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LOCUS XM_017144991 2089 bp mRNA linear INV 09-DEC-2024 (ATbp), transcript variant X1, mRNA. ACCESSION XM_017144991 VERSION XM_017144991.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144991.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2089 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2089 /gene="ATbp" /note="(A+T)-stretch binding protein; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:108059630" CDS 325..1473 /gene="ATbp" /codon_start=1 /product="AT-rich binding protein isoform X1" /protein_id="XP_017000480.1" /db_xref="GeneID:108059630" /translation="MGFPRILSKNNKIYTKLGEFCLSGDSFWIVCHTCQEELQTQDQF WKHIQDEHNFMHGVAKQEHSRTSSYCLTDVEAAAAAATSGGSSQQGSTAVSVPLALYH CSTKYSEEEQREVELHEQQVQVQQQVQQQVQQQQQQAHQQHHAQQQQQPHQHLQQRDV AKELAELHANAVAAAAAAAVVSTGEGSTPSNSGIDIKIEPASLTLTPEMQAAAAAGGT IYHLPHLVPAPAPPPPPTAGFVSVSASTSTSNTVSTTPPNVLQQQQQQQQLNMSVVPS TTMAAAMLAASQEQLPKDSNSTTASAGSAVSSDDGERWYVCDYETCGLKFKYKSRMEL HRVVHSKERRFNCELCSASFKQSCNLSTHRKKKHALRGIKSEILPQRF" misc_feature 1273..1341 /gene="ATbp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 1363..1419 /gene="ATbp" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 2089 /gene="ATbp" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctatttcgag attaaccact gctcttcaag tcagctgtta ttgaatagtg gatgcatatg 61 gcgctctgtg gaaatatgcg ttgcacattc ttaaaaatcc cagccatttc acacggatag 121 acactttggg tagaggctat taaccaacat tttgtgtaat atttcgaaaa tagccgatag 181 tatttagtgg ctaggcgata tggcttcgaa atatgccgat agttaatcga cattgtcgat 241 tgtgcccaat ctggccgata gcaaaacaat aacaaaaaaa cctaaacata aacaaacacg 301 agctcgtcga aactaaacga cgccatgggt tttccgcgca tcctcagcaa gaacaacaag 361 atctacacga agctgggcga gttctgtttg tcgggggata gcttttggat tgtttgccac 421 acgtgccaag aggagctcca gacgcaggat cagttctgga agcacataca ggatgagcac 481 aacttcatgc acggggtggc caagcaggag cacagtcgga cctccagtta ctgcctcacg 541 gatgtggagg ctgcggcagc ggcggccact tcaggtggta gctcgcagca gggctcaact 601 gctgttagtg tgcccctggc tttgtatcac tgctccacca agtactccga ggaagagcag 661 cgtgaggtgg agctccacga gcagcaagtt caagtacaac agcaggtgca acaacaggta 721 caacagcaac agcaacaagc gcaccagcaa caccacgctc aacagcagca gcagccacac 781 cagcatctgc agcagcgcga tgtggccaag gagctggccg aactgcatgc taatgcagtg 841 gctgccgccg cagctgccgc tgtggtttcc acaggcgagg gaagcacacc cagtaatagc 901 ggcattgata tcaagataga gcccgccagt ctcacactaa cacccgaaat gcaggctgct 961 gcagcggctg gcgggaccat ttatcatctg ccgcatctag tgccagcacc tgcgccgcct 1021 ccaccaccca cggcgggatt tgtgagtgtc agtgccagca caagcacctc caatacagtc 1081 agcaccacac cgcccaatgt gctccagcag caacagcagc agcagcaact caacatgtcc 1141 gtcgtccctt ccacgacaat ggccgctgcg atgctggccg ccagtcagga gcagctacca 1201 aaggactcca acagcacgac tgccagcgcc gggagtgcag tgtcttcaga tgacggagaa 1261 cgctggtacg tctgtgacta tgagacatgc ggcctgaagt tcaagtacaa gtccagaatg 1321 gagctgcatc gggtggtgca tagcaaggag cggcggttca actgcgaact ttgcagtgcg 1381 tccttcaagc aatcgtgcaa cctgtccacg caccgaaaga agaaacacgc gctcaggggc 1441 atcaaaagcg agatactgcc gcagcgcttt taggttgtag ataactcaag cccagcctta 1501 agatccccta attgtcactt gtttagctta ctgaaagtca gtcactagga ctatattcta 1561 gccagcaatt ctcataaact ctgtccgaac atttcgtctt agtttatgag ggttgcgaac 1621 ctacaatact tgcatgcttg ccacacgact aagaatgttt ttaccttttc ttaaaagcct 1681 taaaggagca ggaacgacaa aaatctcttg gtttggcgat caccagaaaa tgtttaaggt 1741 gtttcagaat ctcaatattt gcattattgt atatttccaa gccgattcaa aaacttattt 1801 ggttgcaact tgccttaaaa atagagttcc aaactacccc gatgacaccc ccaattgtaa 1861 attaaaaact tacccactgc aatactcttg tggcaggcaa gcaacctacc tgatatatat 1921 ttatatattc ttatatatat atatatatat atatataatg tctaatgtag gcttagtttc 1981 ccttgtaaat gtagtcttaa tgttgaagcg gggttatgtt aacctcctac gatttagatg 2041 tacatgtaat cttttatata gatggggtta attaaaaatc tatacaaaa