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LOCUS XM_017145969 2053 bp mRNA linear INV 09-DEC-2024 3 (Acsf3), mRNA. ACCESSION XM_017145969 VERSION XM_017145969.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017145969.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2053 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2053 /gene="Acsf3" /note="Acyl-CoA synthetase family member 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108060316" CDS 125..1909 /gene="Acsf3" /codon_start=1 /product="malonate--CoA ligase ACSF3, mitochondrial" /protein_id="XP_017001458.2" /db_xref="GeneID:108060316" /translation="MLLLRRCHKLKLRPWIRLCSAELIHKDGFIEKLRHSFDEDERSN LVVPTFKKAMLYPDEIAVKDITGEYTYFQLYLAAKRLAIQISNICGSASLSNVTYLCS NNALWVAIQWSCWISGQVAVPLESCQAIDQLRRQASSCKTKLLIATPEFEPLAQELSQ GLQSATIILDHAFVPTAESVSSTSMYAKQLVGTQGVILTESTLPSDFYAKAPAMLIYT PNAVNNPKPVLLSHRNIDAQVRCLIASWRLSPADCMLPILSMNRMHAALGAVLNVGGN VILQQKFDGHNAWSALLGINSPSKQRVTLFLAMPIVYKRLIAEYEKMFAKDSRMVEYI VNHCRQKIRLMATAFALLPDSVFYRWREITGQNIYEYYGMMETGLVLGHPLDEAHNST ARNDYRPGTLGAPLKGVTARLISNKGAELITCKNEMGGTVDHGLIQVEDIGGDMSLAQ TVIGELQIAGSHLVCNSSSASNSRQMERAMETTESEEEAVFFKTGDICAYQNGHFYFL SKTSDVFTVGGYKVYGSEIKKVLISHPNINDVAVLGIPNKLWGHRLGVICIVSPDANI DLDAIKTYCYRHLPAHKCPTVFKTLVSK" misc_feature 296..1885 /gene="Acsf3" /note="This family includes acyl- and aryl-CoA ligases, as well as the adenylation domain of nonribosomal peptide synthetases and firefly luciferases. The adenylate-forming enzymes catalyze an ATP-dependent two-step reaction to first activate a carboxylate...; Region: Adenylate forming domain, Class I superfamily; cl17068" /db_xref="CDD:473059" misc_feature order(767..769,776..793,797..802) /gene="Acsf3" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341228" misc_feature order(776..778,896..901,1049..1051,1055..1060,1067..1069, 1166..1171,1232..1249,1610..1612,1652..1654,1676..1687, 1868..1870) /gene="Acsf3" /note="active site" /db_xref="CDD:341228" misc_feature order(776..778,1166..1171,1232..1249,1610..1612, 1652..1654,1685..1687) /gene="Acsf3" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341228" misc_feature order(896..898,1055..1060,1067..1069,1166..1168, 1676..1684,1850..1852,1868..1870) /gene="Acsf3" /note="CoA binding site [chemical binding]; other site" /db_xref="CDD:341228" polyA_site 2053 /gene="Acsf3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttttcaagcg atagcaactg aaaatcggag ctaaattctg ctctccgtag caactactct 61 aattaagtgt tttcgcgcct acaccactta ataaaataat atataaaaaa aaattaaaaa 121 caaaatgctg ctactgcgac gttgccacaa actaaagctg cgtccttgga ttcgtctctg 181 ctccgcggag ttaatacaca aggatggctt cattgagaaa ctgcgccaca gcttcgatga 241 ggatgagcgc agcaatctgg tggtgcccac gttcaagaag gccatgctct atcccgatga 301 gatcgccgtg aaggacatca ccggggagta cacctacttc cagctgtact tggccgccaa 361 gcgtctggcc atccagatct caaatatatg cggtagtgcc tcattatcga atgtcacata 421 cctgtgctcg aacaacgccc tgtgggtggc catccagtgg agctgctgga tctccggcca 481 ggtggccgtg cccctggaat cgtgccaggc gatagatcaa ctgcgtcgcc aggcgtcgag 541 ctgcaaaacg aagctactga tagcgactcc agagtttgag ccactggctc aggaactctc 601 gcagggattg caatcggcga ccatcatatt ggatcatgcc tttgtcccga cggcggagag 661 tgtgtcctcc acctcgatgt atgccaagca actggttgga acccaaggcg tgatccttac 721 ggagagcacc ctgcccagcg atttctatgc caaggcgccg gccatgctga tctacacgcc 781 caatgcggtg aacaatccca agccggtgct gttaagccat cgcaatatcg atgcccaggt 841 tcgctgcctc atcgccagtt ggcgtctgag tccagcggac tgtatgctac cgattctctc 901 catgaatcgc atgcacgcgg ccctgggtgc cgtcttgaat gtcggcggca atgtgatatt 961 gcagcaaaag ttcgacgggc acaacgcgtg gagtgccctg ctcggcatca atagtccatc 1021 gaagcagagg gtcaccctct ttctggccat gcccattgtg tacaagcggc tgattgccga 1081 gtacgagaag atgttcgcca aggactcgcg gatggtggag tacattgtga atcattgccg 1141 gcagaagatc cgcctgatgg ccaccgcctt tgcgctgctg cccgattcag ttttctaccg 1201 atggcgcgag atcacgggtc agaatatcta cgagtactac gggatgatgg agacgggttt 1261 ggttctgggc catccgctgg atgaagctca taattctacc gcccgtaatg attatcgtcc 1321 tggcactttg ggtgccccct taaaaggagt aacagcccgt ttgatcagca acaagggcgc 1381 cgaattgata acctgcaaga acgaaatggg cggcactgtg gatcatggcc tcatccaggt 1441 ggaggatatc ggcggcgata tgtccttggc ccagacggtg attggtgagc ttcagatagc 1501 cggctcgcat ctggtatgca attcgtcgtc ggccagcaat agtcggcaaa tggaaagggc 1561 aatggaaacc acggaatcgg aggaggaggc ggtcttcttc aagaccggcg acatttgcgc 1621 ctatcagaat ggccactttt acttcctcag caagacgagc gatgtcttca ccgtcggcgg 1681 ctacaaggtt tacggttccg agatcaaaaa ggtcctcatc tcgcatccga acatcaacga 1741 tgtggctgtg ctagggattc cgaataagtt gtggggccat cggctgggcg tcatttgcat 1801 tgtatcgccg gatgcgaata ttgacttgga cgccatcaag acgtactgct atcgtcacct 1861 gccggcccac aagtgcccca ccgtcttcaa gaccctcgtc tccaaataga aaatagagaa 1921 tattatatga aaatgtcata aatctcgcca cccaagctaa aaattcatgt gatctttcgt 1981 gatgttaacc aaaagcaacc tttctttgtc ataatgcgaa taataatata attttaaata 2041 ttttcaattc aaa