Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017144644 2920 bp mRNA linear INV 09-DEC-2024 acid transporter B(0)AT3 (LOC108059397), mRNA. ACCESSION XM_017144644 VERSION XM_017144644.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144644.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2920 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2920 /gene="LOC108059397" /note="sodium-dependent neutral amino acid transporter B(0)AT3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108059397" CDS 737..2920 /gene="LOC108059397" /codon_start=1 /product="sodium-dependent neutral amino acid transporter B(0)AT3" /protein_id="XP_017000133.1" /db_xref="GeneID:108059397" /translation="MANTAQLLRRQSSRDIVLKSQKSIDQLELRELRGRLVTKEHGVS HHHHTSLHHHQPLYGATNQGFMSDAFDESSELEQDPPPFGSEASTSRAKAELVASASA AADQQDIVEGEKEGEERESWDSKIMFLLATIGYAVGLGNVWRFPYLAQKNGGGAFLVP YFIMLCIQGIPIFYLELAIGQRLRKGAIGVWSQVSPYLGGIGISSAVVSYIVALYYNT IIAWCLIYLLHSFESPLPWADCPTRLYKNFTYDHEPECVASSPTQFYWYRTTLQCSES VDLPENFNYHMAIALIVSWFLVYICMVQGITSSGKIVYMTAIFPYVVLIIFFFRGITL KGAADGVAHLFTPRWETLLDPVVWLEAGTQIFFSLGLAFGGLIAFSSYNPANNNCYRD AILVSLTNCGTSMFAGVVVFSVIGFKATATFDRCTEERNGLMAQNKTHNLPVCDLQTE LANSASGTGLAFIIFTEAINQFPGAQLWAVLFFLMLFTLGIDSQFGTLEGVVTSLVDM KLFPNLPKEYIVGGLCFSCCLISMCFANGAGSYIFQLMDSFAGNFPLLIIALFECLSI SYIYGVRRFSDDIEMMTGSRPSFYWMFCWKYLSPCAMVTILLASFYQLLTEGSSYPAW IGAKGASESMEWPHWCIVVAFFLILSSILWIPIVAVLRLCGIKVVEDSDPAWFPEAEL REVHGIVPHEPTELERSIFCFNMDGTEGMCCPKYGLPEKSLEEEE" misc_feature 1097..2722 /gene="LOC108059397" /note="System B(0) neutral amino acid transporter AT1, 2 and 3, and related proteins; solute-binding domain; Region: SLC6sbd-B0AT-like; cd10332" /db_xref="CDD:271364" misc_feature order(1136..1138,1145..1147,2201..2203,2210..2215) /gene="LOC108059397" /note="Na binding site 2 [ion binding]; other site" /db_xref="CDD:271364" misc_feature order(1139..1144,1148..1159,1382..1384,1835..1840, 1853..1855,1859..1861,2213..2215,2222..2227) /gene="LOC108059397" /note="putative substrate binding site 1 [chemical binding]; other site" /db_xref="CDD:271364" misc_feature order(1142..1144,1157..1159,1838..1840,1934..1936) /gene="LOC108059397" /note="Na binding site 1 [ion binding]; other site" /db_xref="CDD:271364" misc_feature order(1163..1168,1379..1381,1391..1393,1400..1402, 2108..2110,2120..2122) /gene="LOC108059397" /note="putative substrate binding site 2 [chemical binding]; other site" /db_xref="CDD:271364" ORIGIN 1 aagtacatat caagatatgt aaaaagaaat gttgacattt tttaatattt aatataattt 61 tataaaattc ataaaattgt aataagacct tcttacttta tttcttgatg tcatttatat 121 tattatatta gaaaaacatt gatttttttt agaatgttaa acatcagtat taataccaat 181 acatttgtca agcgtttttc ccagtattta acttttacta taattttgta cgggaaattg 241 ttatagattt atggcatact tttttctctc tgtgcatgca agttgtatac aattattagt 301 aatacgtatt tcactcgaca aaagcagata gcggcactgc gatggcgtct actactaatg 361 caccgttatc acctgcaatt aagcactaac aaaaccagca ccaaaccaca gtaaaaacca 421 caataaaacc aaaagaaatc agcaaaaaac taaagcaaag aaaacacgtc agaaaggggt 481 taaaatgcga tttatttagc caaccagaaa agtatgctac gaaaaatgtc cagtgagttg 541 ctagttacct gaacgcaaca ccaggtggcg ccgaagaaag tgaaaaccga ggaatatttg 601 gagaaacgga aacggaagtg atagagagcg cacttaggcc cacacacaga agcacacaca 661 cacaccaacc cacacagcac ccacactcac acatctaata ctctgtaata aatcgaaata 721 ataataaaac gcaatcatgg ccaacacagc tcagttattg cgtcgccaaa gttcccggga 781 tatagtcctc aaaagccaga agagcatcga tcagctggaa ttgagggaac tacgaggtcg 841 cctggtgacg aaggagcatg gcgtcagcca ccaccaccac acatcgctgc accaccacca 901 gccgctctat ggggccacca accagggctt catgtccgac gccttcgacg agtcctcgga 961 gctggaacag gacccgccgc ccttcggctc ggaggcgagc acctcgaggg ccaaggccga 1021 gctggtggcc agcgcctccg ccgccgcgga tcagcaggac atcgtcgagg gcgagaagga 1081 gggcgaggag cgggagagct gggacagcaa gatcatgttc ctgctggcca ccatcggcta 1141 tgccgttggc ctgggaaacg tgtggcgctt cccctacttg gcccagaaga acggcggcgg 1201 ggccttcctg gtgccgtact tcataatgct gtgcatccag ggcataccga tcttctacct 1261 ggaactggcc atcggccagc ggctgcggaa gggggccatc ggggtgtgga gccaggtgtc 1321 gccgtacctg ggcggcatcg ggatctcctc ggcggtggtt agctacatag tggccctgta 1381 ctacaatacg ataatcgcgt ggtgtctgat ctatctgctg cacagcttcg agtcgccgct 1441 cccgtgggcg gactgtccga cgcggctgta caagaacttt acctacgatc acgagccgga 1501 gtgtgtggcc tcctcgccga cgcaattcta ctggtaccgc accacgctgc agtgctcgga 1561 gagcgtggac ctgccggaga acttcaacta ccacatggcc atcgcgctga ttgtctcctg 1621 gttcctggtc tacatctgca tggtccaggg catcacgtcg tcgggcaaga tcgtctacat 1681 gacggccatc ttcccctacg tggtgctcat catattcttc ttccggggca tcaccctcaa 1741 gggggcggcc gacggggtgg cccacctgtt cacgccgcgc tgggagacgc tcctggaccc 1801 cgtcgtctgg ctggaggccg gcacccagat cttcttctcg ctgggcctgg ccttcggggg 1861 cctgatagcc ttcagctcct acaatccggc caacaataat tgctacaggg acgcgatact 1921 cgtgtcgctc accaattgcg gcacctctat gttcgccggc gtggtggtat tctcggtcat 1981 cgggttcaag gccacggcga ccttcgaccg ctgcaccgag gagcggaacg ggctgatggc 2041 ccagaacaag acgcacaacc tgcccgtctg cgatctgcaa acggaactgg ccaatagtgc 2101 ttcgggcaca ggactggcct tcattatctt cacggaggcg atcaaccagt ttccgggggc 2161 tcaactctgg gccgtcctct tcttcctgat gctcttcacc ctgggaatcg actcgcagtt 2221 cgggactctg gagggcgtgg tcacctcgct ggtggacatg aagctgtttc ccaatctgcc 2281 caaggagtat attgtggggg gcctctgctt ctcctgctgc ctgatctcca tgtgctttgc 2341 caacggagcc ggcagttata tattccagtt gatggacagc ttcgccggca atttcccgct 2401 gctgatcatc gcgctcttcg agtgcctgtc gatcagctat atctacgggg tgcgccgctt 2461 ctcggacgac atagagatga tgaccggatc gcggccgagc ttctactgga tgttctgctg 2521 gaagtacctg tcgccctgtg cgatggtcac catcctgctg gcctccttct accagctgct 2581 gaccgagggc agcagctacc cggcctggat cggggccaag ggggcctccg agtcgatgga 2641 gtggccccac tggtgcatcg tggtggcctt cttcctcatc ctctcctcca tcctgtggat 2701 cccgattgtg gcggtgttgc gtctctgtgg catcaaggtg gtggaggact cggatcccgc 2761 ctggttcccc gaggcggaac tcagggaggt ccacggcatc gtgccccacg aaccaaccga 2821 attggagcgc agcattttct gcttcaacat ggacggaacg gagggcatgt gctgccccaa 2881 gtacggactt cccgaaaagt ccctcgaaga ggaggagtag