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LOCUS XM_017144999 2099 bp mRNA linear INV 09-DEC-2024 (ATbp), transcript variant X2, mRNA. ACCESSION XM_017144999 VERSION XM_017144999.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144999.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2099 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2099 /gene="ATbp" /note="(A+T)-stretch binding protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108059630" CDS 338..1483 /gene="ATbp" /codon_start=1 /product="AT-rich binding protein isoform X2" /protein_id="XP_017000488.1" /db_xref="GeneID:108059630" /translation="MGFPRILSKNNKIYTKLGEFCLSGDSFWIVCHTCQEELQTQDQF WKHIQDEHNFMHGVAKEHSRTSSYCLTDVEAAAAAATSGGSSQQGSTAVSVPLALYHC STKYSEEEQREVELHEQQVQVQQQVQQQVQQQQQQAHQQHHAQQQQQPHQHLQQRDVA KELAELHANAVAAAAAAAVVSTGEGSTPSNSGIDIKIEPASLTLTPEMQAAAAAGGTI YHLPHLVPAPAPPPPPTAGFVSVSASTSTSNTVSTTPPNVLQQQQQQQQLNMSVVPST TMAAAMLAASQEQLPKDSNSTTASAGSAVSSDDGERWYVCDYETCGLKFKYKSRMELH RVVHSKERRFNCELCSASFKQSCNLSTHRKKKHALRGIKSEILPQRF" misc_feature 1283..1351 /gene="ATbp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1373..1429 /gene="ATbp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 2099 /gene="ATbp" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aatcccccgt cgtctatttc gagattaacc actgctcttc aagtcagctg ttattgaata 61 gtggatgcat atggcgctct gtggaaatat gcgttgcaca ttcttaaaaa tcccagccat 121 ttcacacgga tagacacttt gggtagaggc tattaaccaa cattttgtgt aatatttcga 181 aaatagccga tagtatttag tggctaggcg atatggcttc gaaatatgcc gatagttaat 241 cgacattgtc gattgtgccc aatctggccg atagcaaaac aataacaaaa aaacctaaac 301 ataaacaaac acgagctcgt cgaaactaaa cgacgccatg ggttttccgc gcatcctcag 361 caagaacaac aagatctaca cgaagctggg cgagttctgt ttgtcggggg atagcttttg 421 gattgtttgc cacacgtgcc aagaggagct ccagacgcag gatcagttct ggaagcacat 481 acaggatgag cacaacttca tgcacggggt ggccaaggag cacagtcgga cctccagtta 541 ctgcctcacg gatgtggagg ctgcggcagc ggcggccact tcaggtggta gctcgcagca 601 gggctcaact gctgttagtg tgcccctggc tttgtatcac tgctccacca agtactccga 661 ggaagagcag cgtgaggtgg agctccacga gcagcaagtt caagtacaac agcaggtgca 721 acaacaggta caacagcaac agcaacaagc gcaccagcaa caccacgctc aacagcagca 781 gcagccacac cagcatctgc agcagcgcga tgtggccaag gagctggccg aactgcatgc 841 taatgcagtg gctgccgccg cagctgccgc tgtggtttcc acaggcgagg gaagcacacc 901 cagtaatagc ggcattgata tcaagataga gcccgccagt ctcacactaa cacccgaaat 961 gcaggctgct gcagcggctg gcgggaccat ttatcatctg ccgcatctag tgccagcacc 1021 tgcgccgcct ccaccaccca cggcgggatt tgtgagtgtc agtgccagca caagcacctc 1081 caatacagtc agcaccacac cgcccaatgt gctccagcag caacagcagc agcagcaact 1141 caacatgtcc gtcgtccctt ccacgacaat ggccgctgcg atgctggccg ccagtcagga 1201 gcagctacca aaggactcca acagcacgac tgccagcgcc gggagtgcag tgtcttcaga 1261 tgacggagaa cgctggtacg tctgtgacta tgagacatgc ggcctgaagt tcaagtacaa 1321 gtccagaatg gagctgcatc gggtggtgca tagcaaggag cggcggttca actgcgaact 1381 ttgcagtgcg tccttcaagc aatcgtgcaa cctgtccacg caccgaaaga agaaacacgc 1441 gctcaggggc atcaaaagcg agatactgcc gcagcgcttt taggttgtag ataactcaag 1501 cccagcctta agatccccta attgtcactt gtttagctta ctgaaagtca gtcactagga 1561 ctatattcta gccagcaatt ctcataaact ctgtccgaac atttcgtctt agtttatgag 1621 ggttgcgaac ctacaatact tgcatgcttg ccacacgact aagaatgttt ttaccttttc 1681 ttaaaagcct taaaggagca ggaacgacaa aaatctcttg gtttggcgat caccagaaaa 1741 tgtttaaggt gtttcagaat ctcaatattt gcattattgt atatttccaa gccgattcaa 1801 aaacttattt ggttgcaact tgccttaaaa atagagttcc aaactacccc gatgacaccc 1861 ccaattgtaa attaaaaact tacccactgc aatactcttg tggcaggcaa gcaacctacc 1921 tgatatatat ttatatattc ttatatatat atatatatat atatataatg tctaatgtag 1981 gcttagtttc ccttgtaaat gtagtcttaa tgttgaagcg gggttatgtt aacctcctac 2041 gatttagatg tacatgtaat cttttatata gatggggtta attaaaaatc tatacaaaa