac attatttact aaaaacatga aaagaaaacc
     1801 aacaaaaaaa aaacgaagaa caaaaacaaa actaaaacca aatgcagata aagcgaataa
     1861 actaactaca tata