PREDICTED: Drosophila takahashii Tryptophan 2,3-dioxygenase

LOCUS       XM_017146720            1411 bp    mRNA    linear   INV 09-DEC-2024
            vermilion (v), mRNA.
ACCESSION   XM_017146720
VERSION     XM_017146720.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017146720.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1411
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1411
                     /gene="v"
                     /note="Tryptophan 2,3-dioxygenase vermilion; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:108060827"
     CDS             110..1249
                     /gene="v"
                     /codon_start=1
                     /product="tryptophan 2,3-dioxygenase"
                     /protein_id="XP_017002209.1"
                     /db_xref="GeneID:108060827"
                     /translation="MSCPYAGNGNDHDDSAVPLTTEVGKIYGEYLMLDKLLDAQCMLS
                     EEDKRPVHDEHLFIITHQAYELWFKQIIFEFDSIRDMLDAEVIEETKTLEIVKRLNRV
                     VLILKLLVDQVPILETMTPLDFMDFRKYLAPASGFQSLQFRLIENKLGVLTEQRVRYN
                     QKYSDVFSEEEARNSIRSSEKDPSLLELVQRWLERTPGLEEDGFNFWAKFQESVDRFL
                     EAQVQSAMLEPVEKAKNYRLMDIEKRREVYRSIFDPAVHDALVRRGDRRFSHRALQGA
                     IMITFYRDEPRFSQPHQLLTLLMDIDSLITKWRYNHVIMVQRMIGSQQLGTGGSSGYQ
                     YLRSTLSDRYKVFLDLFNLSTFLIPREAIPPLDETIRKKLINKSV"
     misc_feature    140..1180
                     /gene="v"
                     /note="Tryptophan 2,3-dioxygenase; Region:
                     Trp_dioxygenase; pfam03301"
                     /db_xref="CDD:281317"
     polyA_site      1411
                     /gene="v"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gttatgatcg gttcgctggg gtctcatcgt ctcatctccc catctccgca tctctggtcc
       61 gcgaccgctt cagtttgccg gcgtccaccg ttcgacgagc cacgccacca tgagctgtcc
      121 ctacgcagga aacggaaacg accacgacga ctcggcggtg cccctgacca cggaggtggg
      181 aaaaatctac ggggagtacc tgatgctgga caaactgctg gatgcacagt gtatgctctc
      241 cgaggaggac aagcgacccg tccacgatga gcacctgttt atcatcacgc accaggccta
      301 cgagctttgg ttcaagcaga tcatcttcga gttcgactcc attcgggaca tgctggatgc
      361 agaggtcatc gaagagacca agaccctgga gattgtcaag cgactaaacc gagtggttct
      421 cattctgaag cttctagtgg accaggtgcc cattctggag acgatgaccc cgctggactt
      481 catggacttt cgcaagtacc tggcgcccgc gtctggcttt cagtcgctgc agttccgcct
      541 gatcgagaac aagttgggtg tgttgaccga gcagcgggtg aggtacaacc agaagtactc
      601 ggatgtcttc agcgaggagg aggcgcgcaa ttcgatccgg agctcggaga aggatccctc
      661 gctgctggag ctggtgcagc ggtggctgga gaggacgccg ggcctggagg aggacggctt
      721 caacttctgg gccaagttcc aggagagcgt ggatcggttc ctggaggcac aggtccagag
      781 cgccatgctc gagccggtgg agaaggccaa gaactatcgg ctgatggaca tcgagaagcg
      841 acgagaggtg taccgctcca tcttcgatcc ggcggtccac gatgcgctgg tgcggcgcgg
      901 tgaccgccgg ttcagccatc gggccctcca gggcgccatc atgatcacct tctaccggga
      961 cgaaccgcgc ttcagccagc cccaccagct gctcaccctg ctgatggaca ttgattcgct
     1021 gatcaccaag tggcgatata atcacgtgat catggtgcaa cgcatgattg gatcccagca
     1081 gctgggcacc ggtggatcgt ccggatatca atatctgcgc tccactctca gtgatcgcta
     1141 caaggtgttt ctggatcttt tcaacctgtc caccttcctg attccccgcg aggcgattcc
     1201 tccgctggat gagaccattc gcaagaagct gatcaacaag agcgtctgac gatcggcagg
     1261 ggatccagat ccaatcgagc agtgtttggc tatgactttc attttctacc aacagtttaa
     1321 ttttttgtgt aataaaatca cttgttatta catttatggt gtttattatt ctggctaact
     1381 gaaaaattaa aattaaagcc atctaagtaa a