PREDICTED: Drosophila takahashii autophagy protein 5 (Atg5),

LOCUS       XM_017145992            1451 bp    mRNA    linear   INV 09-DEC-2024
            transcript variant X1, mRNA.
ACCESSION   XM_017145992
VERSION     XM_017145992.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017145992.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1451
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1451
                     /gene="Atg5"
                     /note="autophagy protein 5; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 19
                     Proteins"
                     /db_xref="GeneID:108060328"
     CDS             113..922
                     /gene="Atg5"
                     /codon_start=1
                     /product="autophagy protein 5 isoform X1"
                     /protein_id="XP_017001481.1"
                     /db_xref="GeneID:108060328"
                     /translation="MAHDREVLRMIWEGQIGICFTADRDEIVGIKPEPFYLMISRLSY
                     LPLVTDKVRKYFSRYISAEHQDGAVWFDFNGTPLRLHYPIGVLYDLLHPEEDSTPWCL
                     TIHFSKFPEGTLVKLNSKELLESHYMSCLKEADVLKHRGLVISAMQKKDHNQLWLGLV
                     NDKFDQFWAVNRRLMEPYAEQESFKHIPLRIYTDDDFTYTQKLISPISEGGQKKSLAD
                     LMAELSTPVRKAVGCRTHGIDLHEETQLQWMSEHLSYPDNFLHLSVDYKDV"
     misc_feature    353..904
                     /gene="Atg5"
                     /note="Autophagy protein Apg5; Region: APG5; pfam04106"
                     /db_xref="CDD:461175"
ORIGIN      
        1 cacaaattgg acacccctgg gatctatcga taacaacccc gttttaccaa gtgcaaaaag
       61 taaaaatata attttaatca aaacaaaagc gaatttttcg gaattttgga gcatggccca
      121 cgaccgcgag gtgttgcgaa tgatctggga gggccagata ggcatctgct tcacggcgga
      181 tcgggacgag atagtgggta taaagccgga gcccttctat ctcatgatat cgcgactgag
      241 ttacttgccc ttggtcaccg ataaggttcg caagtacttc tcccggtata taagcgccga
      301 acaccaggat ggagccgttt ggttcgattt caatggcacg cccctgcgcc ttcactatcc
      361 aattggtgtc ctgtacgatc tgctgcatcc cgaggaagac agcacgccct ggtgcctcac
      421 catccacttc tccaagttcc ccgagggcac gctcgtcaag ctgaattcca aggagcttct
      481 ggagtcgcac tacatgtcct gcctgaagga ggcggatgtg ctgaagcacc gcggcctcgt
      541 gatttccgcg atgcagaaga aggatcacaa tcaattgtgg ctgggcctcg tcaacgacaa
      601 gttcgatcag ttctgggcgg taaatcgcag gctaatggag ccgtatgccg aacaggagtc
      661 cttcaagcac attcccctgc gaatctacac ggacgatgac tttacgtaca cccagaaact
      721 gatttcgccg atcagcgagg gcggacaaaa gaagagtctg gccgacctga tggccgaatt
      781 atcgacacct gtgcgcaaag cggttggatg tcgcacccac ggcatcgatc ttcacgagga
      841 aacccagcta caatggatgt ccgagcacct gagctatccc gacaactttc tgcatttatc
      901 ggtggactac aaggatgttt agccccctga ctatatgtct atatcctata tatttgccca
      961 tattttccat gttttgccca gtccgcgtgt gcgtgtatgt gtgcgtttgt gtttgtttcc
     1021 atgtgtgtgt ttgtgaaagc tgtatgtgtg tgtgctgttc tatttttcga ttccagcaaa
     1081 tcccagggcg atcctcagcg atcgatttac agtcatacat acatatatac gcctgaatgt
     1141 atatatatag aaatatacgt ctctagttaa gctaatctgt atgtaatatt tatatgatat
     1201 atgccagcat ttaaaagaag cgagcagcgc aaaccaaacg attactggaa ctacccacta
     1261 actaatagat accaacatac attataaata tacttttata cagttttttt tatttcggaa
     1321 tcccttctgc aaatttgatt ttttctaagt ttttattttc tttatatttt cttattattt
     1381 ttaagttttt attattatct gatacactga aataacatca cggaagccat tttgtattga
     1441 cctaatcaaa a