PREDICTED: Drosophila takahashii alanyl-tRNA editing protein

LOCUS       XM_017144646            1567 bp    mRNA    linear   INV 09-DEC-2024
            Aarsd1-A (LOC108059399), mRNA.
ACCESSION   XM_017144646
VERSION     XM_017144646.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017144646.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1567
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1567
                     /gene="LOC108059399"
                     /note="alanyl-tRNA editing protein Aarsd1-A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:108059399"
     CDS             123..1439
                     /gene="LOC108059399"
                     /codon_start=1
                     /product="alanyl-tRNA editing protein Aarsd1-A"
                     /protein_id="XP_017000135.2"
                     /db_xref="GeneID:108059399"
                     /translation="MVFKCQEDSFLKQFKTKIVSSEFATLDWPDGSGKVEKLKGFHVV
                     CEDTILFPEGGGQPCDYGTLAGFPVRNVQRKGTTAVHFVESPTSFEQDAEVLLTLDYQ
                     RRLDHMQQHSGQHLITALFDREFKYDTTSWSLGSSASYIQLSTPHLISRESLDLIERQ
                     ANDLIREGRAVTVLLVDPEVAQEFQDARAPRGLPKDHEGLARVVRIEGIESNMCCGTH
                     VTNLSQLQCIKLLYAEKVKTNVLVHFVVGERVLAKLGEVFQREQQLTQALKGGPGQHL
                     ELVQKLQQNVKGSRKYFQQLLKDFATAEAERLEDLPKKERPKYFALHRRDGIEVDFIN
                     TFLRVAPEGIFYFLTVAEGVAAGSSAKGHLVLRGEPEMVEQLGPQFVELLEGKGNGKE
                     GSFQGKINSLARLQDCQALLEAQFRPKKIVVEAPKPSNGAELEKEE"
     misc_feature    135..866
                     /gene="LOC108059399"
                     /note="Ser-tRNA(Ala) deacylase AlaX (editing enzyme)
                     [Translation, ribosomal structure and biogenesis]; Region:
                     AlaX; COG2872"
                     /db_xref="CDD:442119"
     polyA_site      1567
                     /gene="LOC108059399"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gagcatctct agaatgaact ggcggtgaac tagccgccaa atgaacactt gttgacggaa
       61 cgctcataaa ttgtttatta ttgcgatagg ccaactgggg attgcgtgga ttgaatgaga
      121 agatggtgtt caagtgccag gaggacagtt tcctgaagca gttcaagacg aaaatcgtga
      181 gcagcgagtt cgccaccttg gattggccgg atggcagtgg aaaggtggag aaactgaagg
      241 gattccatgt ggtctgcgag gatacgatac tgtttcccga gggcggtggc cagccctgcg
      301 actacggaac tctggccggg tttcccgtga ggaatgtcca gaggaagggc accacggccg
      361 tgcactttgt ggagtccccg acgagcttcg agcaggatgc cgaggtcctg ctgaccctgg
      421 actaccagcg gcggctggac cacatgcagc agcactcggg ccagcacctg atcaccgccc
      481 tgttcgaccg ggagttcaag tacgacacca cctcgtggtc cctgggctcc agcgcctcgt
      541 acatccagct gagcacgccc catttgatca gtcgcgagtc gctggacctc atcgagcggc
      601 aggccaacga tctgatccgg gaggggcgcg cggtcacggt gctcctggta gatcccgagg
      661 tggcgcagga gttccaggac gcccgggcac cacgcggcct gcccaaggac cacgagggcc
      721 tggcgagggt ggtgcgcatc gagggcatcg agagcaacat gtgctgcggc acccacgtca
      781 cgaatctctc gcagttgcag tgcatcaagc tgctgtacgc cgagaaggtc aagacgaatg
      841 tcctggtcca ctttgtggtg ggcgaaaggg tgctcgctaa gctgggcgag gtcttccagc
      901 gcgaacagca gctcacccag gccctcaaag gcgggcccgg ccagcacctg gagctcgtcc
      961 agaagctgca gcagaatgtg aagggcagcc gcaagtactt ccagcagctg ctcaaggact
     1021 ttgccaccgc cgaggccgag cggctggagg atctgcccaa gaaggagcgc cccaagtact
     1081 ttgccctcca tcgacgcgac ggcatcgagg tggacttcat caacacattc ttgcgcgtgg
     1141 cccccgaggg catcttctac ttcctcaccg tcgccgaggg cgtggccgcc ggcagcagtg
     1201 ccaagggcca cctggtgctg cgcggcgagc cggaaatggt cgagcaactg ggcccccagt
     1261 tcgtggagct gctggagggc aagggcaacg gcaaggaggg cagcttccag ggcaagatca
     1321 acagcctggc gcgactgcag gactgccagg cgctgctgga ggcgcaattc aggcccaaga
     1381 agatcgtcgt cgaggctccg aaaccatcaa atggagccga gttggaaaag gaggagtaaa
     1441 ttccgcagat atacaatatt tgtatggtat tacaatgata ttcgaggata aatgttgcct
     1501 atttttaaag caatttacgg aacaatttcc aaagaaaaag aaaggctttt tctgtactaa
     1561 aaacata