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LOCUS XM_017146764 5669 bp mRNA linear INV 09-DEC-2024 protein sprint (spri), transcript variant X5, mRNA. ACCESSION XM_017146764 VERSION XM_017146764.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146764.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5669 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5669 /gene="spri" /note="Src homology 2 domain-containing protein sprint; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108060859" CDS 329..4924 /gene="spri" /codon_start=1 /product="protein sprint isoform X5" /protein_id="XP_017002253.2" /db_xref="GeneID:108060859" /translation="MTSEPLPSAGATPSSLEAASVDAGGNNNNINNNHNGQQSQKSQQ QASLSAISSKLNVLAAQSNLNNNNTSSQSGSMTSASNQKQNQNQHQNFNQNQSTDSRR SSSLDPDGDVDDVVDAVHGGAFEDDMQALLPKCSRRSRDELSQSRTSLVSSSEGGILA EGETSSEDDEEEPVEAEDEDEGEEESSRDSSDNSPPCDLGLMERLLVTHPMWFLPGIQ RSGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLPQDTGPYIEHYLIQSHDNVLSLESS RFTFGSIPSLIAHYAQCCDELPVQLMLPRVLREANNRKKLSSLALLGQEFWSYASSPA LLGGPPTPTVAPSSRDQQQQQHLLDAKSPLSLTETSGLGTATFFSDALVKPPPTGAPP LPGSSSLFSPTGSGQLLGFFSQAGTPSDTTNSSLSSFTTSGGQHLQLLSPNSVDSVIL TMSPVDNPGHYLPGSMGGAAPTAICPSLIEQQQQQQQLSTFKVAPAAADQVVDQVRPQ RPKPPNTLNLKPPAPPLRWSKPHSPDQNGGGANGNFTVTTTVTFSMENGGGGGGGLAS GAAAGNGSGKFVEVTTPAANNPFNALLNGQASTFQTFAKRLSPEGECKDTLSSQGSSS NDGRWPPTASRKLLTANSPLTPLTPSGGSSSSGGKSRKSRAGKESQHYKESDILESPP LQYCASALSDKISDYEDVWSHDPSDRASLLTSFRPVLDSVGGVMNLRPDLLAETPSTP TPTQHLTPCEEETTTATPNESSSQSLLQFSGDVPARSRAGLLLPNLSGQAPPAAMSQS MSAAEDDGGDTTPTAEGQNLGGSSRSKQGSPFYAEPADALRQAGLTSAATAILRRQHR SQMLHASQRHSEPLKAGFGGSGNGAMLPSELEKLAGSLDELKPKPKVSQQQKQSQQQQ QPSKRARNLIDHWQLDSSWEFMAKQDQGSGSDYDAAAIDWQEKENSLGKKRTLTIHQI IANRLPDLNLPELVRCSTPPSQTSALQPHVQGQDKDKDKVGLGCRLSSYDNVFCQNSF GGIDSAQSDDGTIFSEPWDSSQWDSFLPHDDATINSDTIHLSKCRPALSEDDTIAEEL QSTKDGSNGSCNQDTLKANRNGGAGHHKPNNTTNGKANSRPKVATILRNPSMRDREVL CHPRNKMSIQGSGPGDSLRAYTLQLAQDPSSTFARNIENFICCTKESREAAPQVVMRN MRQFMSGMKNYLVKHGEGKFHAELETARSRLKSDEFLNLDAMLETVMHQLVVLPLREH LYGIFVDHYQRSEDIQLLAQNVRYACEREAADFGIRPTVTPPSQAALRLIANLLWRLQ EAELPLDKLELFLCVISTVFDATGCPRGQQLGADDFLPVLVYVVAKCGFVGAEIEAEF MWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMASEGESGSGSLDWRSSCLPACSSVLR VIIPDECNGSLQTRTLPVRPHTTTREVCRIIAHKARITNPQDYALFKLVDGEETLLTD AECPQDARLAAKGKHCMLAYKRIDAKIAWPTAQLAGH" misc_feature 929..1222 /gene="spri" /note="Src homology 2 (SH2) domain; Region: SH2; cl15255" /db_xref="CDD:472789" misc_feature order(983..985,1037..1039,1109..1111,1115..1117) /gene="spri" /note="phosphotyrosine binding pocket [polypeptide binding]; other site" /db_xref="CDD:198173" misc_feature order(1112..1114,1193..1195) /gene="spri" /note="hydrophobic binding pocket [polypeptide binding]; other site" /db_xref="CDD:198173" misc_feature 4262..4558 /gene="spri" /note="Vacuolar sorting protein 9 (VPS9) domain; Region: VPS9; pfam02204" /db_xref="CDD:460489" misc_feature 4628..4882 /gene="spri" /note="Ras-associating (RA) domain of Ras and Rab interactor (Rin) protein family; Region: RA_Rin; cd01776" /db_xref="CDD:340474" polyA_site 5669 /gene="spri" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgctcgacga cgacggttca gcgcggttgc tcgaaaatcg aataagaacg ccgacaatgt 61 tgtttgccat tttcacacgc gaataatttc gaattgcgaa ttttttgttt ttgcaaactg 121 tgaaaatgcc atcgaagctt cggaaaatag tgcaagaagt tgcattttaa acaatacaaa 181 agtacgaaac tctttctaca gtcaacgaac ttgtcatcgc ggaagcccag aagagtgaaa 241 gagacggaag agccggagag agagagagac agagtctctt ctcccctctg aaatttgcat 301 agagaaacac gacacagaaa gcagcaacat gacaagtgaa ccgctgccct ctgccggagc 361 cacgccctct tctttggagg cggcctctgt ggatgccggt ggcaacaaca ataacatcaa 421 caacaatcac aatggccaac agtcacagaa atctcagcag caggcgagtc tcagcgccat 481 cagcagcaaa ctgaatgtct tggccgccca atcgaatctg aacaacaata atacgagcag 541 tcagtcagga tccatgacat ctgcctcgaa tcagaaacag aatcaaaatc agcatcagaa 601 tttcaaccaa aatcagagca cagacagtcg gcggagcagc agcctggatc cggatgggga 661 tgtggatgat gtcgtggacg cggtccatgg cggcgccttc gaggatgata tgcaggccct 721 gttgcccaaa tgctcgcgtc gctcccgaga tgagcttagt cagtcgcgca catctctggt 781 gtccagctcg gagggcggca tcctggccga gggcgagacg tccagcgagg atgacgagga 841 ggagcccgtg gaggcggagg acgaggatga gggcgaggag gagagcagcc gggattccag 901 cgacaattcg ccgccctgcg atctgggact catggagcgc ctgctggtga cccatccgat 961 gtggttcctg cccggcatcc agcgctccgg ggccgttcat ctgctccagg gcaaggagga 1021 ggggaccttc atagttcgcg gttccagcca gccaaacacg atggccgttt cggtgcgact 1081 gccccaggat acgggaccct atatcgagca ctatctcatc cagtcgcacg acaatgtcct 1141 gagcctcgag agctcgcgct tcacgttcgg ctcgatacct tcgctaattg cccactacgc 1201 ccagtgttgc gatgagctgc cggtgcagct gatgttgccg cgtgtcctgc gggaggcgaa 1261 caatcgcaag aagctgagct ccttggccct gctgggtcag gagttctgga gctatgccag 1321 cagtcccgcc ttgttgggtg gtccgcccac gccaacggtg gcgccatcgt caagggatca 1381 gcagcagcag cagcatctgc tggatgccaa gtcgccgctc tcgctgaccg aaaccagtgg 1441 cctcggaacg gccaccttct tcagcgatgc cctggttaag ccaccgccca caggagcacc 1501 gcctcttcca ggaagtagtt ccctcttcag tcccaccgga agtggccagt tgctgggatt 1561 cttcagccag gcgggaactc cttcggatac gacaaactca agcctcagct ccttcaccac 1621 cagcgggggt cagcacctgc agctgctgag tccgaattcg gtggattcgg tgattctaac 1681 catgtcgccg gtggacaatc cgggtcatta tctgcccggt tcgatgggcg gagcagctcc 1741 aacggccatt tgcccatcgt taatcgagca gcagcagcag caacagcagc tgagcacttt 1801 caaggtggct ccagcggcag cggatcaagt ggtggatcaa gtgcgtccgc agcgaccgaa 1861 gccgccgaac acattgaatc tcaagccgcc ggcaccgccg ttgcgctggt ccaagccgca 1921 ctcgccggat cagaatggag gaggggccaa tggcaacttt acggtcacca ccacggttac 1981 cttttcgatg gagaatggtg gtggaggagg cggaggattg gccagtggag cggcggcggg 2041 aaatggcagt ggcaaattcg tggaggtcac cacgccggcg gccaataatc ccttcaatgc 2101 cctgctcaac gggcaggcca gcactttcca gaccttcgcc aagcgactgt cgccggaggg 2161 cgagtgcaag gatacgctgt cctcgcaggg atcctcctcg aacgatggcc gctggccacc 2221 gacggctagc cgtaagctcc tcaccgcgaa ctctcccctg actccgctga cgcccagcgg 2281 cggcagcagc agcagtggcg gcaagtcaag gaaatcgcga gcgggcaagg agtcacagca 2341 ctacaaagag tccgacatcc tcgagagccc gccgctacag tattgcgcca gtgcgctgag 2401 cgacaagatc agcgactacg aggacgtctg gtcgcacgat ccgagtgatc gggccagcct 2461 gctcaccagc ttccgccccg ttctggactc ggtgggcggg gtgatgaacc tgcgacccga 2521 tctgctggcc gagactccga gcactcccac acccacgcag cacctaacgc cctgcgagga 2581 ggaaaccacc actgccacgc ccaacgaatc ctcgagccaa tccctgctcc agttctccgg 2641 cgacgttccg gcccgctccc gggcaggtct gctcctgccg aatctctcgg gacaggcgcc 2701 gcccgcggcc atgtcgcaat cgatgtcggc ggccgaggac gatggcggcg ataccacgcc 2761 cacggccgag ggccaaaacc tcggcggcag cagtcgcagc aagcagggca gtccattcta 2821 cgccgaaccg gcggatgcac tgcgtcaggc aggcctgacc agtgcggcca ccgccattct 2881 gcggcgccag catcgcagcc aaatgctgca cgccagccaa agacactcgg aaccactgaa 2941 agcgggcttc gggggatcag gaaatggggc aatgctcccc agcgaactgg agaagctggc 3001 cggcagcctg gacgagctga agcccaagcc gaaggtctcc cagcagcaaa agcaatcgca 3061 acagcagcaa cagcccagca agcgggcacg caatctcatc gatcactggc aactggacag 3121 cagctgggag tttatggcca agcaggatca gggatcaggc agcgactacg atgcggcggc 3181 catcgattgg caggagaagg agaattcgct gggcaagaag cgtacgctga ccatacacca 3241 gatcatcgcg aacagattgc ccgatctcaa tctcccagag ctggtgagat gctcgacgcc 3301 gccttcgcaa acgagcgccc tgcagccgca tgtccaggga caggataagg ataaggataa 3361 ggtcggactg ggttgccggc tctcctcgta cgacaacgtc ttctgccaga actccttcgg 3421 tggcatcgat tcggcccagt ccgatgatgg caccattttc tccgagccct gggactcctc 3481 ccagtgggac tccttcctgc cccacgatga tgccaccatc aactcggaca ccattcatct 3541 gtccaagtgc cgacccgctc tctccgagga cgacacgatc gccgaggaac tgcaaagcac 3601 caaagacggc agcaatggca gctgcaacca ggatacattg aaggccaaca ggaatggtgg 3661 tgctggacac cacaagccca acaataccac caatggcaag gccaacagtc gacccaaggt 3721 ggccacaatt ctgcggaacc ccagcatgcg ggatcgtgaa gtcttatgtc acccccgcaa 3781 caagatgagc atccagggca gcggccccgg cgactctttg cgcgcctaca ccctccagtt 3841 ggcccaggat cccagctcca cgttcgcccg caacatcgag aacttcatct gctgcaccaa 3901 ggagtcgcgc gaggcggcgc cccaggtggt gatgcgcaat atgcgtcagt ttatgagcgg 3961 catgaagaac tatctggtga agcatggcga gggcaagttc cacgccgaac tggagactgc 4021 gaggtcgcgt ttgaagtccg atgagtttct caatctggat gccatgctgg agactgtgat 4081 gcatcagctg gtggtgctgc cgctgcggga gcatctgtac gggatattcg tggatcacta 4141 tcagcgcagc gaggacatcc agctgctggc ccagaatgta cgctatgcct gcgaacggga 4201 ggccgccgac tttggcatcc ggccaacggt tacgccgccc tcgcaagcgg cactgcggct 4261 gatcgccaac ctgctgtggc gcctccagga ggccgagctg ccgctggaca agcttgagct 4321 cttcctctgc gtcatctcga ccgtgttcga tgccaccggc tgtccgcgtg gccagcagct 4381 gggcgccgat gacttcctgc ccgtcctcgt ctatgtggtg gccaaatgcg gttttgtggg 4441 cgccgagatc gaagcggagt tcatgtgggg cctcctccag ccgacgctgc tcaacgggga 4501 gccgggctac tacctaaccg ccctctgcag cgccgtccag gtgctcaaga ccttcatggc 4561 ctccgagggg gagagcggca gcggatccct ggactggcgc tccagctgcc tgcccgcctg 4621 ctccagtgtg ctgcgcgtga tcattcccga cgagtgcaat ggatcgctgc agacccgcac 4681 tttgccggtg cgaccccaca cgaccacccg cgaggtgtgc cgcatcattg cccacaaggc 4741 gcgcatcacg aatccgcagg actacgccct cttcaagctg gtcgacggcg aggagacgct 4801 gctgacggac gccgagtgtc cgcaggatgc ccgactggcg gccaagggca agcactgcat 4861 gctggcctac aagaggatcg atgcgaagat agcctggccg actgcccagc tggcgggaca 4921 ctgattcggt cgcccagttt acacacctac gacataccgc cccgcccccc gccaaacccg 4981 ccctgccctt cttgctcact aaccaagcat atttgattaa taatttatta ttattacatt 5041 aaaatatact tagtagcctg taagtaaagc taattaatgc taattagaaa acatctaatg 5101 tgtactaaac atcagtattg agttaagtgt gttttttttt cccgaccctc gggtcgaacc 5161 cctttttttt ttgcttataa aatgtactat gcgaataata catatacaca catatatacg 5221 atatataaac ttaagcgagt agagatgcaa aatctgcaca aaggaagtgg caaggagtca 5281 tctaaacgaa tctacactct aaacatatat gcaggcacga tcgttcggat cgtgtgtgcc 5341 accaccctgg agaccaaaag cacagttcaa caatcacagc aacaatcaat cattcattca 5401 atcaagcgat ctagctatct agcgatcagt gcataccatc aaactacaca aaaggcattt 5461 aggtgtgaat gggtttcgtg tttttttaag aagctaaacc atattatatt aaagtataaa 5521 ccactacatt ttaatattta tgttcgacta aacactgcta tcaaccctcg agatatacat 5581 aaatacatac atattttttt tgtatacttt gtaaaatatg tgacacataa tccaaatagc 5641 aagcaaataa ataaccaaaa taaaacaaa