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LOCUS XM_017145993 2337 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017145993 VERSION XM_017145993.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017145993.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2337 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2337 /gene="dah" /note="discontinuous actin hexagon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:108060329" CDS 106..2034 /gene="dah" /codon_start=1 /product="uncharacterized protein dah" /protein_id="XP_017001482.2" /db_xref="GeneID:108060329" /translation="MLGMSVPVQLTKMRNSAEAVATIAREKQIKTQGQGQQVAKDFDL TTIMEQLQRDYADYKYTVYRCASKLVALQKIFHTGKIPYKLLLAILERHNLNGGGLEL MVPPFQLTSLLHDVYFASEKLGHFQQDSSSYQLERSTSLLANFFWNVYDPHRRHSISL LEIKITFILLCKLFSSDHLIGDFFALLADPKSQIISRYAFEQLLSTLGKLLGYLGESK AYGLHNLPLALEQSFARCPHGVGGLTESQFHKLWTAGQTRFLIYGNLLSLVKRIEDTE SLIHSNSCAGCRREHIVGIRFRCQVCRDVSLCLPCFAVGFAGGRHEPGHRMCEVFVED QPPLRWTRHLARLCGWLTMPGRKTQPEEERRGFCNAQESGAASVVTPIPAETRSVRSQ CQEKDRTVILQQQELCSLTGLASKASSRLQSIIDRLLLQNAKLESQLQTVQTASSSEI SLFLSAHQSFLLQIIEDMRQLSHSSVAASPPLPAPPVAPPVAPLVSSTFLSSSTPQRQ IFDMYAPVGANLTHSINGADLNRSYLEANKSDYSLNDISLWFDQRRSSVQPGPGSLPA PLPLPMPLGALLEQKQQPTNGGDTEMVNFKLLLHKVKEIVEDSYSDNAELSAATQNLE NVLDSIIKGEEQHRRIST" misc_feature 349..864 /gene="dah" /note="EF-hand-like motif found in the dystrophin/dystrobrevin/dystrotelin family; Region: EFh_DMD_DYTN_DTN; cl07621" /db_xref="CDD:352774" misc_feature 349..471 /gene="dah" /note="EF-hand-like motif [structural motif]; Region: EF-hand-like motif" /db_xref="CDD:319999" misc_feature 508..612 /gene="dah" /note="EF-hand-like motif [structural motif]; Region: EF-hand-like motif" /db_xref="CDD:319999" misc_feature 631..744 /gene="dah" /note="EF-hand-like motif [structural motif]; Region: EF-hand-like motif" /db_xref="CDD:319999" misc_feature 781..864 /gene="dah" /note="EF-hand-like motif [structural motif]; Region: EF-hand-like motif" /db_xref="CDD:319999" misc_feature 949..1095 /gene="dah" /note="Zinc finger, ZZ type. Zinc finger present in Drosophila dah and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dah (discontinuous actin hexagon) is a membrane associated...; Region: ZZ_dah; cd02345" /db_xref="CDD:239085" misc_feature order(955..957,964..966,1000..1002,1009..1011,1027..1029, 1036..1038,1066..1068,1078..1080) /gene="dah" /note="Zinc-binding sites [ion binding]; other site" /db_xref="CDD:239085" misc_feature order(955..957,964..966,1027..1029,1036..1038) /gene="dah" /note="zinc cluster 1 [ion binding]; other site" /db_xref="CDD:239085" misc_feature order(958..960,991..993,997..999,1015..1017,1021..1023) /gene="dah" /note="putative charged binding surface [active]" /db_xref="CDD:239085" misc_feature order(994..996,1039..1041,1084..1086,1093..1095) /gene="dah" /note="putative hydrophobic binding surface [active]" /db_xref="CDD:239085" misc_feature order(1000..1002,1009..1011,1066..1068,1078..1080) /gene="dah" /note="zinc cluster 2 [ion binding]; other site" /db_xref="CDD:239085" polyA_site 2337 /gene="dah" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atttgatatt taacggaagg caagaggaag agcgatcgcg aaaagcgacg cggttaaagg 61 aaatagaaaa cctgggaaat tacacaaaaa ccaagtgatt gcaaaatgct gggaatgtcg 121 gtgcccgtgc agctgaccaa gatgcgcaac agcgccgagg cggtggccac catagccagg 181 gagaagcaaa taaaaaccca aggacaaggg caacaggtgg ccaaggattt cgatttgacc 241 acgataatgg agcaactgca gcgggattac gcggattaca agtacacggt ctaccgctgt 301 gccagtaaat tggtggccct gcaaaagata ttccacacgg gaaagattcc ctataaactt 361 cttttggcca ttctggagcg gcacaacctg aacggcggcg gcctggagct gatggtgccg 421 cccttccagc tgacctcgct cctccacgac gtctactttg ccagcgagaa gctgggacac 481 tttcagcagg attcgtcttc ctaccaattg gagagatcca ccagcctgct ggccaacttc 541 ttctggaatg tctacgatcc acaccgccga cattcgattt ccctgctgga gatcaagatc 601 accttcatcc tgctgtgcaa gctctttagc agcgatcatc tgatcggcga cttcttcgcc 661 ctgctcgccg atcccaagtc gcagatcatc tcgcgctacg ccttcgagca gctcctctcc 721 acgctgggca agctactcgg ctatttgggc gagtccaagg cctatggcct ccacaatttg 781 ccgctggctt tggagcagag cttcgcccgc tgtccacatg gcgtcggtgg attgacggag 841 tcgcagttcc acaaactctg gacggccgga cagacgcgct tcctcatcta cggcaatctg 901 ctgtcgctgg tcaaacgcat cgaggatacg gagagcctga tacacagcaa ctcgtgtgcc 961 ggctgccgca gggagcacat tgtgggcatt cgctttaggt gccaggtgtg ccgcgatgtc 1021 tccctgtgcc tgccctgctt tgccgtgggc tttgccggcg gccgccatga gccggggcat 1081 cggatgtgcg aggttttcgt cgaggatcag ccgccgctgc gttggacccg ccatttggcc 1141 aggctgtgcg gctggctgac gatgcccggg cgcaaaacgc agccggagga ggagcgtcgc 1201 ggcttctgca atgcccagga gagcggtgcc gcctccgtgg tcactccgat tcccgccgag 1261 acgcgcagtg tgcgtagtca gtgccaggag aaggatcgca ctgtgatcct tcagcagcag 1321 gagctctgct cgctcaccgg actggccagc aaggcctcct caaggctgca gtccatcatc 1381 gatcgcctgc tgctgcagaa tgcgaaactg gagagccagc tgcaaacggt gcaaaccgcc 1441 tcgagttcgg aaatctcgct gtttctcagc gcccatcaga gtttcctgct gcagatcatc 1501 gaggatatgc ggcagctatc gcactcgtct gtggctgcct cgccacctct gccggctcct 1561 ccagtggccc ctccggtggc tcccctggtc agctccacct tcctcagctc cagcacgccg 1621 caaaggcaga tcttcgatat gtacgcaccc gttggcgcca atctcacgca ctccataaat 1681 ggcgccgacc tgaatcgcag ctacttggag gccaacaagt cggactattc cctgaacgac 1741 atcagcctgt ggttcgatca gcgtcgctcg agcgtgcagc cggggcctgg atccctgcct 1801 gctcctctgc cgctgcccat gccgctgggc gccctgctgg aacagaaaca gcagccaacg 1861 aacggcggcg acaccgagat ggtgaacttc aagctgctgc ttcacaaggt caaggagatc 1921 gtcgaggact cgtacagcga caatgccgag ctgtcggcgg ccacacagaa tctggagaac 1981 gtcctcgaca gcatcatcaa gggcgaggag cagcatcggc gcatcagcac gtgaggagga 2041 gcggtgacgt ccctcaaatc gattccagcc agaccaagtc cacctagctt taagttgtaa 2101 attttgatta taatcccgag acaatgattg atccaatcgt tttccaaaat gcttcaagtt 2161 gagtagatcc taagtcctct gacaatgcaa tatcataaat tgtttatata aaagaaacaa 2221 aaaacattta agaaacggaa tatattatac aattttaaga tatattccca gtttaaataa 2281 atactgaaac aaccagatat cataaattta ataaaatata ttcaaaaatt ctttaaa