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LOCUS XM_017146761 6970 bp mRNA linear INV 09-DEC-2024 protein sprint (spri), transcript variant X1, mRNA. ACCESSION XM_017146761 VERSION XM_017146761.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017146761.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6970 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6970 /gene="spri" /note="Src homology 2 domain-containing protein sprint; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108060859" CDS 838..6225 /gene="spri" /codon_start=1 /product="protein sprint isoform X1" /protein_id="XP_017002250.3" /db_xref="GeneID:108060859" /translation="MVNAVMDAIALLSSLASDLDIMLNDLRSAPSHAATTTTTTTATA TATAALATATIMPTNQQHHLHNQQQIQSRQLQAHHWQSINNNKNNNISNNNNNNNKSN NNNNILPHPPCLIDIKLKSSRSAATTLTTSNQLQQRQQRRVAPKPLPRPPRRSRPLAQ REAGQGAGAGEEDGEDTDASDLANMTSPLSASAAATRINGLSPEVKKVQRLPLWNGRS GGSGTGNGSTTHHCHPTNVSVQRRLPIQSHQQRILTHRFQQQRPQQRTSEPLPSAGAT PSSLEAASVDAGGNNNNINNNHNGQQSQKSQQQASLSAISSKLNVLAAQSNLNNNNTS SQSGSMTSASNQKQNQNQHQNFNQNQSTDSRRSSSLDPDGDVDDVVDAVHGGAFEDDM QALLPKCSRRSRDELSQSRTSLVSSSEGGILAEGETSSEDDEEEPVEAEDEDEGEEES SRDSSDNSPPCDLGLMERLLVTHPMWFLPGIQRSGAVHLLQGKEEGTFIVRGSSQPNT MAVSVRLPQDTGPYIEHYLIQSHDNVLSLESSRFTFGSIPSLIAHYAQCCDELPVQLM LPRVLREANNRKKLSSLALLGQEFWSYASSPALLGGPPTPTVAPSSRDQQQQQHLLDA KSPLSLTETSGLGTATFFSDALVKPPPTGAPPLPGSSSLFSPTGSGQLLGFFSQAGTP SDTTNSSLSSFTTSGGQHLQLLSPNSVDSVILTMSPVDNPGHYLPGSMGGAAPTAICP SLIEQQQQQQQLSTFKVAPAAADQVVDQVRPQRPKPPNTLNLKPPAPPLRWSKPHSPD QNGGGANGNFTVTTTVTFSMENGGGGGGGLASGAAAGNGSGKFVEVTTPAANNPFNAL LNGQASTFQTFAKRLSPEGECKDTLSSQGSSSNDGRWPPTASRKLLTANSPLTPLTPS GGSSSSGGKSRKSRAGKESQHYKESDILESPPLQYCASALSDKISDYEDVWSHDPSDR ASLLTSFRPVLDSVGGVMNLRPDLLAETPSTPTPTQHLTPCEEETTTATPNESSSQSL LQFSGDVPARSRAGLLLPNLSGQAPPAAMSQSMSAAEDDGGDTTPTAEGQNLGGSSRS KQGSPFYAEPADALRQAGLTSAATAILRRQHRSQMLHASQRHSEPLKAGFGGSGNGAM LPSELEKLAGSLDELKPKPKVSQQQKQSQQQQQPSKRARNLIDHWQLDSSWEFMAKQD QGSGSDYDAAAIDWQEKENSLGKKRTLTIHQIIANRLPDLNLPELVRCSTPPSQTSAL QPHVQGQDKDKDKVGLGCRLSSYDNVFCQNSFGGIDSAQSDDGTIFSEPWDSSQWDSF LPHDDATINSDTIHLSKCRPALSEDDTIAEELQSTKDGSNGSCNQDTLKANRNGGAGH HKPNNTTNGKANSRPKVATILRNPSMRDREVLCHPRNKMSIQGSGPGDSLRAYTLQLA QDPSSTFARNIENFICCTKESREAAPQVVMRNMRQFMSGMKNYLVKHGEGKFHAELET ARSRLKSDEFLNLDAMLETVMHQLVVLPLREHLYGIFVDHYQRSEDIQLLAQNVRYAC EREAADFGIRPTVTPPSQAALRLIANLLWRLQEAELPLDKLELFLCVISTVFDATGCP RGQQLGADDFLPVLVYVVAKCGFVGAEIEAEFMWGLLQPTLLNGEPGYYLTALCSAVQ VLKTFMASEGESGSGSLDWRSSCLPACSSVLRVIIPDECNGSLQTRTLPVRPHTTTRE VCRIIAHKARITNPQDYALFKLVDGEETLLTDAECPQDARLAAKGKHCMLAYKRIDAK IAWPTAQLAGH" misc_feature 2230..2523 /gene="spri" /note="Src homology 2 (SH2) domain; Region: SH2; cl15255" /db_xref="CDD:472789" misc_feature order(2284..2286,2338..2340,2410..2412,2416..2418) /gene="spri" /note="phosphotyrosine binding pocket [polypeptide binding]; other site" /db_xref="CDD:198173" misc_feature order(2413..2415,2494..2496) /gene="spri" /note="hydrophobic binding pocket [polypeptide binding]; other site" /db_xref="CDD:198173" misc_feature 5563..5859 /gene="spri" /note="Vacuolar sorting protein 9 (VPS9) domain; Region: VPS9; pfam02204" /db_xref="CDD:460489" misc_feature 5929..6183 /gene="spri" /note="Ras-associating (RA) domain of Ras and Rab interactor (Rin) protein family; Region: RA_Rin; cd01776" /db_xref="CDD:340474" polyA_site 6970 /gene="spri" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gccacagaca gtcacagtcg gttggttggt tggttttctg gtcggttgtc cggtggaatc 61 gtcgcgtaaa tgccgctagg gaaacgaaac gaaaaaccgt aatacccgca gtaatacccg 121 aggctccaga tccggaatcc gaaaagccgt agccgtgtag tcaaaggcgt atcgccagaa 181 ttgctgcagc taaaagctaa ataaattatg tgtcgcgcaa gatcgctgcg tgtcgcgctc 241 aattaaatac acatattttt tgcctttatt ttcccctagt ctttattttt atttgtgttt 301 tctttatttt tttttcattt gcaccacatc gttgttattt atatttaatt gtttaataac 361 aacagcagca acagccaagt aaagtgcgaa aagtgaagtg gagttttgcc gacgagtgag 421 tgcgagtgat cgcgagtgcg cacaaaattg gagcagtgat cttgagttcc cgagatctag 481 agttcctaag ttccagagtt tcgtttggca attgccgatt cgtatggcgt ttggcgttcc 541 cttggtagag gagcacgtac cgaccgccac cacctgtcgt taattaaatg tcaacagatc 601 cgagaggagg ggagcaggaa gatccagccg aagagtccga ggagccaaat gaattggaat 661 cggaactggg atccactacc agcatatccc agtatatata cttaacccaa acgaaattgt 721 gcaaaatgtt tgcgcgactg tcaaataaat cataagaaca agaataagaa cgaagaaaca 781 ataagctggg cgaaacaaaa aaggagaagc agacaaatct cggcgaaaat aaggaaaatg 841 gttaatgcgg tgatggatgc catagcgctg ctcagctcgc tggccagcga cttggacata 901 atgctaaacg atcttcgttc ggcgccgagt catgctgcaa caacaacaac aacaacgaca 961 gcaacagcaa ccgcaacagc ggcattagca acagcaacaa taatgccaac gaaccaacaa 1021 catcatctcc ataatcagca gcaaatccaa tcaaggcaat tgcaggcaca tcattggcag 1081 agcataaaca acaataagaa taacaacatc agtaacaata ataataacaa taataagagc 1141 aataataata ataatatttt gccacaccca ccttgcctga tcgacatcaa attaaagtca 1201 agccgatcgg cagcaaccac attaacaacc tccaatcagc tgcaacaacg acaacaacga 1261 cgtgtggccc ccaaaccgtt gccacgcccc ccgcgacgta gccgcccctt ggcgcaaagg 1321 gaggcggggc agggggcggg ggcgggagag gaggatgggg aggatacgga tgccagtgac 1381 ctggccaata tgacgtcacc gctgagcgcg agtgcagcgg ccactcgaat caacggcctc 1441 tcgccggaag tgaaaaaggt ccagaggctg ccactgtgga atggtcggag cggtggcagc 1501 ggaaccggaa acggaagcac cacccaccac tgccacccaa ccaacgtcag cgtgcagcgc 1561 cgtctgccaa tccaaagtca tcagcagcga attctgaccc atcgatttca acagcagcgt 1621 cctcagcaaa ggacaagtga accgctgccc tctgccggag ccacgccctc ttctttggag 1681 gcggcctctg tggatgccgg tggcaacaac aataacatca acaacaatca caatggccaa 1741 cagtcacaga aatctcagca gcaggcgagt ctcagcgcca tcagcagcaa actgaatgtc 1801 ttggccgccc aatcgaatct gaacaacaat aatacgagca gtcagtcagg atccatgaca 1861 tctgcctcga atcagaaaca gaatcaaaat cagcatcaga atttcaacca aaatcagagc 1921 acagacagtc ggcggagcag cagcctggat ccggatgggg atgtggatga tgtcgtggac 1981 gcggtccatg gcggcgcctt cgaggatgat atgcaggccc tgttgcccaa atgctcgcgt 2041 cgctcccgag atgagcttag tcagtcgcgc acatctctgg tgtccagctc ggagggcggc 2101 atcctggccg agggcgagac gtccagcgag gatgacgagg aggagcccgt ggaggcggag 2161 gacgaggatg agggcgagga ggagagcagc cgggattcca gcgacaattc gccgccctgc 2221 gatctgggac tcatggagcg cctgctggtg acccatccga tgtggttcct gcccggcatc 2281 cagcgctccg gggccgttca tctgctccag ggcaaggagg aggggacctt catagttcgc 2341 ggttccagcc agccaaacac gatggccgtt tcggtgcgac tgccccagga tacgggaccc 2401 tatatcgagc actatctcat ccagtcgcac gacaatgtcc tgagcctcga gagctcgcgc 2461 ttcacgttcg gctcgatacc ttcgctaatt gcccactacg cccagtgttg cgatgagctg 2521 ccggtgcagc tgatgttgcc gcgtgtcctg cgggaggcga acaatcgcaa gaagctgagc 2581 tccttggccc tgctgggtca ggagttctgg agctatgcca gcagtcccgc cttgttgggt 2641 ggtccgccca cgccaacggt ggcgccatcg tcaagggatc agcagcagca gcagcatctg 2701 ctggatgcca agtcgccgct ctcgctgacc gaaaccagtg gcctcggaac ggccaccttc 2761 ttcagcgatg ccctggttaa gccaccgccc acaggagcac cgcctcttcc aggaagtagt 2821 tccctcttca gtcccaccgg aagtggccag ttgctgggat tcttcagcca ggcgggaact 2881 ccttcggata cgacaaactc aagcctcagc tccttcacca ccagcggggg tcagcacctg 2941 cagctgctga gtccgaattc ggtggattcg gtgattctaa ccatgtcgcc ggtggacaat 3001 ccgggtcatt atctgcccgg ttcgatgggc ggagcagctc caacggccat ttgcccatcg 3061 ttaatcgagc agcagcagca gcaacagcag ctgagcactt tcaaggtggc tccagcggca 3121 gcggatcaag tggtggatca agtgcgtccg cagcgaccga agccgccgaa cacattgaat 3181 ctcaagccgc cggcaccgcc gttgcgctgg tccaagccgc actcgccgga tcagaatgga 3241 ggaggggcca atggcaactt tacggtcacc accacggtta ccttttcgat ggagaatggt 3301 ggtggaggag gcggaggatt ggccagtgga gcggcggcgg gaaatggcag tggcaaattc 3361 gtggaggtca ccacgccggc ggccaataat cccttcaatg ccctgctcaa cgggcaggcc 3421 agcactttcc agaccttcgc caagcgactg tcgccggagg gcgagtgcaa ggatacgctg 3481 tcctcgcagg gatcctcctc gaacgatggc cgctggccac cgacggctag ccgtaagctc 3541 ctcaccgcga actctcccct gactccgctg acgcccagcg gcggcagcag cagcagtggc 3601 ggcaagtcaa ggaaatcgcg agcgggcaag gagtcacagc actacaaaga gtccgacatc 3661 ctcgagagcc cgccgctaca gtattgcgcc agtgcgctga gcgacaagat cagcgactac 3721 gaggacgtct ggtcgcacga tccgagtgat cgggccagcc tgctcaccag cttccgcccc 3781 gttctggact cggtgggcgg ggtgatgaac ctgcgacccg atctgctggc cgagactccg 3841 agcactccca cacccacgca gcacctaacg ccctgcgagg aggaaaccac cactgccacg 3901 cccaacgaat cctcgagcca atccctgctc cagttctccg gcgacgttcc ggcccgctcc 3961 cgggcaggtc tgctcctgcc gaatctctcg ggacaggcgc cgcccgcggc catgtcgcaa 4021 tcgatgtcgg cggccgagga cgatggcggc gataccacgc ccacggccga gggccaaaac 4081 ctcggcggca gcagtcgcag caagcagggc agtccattct acgccgaacc ggcggatgca 4141 ctgcgtcagg caggcctgac cagtgcggcc accgccattc tgcggcgcca gcatcgcagc 4201 caaatgctgc acgccagcca aagacactcg gaaccactga aagcgggctt cgggggatca 4261 ggaaatgggg caatgctccc cagcgaactg gagaagctgg ccggcagcct ggacgagctg 4321 aagcccaagc cgaaggtctc ccagcagcaa aagcaatcgc aacagcagca acagcccagc 4381 aagcgggcac gcaatctcat cgatcactgg caactggaca gcagctggga gtttatggcc 4441 aagcaggatc agggatcagg cagcgactac gatgcggcgg ccatcgattg gcaggagaag 4501 gagaattcgc tgggcaagaa gcgtacgctg accatacacc agatcatcgc gaacagattg 4561 cccgatctca atctcccaga gctggtgaga tgctcgacgc cgccttcgca aacgagcgcc 4621 ctgcagccgc atgtccaggg acaggataag gataaggata aggtcggact gggttgccgg 4681 ctctcctcgt acgacaacgt cttctgccag aactccttcg gtggcatcga ttcggcccag 4741 tccgatgatg gcaccatttt ctccgagccc tgggactcct cccagtggga ctccttcctg 4801 ccccacgatg atgccaccat caactcggac accattcatc tgtccaagtg ccgacccgct 4861 ctctccgagg acgacacgat cgccgaggaa ctgcaaagca ccaaagacgg cagcaatggc 4921 agctgcaacc aggatacatt gaaggccaac aggaatggtg gtgctggaca ccacaagccc 4981 aacaatacca ccaatggcaa ggccaacagt cgacccaagg tggccacaat tctgcggaac 5041 cccagcatgc gggatcgtga agtcttatgt cacccccgca acaagatgag catccagggc 5101 agcggccccg gcgactcttt gcgcgcctac accctccagt tggcccagga tcccagctcc 5161 acgttcgccc gcaacatcga gaacttcatc tgctgcacca aggagtcgcg cgaggcggcg 5221 ccccaggtgg tgatgcgcaa tatgcgtcag tttatgagcg gcatgaagaa ctatctggtg 5281 aagcatggcg agggcaagtt ccacgccgaa ctggagactg cgaggtcgcg tttgaagtcc 5341 gatgagtttc tcaatctgga tgccatgctg gagactgtga tgcatcagct ggtggtgctg 5401 ccgctgcggg agcatctgta cgggatattc gtggatcact atcagcgcag cgaggacatc 5461 cagctgctgg cccagaatgt acgctatgcc tgcgaacggg aggccgccga ctttggcatc 5521 cggccaacgg ttacgccgcc ctcgcaagcg gcactgcggc tgatcgccaa cctgctgtgg 5581 cgcctccagg aggccgagct gccgctggac aagcttgagc tcttcctctg cgtcatctcg 5641 accgtgttcg atgccaccgg ctgtccgcgt ggccagcagc tgggcgccga tgacttcctg 5701 cccgtcctcg tctatgtggt ggccaaatgc ggttttgtgg gcgccgagat cgaagcggag 5761 ttcatgtggg gcctcctcca gccgacgctg ctcaacgggg agccgggcta ctacctaacc 5821 gccctctgca gcgccgtcca ggtgctcaag accttcatgg cctccgaggg ggagagcggc 5881 agcggatccc tggactggcg ctccagctgc ctgcccgcct gctccagtgt gctgcgcgtg 5941 atcattcccg acgagtgcaa tggatcgctg cagacccgca ctttgccggt gcgaccccac 6001 acgaccaccc gcgaggtgtg ccgcatcatt gcccacaagg cgcgcatcac gaatccgcag 6061 gactacgccc tcttcaagct ggtcgacggc gaggagacgc tgctgacgga cgccgagtgt 6121 ccgcaggatg cccgactggc ggccaagggc aagcactgca tgctggccta caagaggatc 6181 gatgcgaaga tagcctggcc gactgcccag ctggcgggac actgattcgg tcgcccagtt 6241 tacacaccta cgacataccg ccccgccccc cgccaaaccc gccctgccct tcttgctcac 6301 taaccaagca tatttgatta ataatttatt attattacat taaaatatac ttagtagcct 6361 gtaagtaaag ctaattaatg ctaattagaa aacatctaat gtgtactaaa catcagtatt 6421 gagttaagtg tgtttttttt tcccgaccct cgggtcgaac cccttttttt tttgcttata 6481 aaatgtacta tgcgaataat acatatacac acatatatac gatatataaa cttaagcgag 6541 tagagatgca aaatctgcac aaaggaagtg gcaaggagtc atctaaacga atctacactc 6601 taaacatata tgcaggcacg atcgttcgga tcgtgtgtgc caccaccctg gagaccaaaa 6661 gcacagttca acaatcacag caacaatcaa tcattcattc aatcaagcga tctagctatc 6721 tagcgatcag tgcataccat caaactacac aaaaggcatt taggtgtgaa tgggtttcgt 6781 gtttttttaa gaagctaaac catattatat taaagtataa accactacat tttaatattt 6841 atgttcgact aaacactgct atcaaccctc gagatataca taaatacata catatttttt 6901 ttgtatactt tgtaaaatat gtgacacata atccaaatag caagcaaata aataaccaaa 6961 ataaaacaaa