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PREDICTED: Drosophila takahashii inactive selenide, water


LOCUS       XM_017146739            1455 bp    mRNA    linear   INV 09-DEC-2024
            dikinase-like protein (LOC108060841), mRNA.
ACCESSION   XM_017146739
VERSION     XM_017146739.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017146739.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1455
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1455
                     /gene="LOC108060841"
                     /note="inactive selenide, water dikinase-like protein;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 23 Proteins"
                     /db_xref="GeneID:108060841"
     CDS             105..1301
                     /gene="LOC108060841"
                     /codon_start=1
                     /product="inactive selenide, water dikinase-like protein"
                     /protein_id="XP_017002228.2"
                     /db_xref="GeneID:108060841"
                     /translation="MSYAADVLNSAHLELHGGGDAELRRPFDPTAHGLDASFRLTRFA
                     DLKGRGCKVPQDVLSKLVAALQQDYSAQDQEPQFPNVAIPRIGIGLDCSVIPLRHGGL
                     CLVQTTDFFYPIVEDPYMMGKIACANVLSDLYAMGVTDCDNMLMLLAVSTKMTEKERD
                     AVIPLVMRGFKDSALEAGTTVTGGQSVVNPWCTIGGVASTICQPSEYIVPDNAVVGDV
                     LVLTKPLGTQVAVNAHQWIDQPERWNRIKLVVSEEDVRKAYHRAMDSMSRLNRLAARL
                     MHKYNAHGATDITGFGILGHAQTLAAHQKKDVSFVIHNLPVIAKMAAVAKACGNMFQL
                     LQGHSAETSGGLLICLPREQAAAYCKDIEKQEGCQAWIIGIVEKGDKTARIIDKPRVI
                     EVPAKD"
     misc_feature    222..1232
                     /gene="LOC108060841"
                     /note="Selenophosphate synthetase (SelD) catalyzes the
                     conversion of selenium to selenophosphate which is
                     required by a number of bacterial, archaeal and eukaryotic
                     organisms for synthesis of Secys-tRNA, the precursor of
                     selenocysteine in selenoenzymes. The...; Region: SelD;
                     cd02195"
                     /db_xref="CDD:100031"
     misc_feature    order(411..422,426..428,432..434,498..500,531..533,
                     540..542,549..551,657..659,678..683,693..695,999..1001)
                     /gene="LOC108060841"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:100031"
     misc_feature    order(486..488,498..500,651..659)
                     /gene="LOC108060841"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:100031"
     polyA_site      1455
                     /gene="LOC108060841"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgtgacatct cgttcgttgg aaaagcaaaa ccaggcgcaa aataaaaaaa atttccccat
       61 acaattctcg ttgtacctac gcacaagcaa aaccgtaaag caagatgagc tacgccgctg
      121 atgtcctgaa ctcggcccac ttggagctgc atggcggtgg cgacgccgag ctgcgtcgtc
      181 ccttcgatcc cacggcccac ggtttggacg cctcgttccg gctcacccgg ttcgccgacc
      241 tcaagggtcg cggctgcaag gtgccgcagg atgtgctctc caagctggtg gccgccctgc
      301 agcaggacta ctccgcccag gaccaggagc cgcagttccc caacgtggcc atcccccgga
      361 tcggcatcgg tctggactgc tccgtcattc cgctgcggca cggcggcctc tgcctggtgc
      421 agaccaccga tttcttctac cccattgtcg aagatcccta catgatgggc aaaatcgcct
      481 gcgccaatgt gctgagcgac ttgtatgcca tgggagtcac cgattgcgac aacatgctga
      541 tgctcctggc ggtcagcacc aagatgacgg agaaggagcg cgacgcggtc atcccgctgg
      601 tcatgcgagg cttcaaggac tcggctctgg aggcgggcac cactgtaact gggggccaga
      661 gcgtggtcaa cccctggtgc accattggcg gcgtggcctc gaccatctgc cagcccagcg
      721 agtacattgt gcccgacaat gcggtcgtgg gcgatgtcct ggtgctgacc aagcccctgg
      781 gcacccaggt ggccgtgaat gcccaccagt ggattgacca gccggagcgc tggaaccgca
      841 tcaagctggt ggtgtccgag gaggatgtgc gcaaggccta tcatcgcgcc atggactcca
      901 tgtcgcggct gaatcgcctg gccgctcgcc tcatgcacaa gtacaatgcc cacggggcca
      961 ccgacatcac gggattcgga atactgggcc atgctcaaac tttggccgcc catcagaaga
     1021 aggacgtgtc gtttgtcatt cacaatctgc cggtgatcgc caagatggcc gcggtggcca
     1081 aggcctgcgg caacatgttc cagctgctgc agggccattc ggccgagacc tcgggaggat
     1141 tactcatctg cctgccgcgc gagcaggcgg ccgcctattg caaggacatc gagaagcagg
     1201 agggctgcca ggcctggatc attggcatcg tcgagaaggg cgacaagacc gctcgcatca
     1261 tcgacaagcc gcgcgtcatc gaggtgcccg ccaaggatta ggtcgaatcc agaacgacct
     1321 gcccgatttt tctaccttaa gtaatttcat cggtctttgt tttttataaa aaagcttatc
     1381 aactacagat tctctgatca ctataatcat ggacgtcgct attgaaatac gagtgaataa
     1441 aatgaaaaca cttga