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LOCUS XM_017146775 2314 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017146775 VERSION XM_017146775.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146775.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2314 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2314 /gene="Hsp60A" /note="Heat shock protein 60A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins" /db_xref="GeneID:108060867" CDS 161..1882 /gene="Hsp60A" /codon_start=1 /product="heat shock protein 60A" /protein_id="XP_017002264.1" /db_xref="GeneID:108060867" /translation="MFRLPVSLARTSISRQLAMRGYAKDVRFGPEVRALMLQGVDVLA DAVAVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIELKDKFQNIGAKLVQDVANNTN EEAGDGTTTATVLARAIAKEGFEKISKGANPVEIRRGVMLAVETVKDNLKTMSRPVKT PEEIAQVATISANGDQAIGNLISEAMKKVGRDGVITVKDGKTLNDELEVIEGMKFDRG YISPYFINSSKGAKVEFQDALLLLSEKKISSVQSIIPALELANAQRKPLVIIAEDIDG EALSTLVVNRLKIGLQVAAVKAPGFGDNRKSTLTDMAIASGGIVFGDDADLVKLEDVK VSDLGQVGEVVITKDDTLLLKGKGKKEDVLRRANQIKEQIEDTTSEYEKEKLQERLAR LASGVALLRVGGSSEVEVNEKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLDAV KTNNEDQNLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKVETQAGDYGYDALKGEYGN LIEKGIIDPTKVVRTAITDASGVASLLTTAEAVVTEIPKEDGAPGMPGMGGMGGMGGM GGMGGMM" misc_feature 230..1792 /gene="Hsp60A" /note="GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found...; Region: GroEL; cd03344" /db_xref="CDD:239460" misc_feature order(230..232,242..244,293..295,326..337,341..343, 356..361,365..367,395..397,401..403,425..427,437..439, 446..448,809..811,905..907,989..991,1373..1375,1379..1381, 1598..1600,1760..1762,1769..1789) /gene="Hsp60A" /note="ring oligomerisation interface [polypeptide binding]; other site" /db_xref="CDD:239460" misc_feature order(311..319,479..481,491..493,668..670,1415..1417, 1466..1468,1583..1585,1700..1702,1706..1708) /gene="Hsp60A" /note="ATP/Mg binding site [chemical binding]; other site" /db_xref="CDD:239460" misc_feature order(545..547,1523..1525,1577..1579,1604..1606, 1610..1615,1622..1624) /gene="Hsp60A" /note="stacking interactions [active]" /db_xref="CDD:239460" misc_feature order(641..643,776..778,797..799,1346..1348,1448..1453) /gene="Hsp60A" /note="hinge regions; other site" /db_xref="CDD:239460" polyA_site 2314 /gene="Hsp60A" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctggcaacac tgatttaagc cacattaagg ttaggaagtt cgcacatttc gaatttcggg 61 cgagtaaact gaagtgaagt gagcttgttg tttcacatca aatagaatcg gaactattca 121 actgtcttgt taatactgcg cagcaccagt ttaattcaca atgtttcgtt tgccagtttc 181 gcttgctcgc acctccatca gccgccagct ggccatgcgc ggctatgcga aggacgtgcg 241 attcggtccc gaggtgcgcg ccctgatgct ccagggcgtc gatgtgctgg ccgatgcggt 301 ggcggtgacc atgggcccca agggacgcaa cgtgatcatc gagcagtcgt ggggctcgcc 361 caagatcacc aaggacggcg tgacggtggc caagtccatt gagctgaagg acaagttcca 421 gaatatcggt gccaagttgg tccaggatgt ggccaataat accaatgagg aggccggtga 481 tggcaccacc acagccactg ttttggcacg cgccatcgca aaggagggct tcgagaagat 541 ctccaagggc gccaatcccg tcgagattcg acgcggcgtc atgctggccg tggagacggt 601 caaggacaac ctgaagacga tgtcgcggcc cgtgaagacg cccgaggaga tcgcccaggt 661 ggccacgatt tcggccaacg gcgaccaggc catcggcaat ctgatcagcg aggccatgaa 721 gaaggtggga cgcgatggcg tcattaccgt caaggacggc aagaccctga acgatgagct 781 ggaggtgatc gagggcatga agttcgatcg cggctacatt tcgccgtact tcatcaactc 841 gtcgaagggc gccaaggtgg agttccagga cgctttgctg ctgctctccg agaagaagat 901 ctcctcggtg cagagcatca ttcccgcttt ggagctggcc aacgcccagc gcaagccgct 961 ggtcatcatt gccgaggata tcgatggtga ggctttgagc accttggtgg tgaatcgcct 1021 caagattggc ctgcaggtgg ccgccgtcaa ggcgcctggt ttcggtgata accgcaagag 1081 caccctcacc gacatggcca tcgcctccgg gggcattgtc ttcggcgacg atgccgatct 1141 cgtcaagctg gaggacgtca aggtcagcga tctgggtcag gtgggcgagg tggtcatcac 1201 caaggacgac acgctgctgc tgaagggcaa gggcaagaag gaggatgtgc tgcgtcgcgc 1261 caaccagatc aaggagcaga tcgaggacac cacctccgag tacgagaagg agaagctgca 1321 ggagcgcctg gcccgcttgg cctcgggcgt tgccctgctc cgcgtcggcg gctccagcga 1381 ggtggaggtc aacgagaaga aggatcgcgt gcatgatgcc ctcaacgcca cccgggcggc 1441 cgtcgaagag ggaatcgttc ccggcggcgg caccgctctg ctgcgctgca tcgagaagct 1501 ggatgccgtg aagaccaaca acgaggatca gaacctcggc gtggagatcg tgcgtcgcgc 1561 cctgcgcatg ccctgcatga ccattgccaa gaacgccggc gtcgatggcg ccatggtggt 1621 ggccaaggtg gagacccagg ccggcgacta cggctacgat gcgctgaagg gcgagtacgg 1681 caacctgatc gagaagggca tcatcgatcc caccaaggtg gtgcgcaccg ccatcacgga 1741 cgcctccggc gtggcctccc tgctgaccac cgccgaggcc gtggtcaccg agatccccaa 1801 ggaggatggc gctcctggca tgcccggcat gggtggaatg ggcggcatgg gaggcatggg 1861 cggcatgggt ggcatgatgt aagacggaga agcctgcgta ctgtttaagt cacgatgagg 1921 agcgatgacg acggagcgga gaggccagcg aacgcagatt agatcagcag ttgcggcgag 1981 acccaccaat atctcttaca tcggtgcatc cagttagatt catgcctctt ttgactctta 2041 acgcccccat acacattcta atcctcgatg gaacctcgtt ttgcttcgca tttatccttt 2101 ggcaaaagca gaaagacatc aacactacac acaaaacgct ggatgtgcgc tcgccgagac 2161 gcctgcgttc gcgccaccac tcgtcgtccg cttccattgt gttctacgtt tttttaacta 2221 ttccttaact ctattttttt ttacatgtta tatatgtaaa gataccgtta gttgtaaaat 2281 atataaaata aaacagaagt taaattgagg aaaa