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LOCUS XM_017145985 3638 bp mRNA linear INV 09-DEC-2024 protein 18 (LOC108060323), transcript variant X1, mRNA. ACCESSION XM_017145985 VERSION XM_017145985.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017145985.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3638 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3638 /gene="LOC108060323" /note="zinc finger CCCH domain-containing protein 18; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108060323" CDS 302..3298 /gene="LOC108060323" /codon_start=1 /product="zinc finger CCCH domain-containing protein 18" /protein_id="XP_017001474.2" /db_xref="GeneID:108060323" /translation="MVLDMESDDSRASSPSNSSESRSNSPTNDKEDEEMAPEQEQAEE AGGGPTLDRSVRAASTSSSSSNSSSSSSRSELSKKQKKSSSSSSGSGSGSSSSSGSSS EDEPDQEQQQQLRLPEQQQQQQEEEPLPEPAETDPESSVAAAPAEPEQPGSPSAKSQP SSFLSSVRSRSNSPQLYNQAAVDLNISHEDLSDVSDIEADEKRAPSKNSLHPADEDED GAISNDSLPAVGEEEEDELAKQNGKAASGEEGKEKKGSKEAKSDEASNGRGPSSALEE DLVKTHDDDALDFEAEEGECPEPLKEPPSSESKANETRSKDNDDDEDDDDGEVDCDED DEAKRKGNGSLEEGEEAKDKTASADKRKKDEEELEEGEVSDEDEKRPEETEPKPVCRF YTRGQCTWGMSCRFLHPGVTDKGNYTMFESLVRSVPMQGGSSGAGASGAGSSSAAASR AAASAYSSHAAAAADYHDYRNERPPLHHRPALLHAPSIYGGGVAHAVHDARPLLPSDG GPVVVENAWERGLRTAKEMMRKANKRKEQDMDFEDKKMNLTLSPDELEKDSYYLKDRG GSSARSPPPPSSSSSSVMREQQPLNPLSLPMSMHPHAVVAHGNPRTLLPPVYSLYGGP PPPDRYGRSQYMPPPQYEDVDAYGRMARYRELPPHRMPHYEDDRRSRPTREVIVQRVE AAGGRGDEWSDPWMRSKSIGRGSYDRDDRRRRDRRSYSSNSSYSTSNSSQSDSSSDSS RSSSPSDHKRRYGGSSHKLAAAAASASSRRHGGRTARSPSQIPRRPRHSSKGSLSPSY KRPALDKRGVGLSPASKRKKLSSPAPKKFDKLRRRRSSSTSDSDSSDTSYSESESGSS SSDSSSGSRDTPQKRVRATDKALNERKLIKKPAEQATKKRSPISIEIKKTSNMVGVSA LASPNNSADSDKEKEHGNGNGKDSKDKEHSSKDGKDKEGKEKDGKDKDKDGGKDKDGK KSRREELLKQLRAVEDAIAKKRSKLN" misc_feature <875..1456 /gene="LOC108060323" /note="K+-dependent Na+/Ca+ exchanger; Region: 2A1904; TIGR00927" /db_xref="CDD:273344" misc_feature 1463..1528 /gene="LOC108060323" /note="CCCH-type zinc finger; Region: zf-CCCH_4; pfam18044" /db_xref="CDD:465626" polyA_site 3638 /gene="LOC108060323" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gcgcacggcc acaccagacg aacagccgcc atattttcac catttttttt cgagacagag 61 gttattcttt aactcataat cgcagccaga gcattttccg cagccccaca aagccaactt 121 gcaggtaaac cagccgccaa gaagccggga aaaggggctt ttcagtccac cgactaaaaa 181 gggggaaagc gcggcgctga cgtcggcaga ggcagcgcag cggcgctctc gctcgcaccc 241 acacgactca aacatagaaa cgccaaggaa cgagttgccc gcaccggcgt aaggcgaacc 301 catggtcctc gacatggaat cggacgattc tcgtgccagt tccccgtcca attcctcgga 361 gtcgcgttcc aattcgccca ccaacgacaa ggaggacgag gagatggctc cggaacagga 421 acaggccgag gaagctggtg gtggtcccac tctagaccga tcggttcgag ccgcctccac 481 cagcagctca tcgtccaact ccagctccag ttcgagtcgc agcgagctgt ccaaaaagca 541 gaagaagagc tccagcagca gcagcggcag tggcagtggc agcagctcct ccagtggctc 601 ctccagcgag gatgagcccg atcaggagca gcagcagcag ctccgattgc ccgaacagca 661 gcagcagcag caggaggagg agccgcttcc cgaacctgcc gaaacggatc ccgaatcctc 721 ggtagccgca gcgcccgcgg agccagagca gccaggctcg ccgagcgcca aatcgcagcc 781 cagctcgttc ctctcctccg ttcgcagccg gagcaacagt ccccagctgt acaatcaggc 841 cgccgtcgat ctgaacatca gccacgagga tctgagcgat gtcagcgaca tcgaggcgga 901 cgagaagcgg gcgccgtcca agaattcgct gcatccggcg gacgaggacg aggacggggc 961 catctccaat gactcgctgc ccgccgttgg cgaggaggag gaggatgagt tggccaagca 1021 gaacggcaag gcagccagcg gggaagaggg caaggagaag aagggctcca aggaggccaa 1081 gtccgacgaa gcctccaatg ggcgtggccc ctcgtccgcc ttggaggagg atctggtgaa 1141 gacgcacgac gacgacgcct tggacttcga ggcggaggag ggcgagtgtc cggagccgct 1201 gaaggagcct ccatcgtcgg agagcaaagc caacgaaaca agatcgaaag ataacgacga 1261 cgacgaagat gatgatgatg gagaggtgga ctgcgatgaa gacgacgagg ccaagcgaaa 1321 gggcaacggc agcctggagg agggcgagga ggccaaggac aagacggcgt cggcggacaa 1381 gcggaaaaag gacgaggagg agctggagga gggcgaggtg tccgacgagg acgagaagcg 1441 gcccgaggag acggaaccga agcccgtgtg tcgcttctac acgcgcggcc agtgcacctg 1501 gggcatgagc tgtcgcttcc tgcatcccgg cgtcacggac aagggcaact acacgatgtt 1561 cgagagcctg gtgcgttcgg tgcccatgca gggcggttcc tccggcgccg gtgcctccgg 1621 agcgggctcc tcaagtgccg ccgcatcgag ggccgcagcg agtgcctata gttcccatgc 1681 cgcggcggcg gccgactatc atgactatcg aaacgagcgg ccaccgctgc accatcgacc 1741 ggcgctcctc catgcgccca gtatttacgg cggcggcgtt gcccacgccg tccacgatgc 1801 ccggccgctg ctgccgtccg acggcggacc cgtggtggtg gagaacgcct gggagcgcgg 1861 cctgcgcacc gccaaggaga tgatgcgcaa ggctaacaag cgcaaggagc aggacatgga 1921 ctttgaggac aagaagatga acctaacgct gtcgccggat gaactggaga aggactcgta 1981 ctacctcaag gatcggggcg gcagcagtgc ccgctcgccg ccgccgccgt cgtcgtcctc 2041 gtcgtcggtg atgcgcgaac agcagccact caatccgctc agcctgccga tgtccatgca 2101 tccgcatgcc gtcgtcgcac acggcaatcc tcgcaccctc ctgccgcccg tgtactcgct 2161 gtacggcgga ccaccgccgc ctgatcggta cggccgatct cagtatatgc cgccgccgca 2221 gtacgaggat gtggatgcgt acggaaggat ggcgagatat cgcgagctgc cgccccatcg 2281 gatgccgcac tacgaggacg atcgaaggtc gcggccaacg cgcgaggtga tcgtccagag 2341 ggtagaggca gccggcgggc gaggggatga gtggagcgat ccctggatgc gatccaagtc 2401 gattggaagg ggatcgtacg atcgggacga tcgccggcgc agggacaggc gcagctacag 2461 cagcaactcg tcgtactcca cctcgaacag ctcgcagagc gactccagtt cggattcgtc 2521 gcgatcgagc agtccgtcgg accacaagcg gcgctacggc ggcagttcgc acaagctggc 2581 cgccgccgcc gcctcggctt cctcgcgccg gcatggcggt cggacggccc ggtcgcccag 2641 ccaaataccg cgccgcccca ggcactcttc caagggcagc ctttcgcctt cgtacaagcg 2701 acccgctctg gacaagcgcg gcgtaggcct cagtcccgcc tccaagcgca agaagctctc 2761 ttcgccggca cccaagaagt ttgacaagtt gcggcgacgt cgcagttcca gtacatccga 2821 ctcagactca tcggatacct cgtactccga atcggaatcg ggctcctcgt cgtcggacag 2881 ctcgtcggga tcaagggata cgccccagaa gcgagtgaga gccaccgaca aggcgctcaa 2941 cgagcgcaag cttattaaaa agcctgctga acaagcaacc aagaagcgtt cgcctatttc 3001 cattgagatt aagaaaacgt cgaacatggt gggtgtttcg gcgctggcct cacccaacaa 3061 ctcagccgac tccgacaagg agaaggagca cggcaacggc aatggcaagg acagcaagga 3121 caaggagcac agcagcaagg atggcaagga taaggagggc aaggagaagg atggcaagga 3181 caaggacaag gatggcggga aggataagga tggcaagaag tcgcggcgag aggagctgct 3241 gaagcagctg cgcgccgtcg aggatgcgat cgccaagaag cgctccaagt taaactgatc 3301 cttcctcctc ctctttgtta cccagcacta cccacagacg atccccaaac cccaaacagt 3361 cgacccaacc acagccggaa gatcatcggt cggcatcaat caatacttag aagttacgca 3421 acattcgcat cgtattcgat attgccttgg cctgtctgct gcagccactc gattgcaata 3481 caattcaatg catttaggtt taacaatcat tatgtccttt cgcaaatccc ccttcccctt 3541 tccaccgccc tgactaccgc caataatgga gcattaaata ctatgtttat aatagtctat 3601 aaataaaagc caacactaat attgagaact attctttt