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LOCUS XM_017145986 3802 bp mRNA linear INV 09-DEC-2024 protein 18 (LOC108060323), transcript variant X2, mRNA. ACCESSION XM_017145986 VERSION XM_017145986.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017145986.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3802 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3802 /gene="LOC108060323" /note="zinc finger CCCH domain-containing protein 18; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060323" CDS 466..3462 /gene="LOC108060323" /codon_start=1 /product="zinc finger CCCH domain-containing protein 18" /protein_id="XP_017001475.2" /db_xref="GeneID:108060323" /translation="MVLDMESDDSRASSPSNSSESRSNSPTNDKEDEEMAPEQEQAEE AGGGPTLDRSVRAASTSSSSSNSSSSSSRSELSKKQKKSSSSSSGSGSGSSSSSGSSS EDEPDQEQQQQLRLPEQQQQQQEEEPLPEPAETDPESSVAAAPAEPEQPGSPSAKSQP SSFLSSVRSRSNSPQLYNQAAVDLNISHEDLSDVSDIEADEKRAPSKNSLHPADEDED GAISNDSLPAVGEEEEDELAKQNGKAASGEEGKEKKGSKEAKSDEASNGRGPSSALEE DLVKTHDDDALDFEAEEGECPEPLKEPPSSESKANETRSKDNDDDEDDDDGEVDCDED DEAKRKGNGSLEEGEEAKDKTASADKRKKDEEELEEGEVSDEDEKRPEETEPKPVCRF YTRGQCTWGMSCRFLHPGVTDKGNYTMFESLVRSVPMQGGSSGAGASGAGSSSAAASR AAASAYSSHAAAAADYHDYRNERPPLHHRPALLHAPSIYGGGVAHAVHDARPLLPSDG GPVVVENAWERGLRTAKEMMRKANKRKEQDMDFEDKKMNLTLSPDELEKDSYYLKDRG GSSARSPPPPSSSSSSVMREQQPLNPLSLPMSMHPHAVVAHGNPRTLLPPVYSLYGGP PPPDRYGRSQYMPPPQYEDVDAYGRMARYRELPPHRMPHYEDDRRSRPTREVIVQRVE AAGGRGDEWSDPWMRSKSIGRGSYDRDDRRRRDRRSYSSNSSYSTSNSSQSDSSSDSS RSSSPSDHKRRYGGSSHKLAAAAASASSRRHGGRTARSPSQIPRRPRHSSKGSLSPSY KRPALDKRGVGLSPASKRKKLSSPAPKKFDKLRRRRSSSTSDSDSSDTSYSESESGSS SSDSSSGSRDTPQKRVRATDKALNERKLIKKPAEQATKKRSPISIEIKKTSNMVGVSA LASPNNSADSDKEKEHGNGNGKDSKDKEHSSKDGKDKEGKEKDGKDKDKDGGKDKDGK KSRREELLKQLRAVEDAIAKKRSKLN" misc_feature <1039..1620 /gene="LOC108060323" /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904; TIGR00927" /db_xref="CDD:273344" misc_feature 1627..1692 /gene="LOC108060323" /note="CCCH-type zinc finger; Region: zf-CCCH_4; pfam18044" /db_xref="CDD:465626" polyA_site 3802 /gene="LOC108060323" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaagaaaag tacaaagtta agttcaaaac gtaacacagt aaccagtaaa cagtaaaagt 61 cgaaagtcag taagtgaaaa agtggttcaa gttgttaagt aaatccaatt tcggtcgcga 121 aaagtgcgca aaagtccgca aaaatgcaag tctgcaaaaa atccaaataa ttaactctct 181 cctgtgtgtg cgtctctgtg tgtgtgtgtg tgcgtgtcct taactgtgtg tgtgaggggg 241 agagagcgcg agaatagaaa gaatttttcc aattgctcac tctctctctc tcgctctctg 301 ttgtctctct cgttcgcgtc aagaaaatta atcaaaaata aaatacaaaa aaaaaacaca 361 gtagcacaca cacaatataa tcaataaatt aaaaagataa atgctaataa aagaaatgaa 421 gaaacgccaa ggaacgagtt gcccgcaccg gcgtaaggcg aacccatggt cctcgacatg 481 gaatcggacg attctcgtgc cagttccccg tccaattcct cggagtcgcg ttccaattcg 541 cccaccaacg acaaggagga cgaggagatg gctccggaac aggaacaggc cgaggaagct 601 ggtggtggtc ccactctaga ccgatcggtt cgagccgcct ccaccagcag ctcatcgtcc 661 aactccagct ccagttcgag tcgcagcgag ctgtccaaaa agcagaagaa gagctccagc 721 agcagcagcg gcagtggcag tggcagcagc tcctccagtg gctcctccag cgaggatgag 781 cccgatcagg agcagcagca gcagctccga ttgcccgaac agcagcagca gcagcaggag 841 gaggagccgc ttcccgaacc tgccgaaacg gatcccgaat cctcggtagc cgcagcgccc 901 gcggagccag agcagccagg ctcgccgagc gccaaatcgc agcccagctc gttcctctcc 961 tccgttcgca gccggagcaa cagtccccag ctgtacaatc aggccgccgt cgatctgaac 1021 atcagccacg aggatctgag cgatgtcagc gacatcgagg cggacgagaa gcgggcgccg 1081 tccaagaatt cgctgcatcc ggcggacgag gacgaggacg gggccatctc caatgactcg 1141 ctgcccgccg ttggcgagga ggaggaggat gagttggcca agcagaacgg caaggcagcc 1201 agcggggaag agggcaagga gaagaagggc tccaaggagg ccaagtccga cgaagcctcc 1261 aatgggcgtg gcccctcgtc cgccttggag gaggatctgg tgaagacgca cgacgacgac 1321 gccttggact tcgaggcgga ggagggcgag tgtccggagc cgctgaagga gcctccatcg 1381 tcggagagca aagccaacga aacaagatcg aaagataacg acgacgacga agatgatgat 1441 gatggagagg tggactgcga tgaagacgac gaggccaagc gaaagggcaa cggcagcctg 1501 gaggagggcg aggaggccaa ggacaagacg gcgtcggcgg acaagcggaa aaaggacgag 1561 gaggagctgg aggagggcga ggtgtccgac gaggacgaga agcggcccga ggagacggaa 1621 ccgaagcccg tgtgtcgctt ctacacgcgc ggccagtgca cctggggcat gagctgtcgc 1681 ttcctgcatc ccggcgtcac ggacaagggc aactacacga tgttcgagag cctggtgcgt 1741 tcggtgccca tgcagggcgg ttcctccggc gccggtgcct ccggagcggg ctcctcaagt 1801 gccgccgcat cgagggccgc agcgagtgcc tatagttccc atgccgcggc ggcggccgac 1861 tatcatgact atcgaaacga gcggccaccg ctgcaccatc gaccggcgct cctccatgcg 1921 cccagtattt acggcggcgg cgttgcccac gccgtccacg atgcccggcc gctgctgccg 1981 tccgacggcg gacccgtggt ggtggagaac gcctgggagc gcggcctgcg caccgccaag 2041 gagatgatgc gcaaggctaa caagcgcaag gagcaggaca tggactttga ggacaagaag 2101 atgaacctaa cgctgtcgcc ggatgaactg gagaaggact cgtactacct caaggatcgg 2161 ggcggcagca gtgcccgctc gccgccgccg ccgtcgtcgt cctcgtcgtc ggtgatgcgc 2221 gaacagcagc cactcaatcc gctcagcctg ccgatgtcca tgcatccgca tgccgtcgtc 2281 gcacacggca atcctcgcac cctcctgccg cccgtgtact cgctgtacgg cggaccaccg 2341 ccgcctgatc ggtacggccg atctcagtat atgccgccgc cgcagtacga ggatgtggat 2401 gcgtacggaa ggatggcgag atatcgcgag ctgccgcccc atcggatgcc gcactacgag 2461 gacgatcgaa ggtcgcggcc aacgcgcgag gtgatcgtcc agagggtaga ggcagccggc 2521 gggcgagggg atgagtggag cgatccctgg atgcgatcca agtcgattgg aaggggatcg 2581 tacgatcggg acgatcgccg gcgcagggac aggcgcagct acagcagcaa ctcgtcgtac 2641 tccacctcga acagctcgca gagcgactcc agttcggatt cgtcgcgatc gagcagtccg 2701 tcggaccaca agcggcgcta cggcggcagt tcgcacaagc tggccgccgc cgccgcctcg 2761 gcttcctcgc gccggcatgg cggtcggacg gcccggtcgc ccagccaaat accgcgccgc 2821 cccaggcact cttccaaggg cagcctttcg ccttcgtaca agcgacccgc tctggacaag 2881 cgcggcgtag gcctcagtcc cgcctccaag cgcaagaagc tctcttcgcc ggcacccaag 2941 aagtttgaca agttgcggcg acgtcgcagt tccagtacat ccgactcaga ctcatcggat 3001 acctcgtact ccgaatcgga atcgggctcc tcgtcgtcgg acagctcgtc gggatcaagg 3061 gatacgcccc agaagcgagt gagagccacc gacaaggcgc tcaacgagcg caagcttatt 3121 aaaaagcctg ctgaacaagc aaccaagaag cgttcgccta tttccattga gattaagaaa 3181 acgtcgaaca tggtgggtgt ttcggcgctg gcctcaccca acaactcagc cgactccgac 3241 aaggagaagg agcacggcaa cggcaatggc aaggacagca aggacaagga gcacagcagc 3301 aaggatggca aggataagga gggcaaggag aaggatggca aggacaagga caaggatggc 3361 gggaaggata aggatggcaa gaagtcgcgg cgagaggagc tgctgaagca gctgcgcgcc 3421 gtcgaggatg cgatcgccaa gaagcgctcc aagttaaact gatccttcct cctcctcttt 3481 gttacccagc actacccaca gacgatcccc aaaccccaaa cagtcgaccc aaccacagcc 3541 ggaagatcat cggtcggcat caatcaatac ttagaagtta cgcaacattc gcatcgtatt 3601 cgatattgcc ttggcctgtc tgctgcagcc actcgattgc aatacaattc aatgcattta 3661 ggtttaacaa tcattatgtc ctttcgcaaa tcccccttcc cctttccacc gccctgacta 3721 ccgccaataa tggagcatta aatactatgt ttataatagt ctataaataa aagccaacac 3781 taatattgag aactattctt tt