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LOCUS XM_017146762 6422 bp mRNA linear INV 09-DEC-2024 protein sprint (spri), transcript variant X2, mRNA. ACCESSION XM_017146762 VERSION XM_017146762.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146762.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6422 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6422 /gene="spri" /note="Src homology 2 domain-containing protein sprint; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108060859" CDS 329..5677 /gene="spri" /codon_start=1 /product="protein sprint isoform X2" /protein_id="XP_017002251.2" /db_xref="GeneID:108060859" /translation="MMSHETAAVPGAVVSSCADNSSKVEVIVYTTKSDKTLKQNMNAK DDTLRKRTSLIIVPQQVDVDLDTKVDQTRENVNGNRNSTASMDSCVSNTTSHSNQSSS GSSSTSSGSSSGSEDAHAAYQDLQNGNGNGNENANHLSPSPVPRCHSSSSSSSVSEST SCSSSADYSLREQLKNFANRNAIEEQILRSSAGGGGEGVPESTTTTRLLKGMSLPVGD QQSAVCDSLLSPQEAPLGRRYAEVAQFKGHPKARTSEPLPSAGATPSSLEAASVDAGG NNNNINNNHNGQQSQKSQQQASLSAISSKLNVLAAQSNLNNNNTSSQSGSMTSASNQK QNQNQHQNFNQNQSTDSRRSSSLDPDGDVDDVVDAVHGGAFEDDMQALLPKCSRRSRD ELSQSRTSLVSSSEGGILAEGETSSEDDEEEPVEAEDEDEGEEESSRDSSDNSPPCDL GLMERLLVTHPMWFLPGIQRSGAVHLLQGKEEGTFIVRGSSQPNTMAVSVRLPQDTGP YIEHYLIQSHDNVLSLESSRFTFGSIPSLIAHYAQCCDELPVQLMLPRVLREANNRKK LSSLALLGQEFWSYASSPALLGGPPTPTVAPSSRDQQQQQHLLDAKSPLSLTETSGLG TATFFSDALVKPPPTGAPPLPGSSSLFSPTGSGQLLGFFSQAGTPSDTTNSSLSSFTT SGGQHLQLLSPNSVDSVILTMSPVDNPGHYLPGSMGGAAPTAICPSLIEQQQQQQQLS TFKVAPAAADQVVDQVRPQRPKPPNTLNLKPPAPPLRWSKPHSPDQNGGGANGNFTVT TTVTFSMENGGGGGGGLASGAAAGNGSGKFVEVTTPAANNPFNALLNGQASTFQTFAK RLSPEGECKDTLSSQGSSSNDGRWPPTASRKLLTANSPLTPLTPSGGSSSSGGKSRKS RAGKESQHYKESDILESPPLQYCASALSDKISDYEDVWSHDPSDRASLLTSFRPVLDS VGGVMNLRPDLLAETPSTPTPTQHLTPCEEETTTATPNESSSQSLLQFSGDVPARSRA GLLLPNLSGQAPPAAMSQSMSAAEDDGGDTTPTAEGQNLGGSSRSKQGSPFYAEPADA LRQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAGFGGSGNGAMLPSELEKLAGSLD ELKPKPKVSQQQKQSQQQQQPSKRARNLIDHWQLDSSWEFMAKQDQGSGSDYDAAAID WQEKENSLGKKRTLTIHQIIANRLPDLNLPELVRCSTPPSQTSALQPHVQGQDKDKDK VGLGCRLSSYDNVFCQNSFGGIDSAQSDDGTIFSEPWDSSQWDSFLPHDDATINSDTI HLSKCRPALSEDDTIAEELQSTKDGSNGSCNQDTLKANRNGGAGHHKPNNTTNGKANS RPKVATILRNPSMRDREVLCHPRNKMSIQGSGPGDSLRAYTLQLAQDPSSTFARNIEN FICCTKESREAAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELETARSRLKSDEFLNL DAMLETVMHQLVVLPLREHLYGIFVDHYQRSEDIQLLAQNVRYACEREAADFGIRPTV TPPSQAALRLIANLLWRLQEAELPLDKLELFLCVISTVFDATGCPRGQQLGADDFLPV LVYVVAKCGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQVLKTFMASEGESG SGSLDWRSSCLPACSSVLRVIIPDECNGSLQTRTLPVRPHTTTREVCRIIAHKARITN PQDYALFKLVDGEETLLTDAECPQDARLAAKGKHCMLAYKRIDAKIAWPTAQLAGH" misc_feature 1682..1975 /gene="spri" /note="Src homology 2 (SH2) domain; Region: SH2; cl15255" /db_xref="CDD:472789" misc_feature order(1736..1738,1790..1792,1862..1864,1868..1870) /gene="spri" /note="phosphotyrosine binding pocket [polypeptide binding]; other site" /db_xref="CDD:198173" misc_feature order(1865..1867,1946..1948) /gene="spri" /note="hydrophobic binding pocket [polypeptide binding]; other site" /db_xref="CDD:198173" misc_feature 5015..5311 /gene="spri" /note="Vacuolar sorting protein 9 (VPS9) domain; Region: VPS9; pfam02204" /db_xref="CDD:460489" misc_feature 5381..5635 /gene="spri" /note="Ras-associating (RA) domain of Ras and Rab interactor (Rin) protein family; Region: RA_Rin; cd01776" /db_xref="CDD:340474" polyA_site 6422 /gene="spri" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgctcgacga cgacggttca gcgcggttgc tcgaaaatcg aataagaacg ccgacaatgt 61 tgtttgccat tttcacacgc gaataatttc gaattgcgaa ttttttgttt ttgcaaactg 121 tgaaaatgcc atcgaagctt cggaaaatag tgcaagaagt tgcattttaa acaatacaaa 181 agtacgaaac tctttctaca gtcaacgaac ttgtcatcgc ggaagcccag aagagtgaaa 241 gagacggaag agccggagag agagagagac agagtctctt ctcccctctg aaatttgcat 301 agagaaacac gacacagaaa gcagcaacat gatgtcgcac gaaacggcag cagttccagg 361 agcagtggtt tcctcctgtg cggacaactc gtcgaaggtg gaggtcatcg tctacaccac 421 caaatcggat aagacgctca agcagaacat gaatgccaag gatgatacgc tcaggaagcg 481 tacttccctg atcatagtgc cccagcaggt ggatgtggat ttagacacaa aggtggatca 541 aactagggag aatgtgaatg gaaatcgcaa ctcaacggcc agcatggata gttgtgtctc 601 gaataccacc agtcatagca accagtcgtc gagtggctcc tcgtccacca gcagcgggag 661 tagcagtggc tccgaggacg cccatgccgc ctaccaggat ttgcagaatg gcaatggaaa 721 tggtaatgaa aatgccaatc atctttcacc atcgcctgtg cccaggtgcc attcatccag 781 ctcctcatcc tccgtctcgg agtccacctc gtgctccagt tcggcggact attcgctgcg 841 ggagcagctc aagaactttg ccaatcgaaa tgcaatcgaa gagcagatcc taagatcctc 901 tgcaggagga ggaggagaag gtgtcccgga atccaccacc accactcgtt tgctcaaggg 961 catgagtttg cctgtcggcg atcagcagtc ggccgtctgc gattccctac tcagtccgca 1021 ggaggctcct ctgggacgac gctacgccga ggtggcacag ttcaagggtc atcccaaggc 1081 aaggacaagt gaaccgctgc cctctgccgg agccacgccc tcttctttgg aggcggcctc 1141 tgtggatgcc ggtggcaaca acaataacat caacaacaat cacaatggcc aacagtcaca 1201 gaaatctcag cagcaggcga gtctcagcgc catcagcagc aaactgaatg tcttggccgc 1261 ccaatcgaat ctgaacaaca ataatacgag cagtcagtca ggatccatga catctgcctc 1321 gaatcagaaa cagaatcaaa atcagcatca gaatttcaac caaaatcaga gcacagacag 1381 tcggcggagc agcagcctgg atccggatgg ggatgtggat gatgtcgtgg acgcggtcca 1441 tggcggcgcc ttcgaggatg atatgcaggc cctgttgccc aaatgctcgc gtcgctcccg 1501 agatgagctt agtcagtcgc gcacatctct ggtgtccagc tcggagggcg gcatcctggc 1561 cgagggcgag acgtccagcg aggatgacga ggaggagccc gtggaggcgg aggacgagga 1621 tgagggcgag gaggagagca gccgggattc cagcgacaat tcgccgccct gcgatctggg 1681 actcatggag cgcctgctgg tgacccatcc gatgtggttc ctgcccggca tccagcgctc 1741 cggggccgtt catctgctcc agggcaagga ggaggggacc ttcatagttc gcggttccag 1801 ccagccaaac acgatggccg tttcggtgcg actgccccag gatacgggac cctatatcga 1861 gcactatctc atccagtcgc acgacaatgt cctgagcctc gagagctcgc gcttcacgtt 1921 cggctcgata ccttcgctaa ttgcccacta cgcccagtgt tgcgatgagc tgccggtgca 1981 gctgatgttg ccgcgtgtcc tgcgggaggc gaacaatcgc aagaagctga gctccttggc 2041 cctgctgggt caggagttct ggagctatgc cagcagtccc gccttgttgg gtggtccgcc 2101 cacgccaacg gtggcgccat cgtcaaggga tcagcagcag cagcagcatc tgctggatgc 2161 caagtcgccg ctctcgctga ccgaaaccag tggcctcgga acggccacct tcttcagcga 2221 tgccctggtt aagccaccgc ccacaggagc accgcctctt ccaggaagta gttccctctt 2281 cagtcccacc ggaagtggcc agttgctggg attcttcagc caggcgggaa ctccttcgga 2341 tacgacaaac tcaagcctca gctccttcac caccagcggg ggtcagcacc tgcagctgct 2401 gagtccgaat tcggtggatt cggtgattct aaccatgtcg ccggtggaca atccgggtca 2461 ttatctgccc ggttcgatgg gcggagcagc tccaacggcc atttgcccat cgttaatcga 2521 gcagcagcag cagcaacagc agctgagcac tttcaaggtg gctccagcgg cagcggatca 2581 agtggtggat caagtgcgtc cgcagcgacc gaagccgccg aacacattga atctcaagcc 2641 gccggcaccg ccgttgcgct ggtccaagcc gcactcgccg gatcagaatg gaggaggggc 2701 caatggcaac tttacggtca ccaccacggt taccttttcg atggagaatg gtggtggagg 2761 aggcggagga ttggccagtg gagcggcggc gggaaatggc agtggcaaat tcgtggaggt 2821 caccacgccg gcggccaata atcccttcaa tgccctgctc aacgggcagg ccagcacttt 2881 ccagaccttc gccaagcgac tgtcgccgga gggcgagtgc aaggatacgc tgtcctcgca 2941 gggatcctcc tcgaacgatg gccgctggcc accgacggct agccgtaagc tcctcaccgc 3001 gaactctccc ctgactccgc tgacgcccag cggcggcagc agcagcagtg gcggcaagtc 3061 aaggaaatcg cgagcgggca aggagtcaca gcactacaaa gagtccgaca tcctcgagag 3121 cccgccgcta cagtattgcg ccagtgcgct gagcgacaag atcagcgact acgaggacgt 3181 ctggtcgcac gatccgagtg atcgggccag cctgctcacc agcttccgcc ccgttctgga 3241 ctcggtgggc ggggtgatga acctgcgacc cgatctgctg gccgagactc cgagcactcc 3301 cacacccacg cagcacctaa cgccctgcga ggaggaaacc accactgcca cgcccaacga 3361 atcctcgagc caatccctgc tccagttctc cggcgacgtt ccggcccgct cccgggcagg 3421 tctgctcctg ccgaatctct cgggacaggc gccgcccgcg gccatgtcgc aatcgatgtc 3481 ggcggccgag gacgatggcg gcgataccac gcccacggcc gagggccaaa acctcggcgg 3541 cagcagtcgc agcaagcagg gcagtccatt ctacgccgaa ccggcggatg cactgcgtca 3601 ggcaggcctg accagtgcgg ccaccgccat tctgcggcgc cagcatcgca gccaaatgct 3661 gcacgccagc caaagacact cggaaccact gaaagcgggc ttcgggggat caggaaatgg 3721 ggcaatgctc cccagcgaac tggagaagct ggccggcagc ctggacgagc tgaagcccaa 3781 gccgaaggtc tcccagcagc aaaagcaatc gcaacagcag caacagccca gcaagcgggc 3841 acgcaatctc atcgatcact ggcaactgga cagcagctgg gagtttatgg ccaagcagga 3901 tcagggatca ggcagcgact acgatgcggc ggccatcgat tggcaggaga aggagaattc 3961 gctgggcaag aagcgtacgc tgaccataca ccagatcatc gcgaacagat tgcccgatct 4021 caatctccca gagctggtga gatgctcgac gccgccttcg caaacgagcg ccctgcagcc 4081 gcatgtccag ggacaggata aggataagga taaggtcgga ctgggttgcc ggctctcctc 4141 gtacgacaac gtcttctgcc agaactcctt cggtggcatc gattcggccc agtccgatga 4201 tggcaccatt ttctccgagc cctgggactc ctcccagtgg gactccttcc tgccccacga 4261 tgatgccacc atcaactcgg acaccattca tctgtccaag tgccgacccg ctctctccga 4321 ggacgacacg atcgccgagg aactgcaaag caccaaagac ggcagcaatg gcagctgcaa 4381 ccaggataca ttgaaggcca acaggaatgg tggtgctgga caccacaagc ccaacaatac 4441 caccaatggc aaggccaaca gtcgacccaa ggtggccaca attctgcgga accccagcat 4501 gcgggatcgt gaagtcttat gtcacccccg caacaagatg agcatccagg gcagcggccc 4561 cggcgactct ttgcgcgcct acaccctcca gttggcccag gatcccagct ccacgttcgc 4621 ccgcaacatc gagaacttca tctgctgcac caaggagtcg cgcgaggcgg cgccccaggt 4681 ggtgatgcgc aatatgcgtc agtttatgag cggcatgaag aactatctgg tgaagcatgg 4741 cgagggcaag ttccacgccg aactggagac tgcgaggtcg cgtttgaagt ccgatgagtt 4801 tctcaatctg gatgccatgc tggagactgt gatgcatcag ctggtggtgc tgccgctgcg 4861 ggagcatctg tacgggatat tcgtggatca ctatcagcgc agcgaggaca tccagctgct 4921 ggcccagaat gtacgctatg cctgcgaacg ggaggccgcc gactttggca tccggccaac 4981 ggttacgccg ccctcgcaag cggcactgcg gctgatcgcc aacctgctgt ggcgcctcca 5041 ggaggccgag ctgccgctgg acaagcttga gctcttcctc tgcgtcatct cgaccgtgtt 5101 cgatgccacc ggctgtccgc gtggccagca gctgggcgcc gatgacttcc tgcccgtcct 5161 cgtctatgtg gtggccaaat gcggttttgt gggcgccgag atcgaagcgg agttcatgtg 5221 gggcctcctc cagccgacgc tgctcaacgg ggagccgggc tactacctaa ccgccctctg 5281 cagcgccgtc caggtgctca agaccttcat ggcctccgag ggggagagcg gcagcggatc 5341 cctggactgg cgctccagct gcctgcccgc ctgctccagt gtgctgcgcg tgatcattcc 5401 cgacgagtgc aatggatcgc tgcagacccg cactttgccg gtgcgacccc acacgaccac 5461 ccgcgaggtg tgccgcatca ttgcccacaa ggcgcgcatc acgaatccgc aggactacgc 5521 cctcttcaag ctggtcgacg gcgaggagac gctgctgacg gacgccgagt gtccgcagga 5581 tgcccgactg gcggccaagg gcaagcactg catgctggcc tacaagagga tcgatgcgaa 5641 gatagcctgg ccgactgccc agctggcggg acactgattc ggtcgcccag tttacacacc 5701 tacgacatac cgccccgccc cccgccaaac ccgccctgcc cttcttgctc actaaccaag 5761 catatttgat taataattta ttattattac attaaaatat acttagtagc ctgtaagtaa 5821 agctaattaa tgctaattag aaaacatcta atgtgtacta aacatcagta ttgagttaag 5881 tgtgtttttt tttcccgacc ctcgggtcga accccttttt tttttgctta taaaatgtac 5941 tatgcgaata atacatatac acacatatat acgatatata aacttaagcg agtagagatg 6001 caaaatctgc acaaaggaag tggcaaggag tcatctaaac gaatctacac tctaaacata 6061 tatgcaggca cgatcgttcg gatcgtgtgt gccaccaccc tggagaccaa aagcacagtt 6121 caacaatcac agcaacaatc aatcattcat tcaatcaagc gatctagcta tctagcgatc 6181 agtgcatacc atcaaactac acaaaaggca tttaggtgtg aatgggtttc gtgttttttt 6241 aagaagctaa accatattat attaaagtat aaaccactac attttaatat ttatgttcga 6301 ctaaacactg ctatcaaccc tcgagatata cataaataca tacatatttt ttttgtatac 6361 tttgtaaaat atgtgacaca taatccaaat agcaagcaaa taaataacca aaataaaaca 6421 aa