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LOCUS XM_017144641 5023 bp mRNA linear INV 09-DEC-2024 (LOC108059396), transcript variant X1, mRNA. ACCESSION XM_017144641 VERSION XM_017144641.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144641.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5023 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5023 /gene="LOC108059396" /note="uncharacterized LOC108059396; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108059396" CDS 219..2096 /gene="LOC108059396" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_017000130.2" /db_xref="GeneID:108059396" /translation="MPKAKGSSSLGSKGLSRGLSAAVAVPRGSAGPSGGSAVRQQEAK EKQPGKKKKDSLAAKESEVKKKEPLKKEPVKNEPLKTEPVKDATVPNESTPISSIPAI DKLRRFCFIGATEEPVYATPTLDLAVETSFASLQDLCSQVTEGELAECLASVLGSGPN AEHLPRPDEPLLILAVYLTTRDDEKQRKLVRSRFADLVTSESDLMLFVQLVKRVQKLL DRKTPFNRTVRKAILDWYGKQSLDRLLHLWSVGDGTRWSAHRDLLHRCHFRDGDFRPE IMAALRLLSSSPKELSQWPSFLTPLSSNRGIIEGVVKLRLLQDPEQALPIVKKLALSW EHVPLQLLNDPGLAKYLVPRMSYEQLLRSWPRLSRLHHQVRPFAAQLLDEKKLKAGNV PPVRLLLEDMRLRKPRKVCDCRVILMQRASFLHSVYEASFGQNKALGRRLHITLNLEQ HYLGKYLSGRCRSLKYLDALVAMAFGYFRSDPKVTVQFWHDRSGQLKTLPWTKEMSVA EATACCENQKVLKIKQSLTDILDRALEDEKNTYDVFLVLVPGAGRGNQANSSKGLAAL MDEYREKRSSNAKFIILSLRQHHRSMLYSGARNENLLELCSLDEHTPRLINAFARRKF Y" misc_feature 528..1415 /gene="LOC108059396" /note="TROVE domain; Region: TROVE; pfam05731" /db_xref="CDD:461724" polyA_site 5023 /gene="LOC108059396" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tccatcacaa cgcctcctac tatcgataac aaaacataca aattgttttc attgcaaaat 61 tatgtataaa acttgctaag tcgcaaataa ggacaaagag agctgcttca ggagacacgg 121 tgggcgagtc ggatcaaaca gggcgtggca aatcgagcta tcaggcctgt caatccccag 181 aaagtgcggt gtgagcgtaa aatgcaataa tcgctgccat gccaaaggcc aagggatcaa 241 gctcccttgg atcgaaggga ttatcccggg gattatctgc ggcagtcgcg gtgcccaggg 301 gatcggcggg accgtcggga ggatcggcgg tgcggcagca ggaggccaag gagaagcagc 361 cgggcaagaa gaagaaggac tcgctggctg ccaaggaatc tgaagttaag aaaaaggagc 421 ccttgaagaa agagccagta aagaacgagc ccttgaagac agagcccgtt aaagatgcaa 481 cagtgcccaa tgagtccact cccatttcct ccatcccggc gattgacaag ctgcgccgct 541 tctgtttcat cggcgccacg gaagagcctg tctatgctac tcccacgctg gacctcgccg 601 tagagaccag ctttgcgtct ctgcaggacc tctgctccca agtgaccgag ggcgagctgg 661 ccgagtgcct ggcgagtgtc ctgggcagcg gaccgaatgc ggagcacctg ccgcgccccg 721 acgagccgct cctcatcctg gccgtctatc tcaccacgcg cgacgacgaa aagcaacgca 781 aactggtgcg cagccggttc gccgacctgg tgaccagcga atcggacctc atgctctttg 841 ttcagctggt gaagcgagtc cagaagctgc tcgaccgcaa gacgcccttc aatcgcacgg 901 tgcgcaaggc catcctcgac tggtacggca agcaatcgct ggaccgcctg ctccacttgt 961 ggtcggtggg cgacggtacc cgctggtcgg cgcatcgcga cctgctgcac cgctgccact 1021 tccgggacgg cgactttcgg ccggagatca tggctgccct gcggctgctc tcgtcgtcgc 1081 ccaaggagct gtcgcaatgg cccagcttcc tgacgccgct gagcagtaac cgcggcatta 1141 tcgagggcgt ggtgaagctg cgactcctgc aggatcccga gcaggctctg cccattgtca 1201 agaagctagc gctgagctgg gagcacgtgc cgctgcagct gctcaacgat cccgggctgg 1261 ccaagtatct cgtaccacgc atgagctacg agcagctcct ccgcagctgg ccgcgtctct 1321 cgcgactgca tcaccaggtg cgaccctttg ccgcgcagct gctggacgag aagaagctca 1381 aggcgggcaa tgtgccgccc gtgcgcctgc tgctggagga catgcgtctg cggaagccca 1441 ggaaggtgtg cgactgcaga gtgattctta tgcaaagggc gagttttctg catagcgttt 1501 acgaggcatc ctttggccag aacaaggcgc tcggccggcg gctgcacatc accctcaatc 1561 tggagcagca ctacctgggc aaataccttt ccggtcgctg ccgttcgctt aaatacttag 1621 atgccctggt ggccatggcc tttggctact tccgcagcga tcccaaggtg acggtgcagt 1681 tctggcacga ccgcagtggc cagctgaaga cgctgccctg gacaaaggag atgagcgtgg 1741 cagaggccac ggcctgctgc gagaatcaga aggtgctgaa gatcaagcag tcgctgacgg 1801 acattttgga cagagcgctg gaggatgaga agaacacgta cgatgtgttt ctggtgctgg 1861 tgccgggtgc tgggcgagga aatcaggcga atagttccaa gggcttggct gctttgatgg 1921 acgagtaccg cgagaagcgg agctccaatg ccaaattcat tatactaagc ctgcggcagc 1981 accaccgctc catgttgtac tccggcgcac gaaacgaaaa cctgctggag ctgtgcagcc 2041 tggacgagca cacgccgcgc ctgatcaacg ccttcgctcg caggaagttc tactagaaga 2101 gccggaggag cagcctctcg aatcccaatt aatcgcaccg caaagcagtt ccatttgttg 2161 aaggacggtg gccctcggtt cgttgccatc ggccatctct ctcgctttca tagacgcccg 2221 ggcgctcgtc cacccactcc ccacgttccg aatagctttc atgtaacata tacgcgtagg 2281 tccttggcgt gtaatcatcg tagagccagg ccaacttaat gctacatact tatgtactaa 2341 taatggtaat agttacaccc cggaatccag aattcagaaa ccagaattgc aatcgggtta 2401 gttagatatt tttaacgctc gttttgtgta atcacctttg tattcgtatt tgtatttgta 2461 ctagatttgg tggatttatt ttttgaaatc aaactgaatc aactgaactg aactcaatct 2521 aaattcaatt tggattaaaa acaatctcaa agcaaaagca aacgcaagcg caaacaacaa 2581 acaaagaaaa gaaaaggaaa gaaaagaaaa gaaaaaccga caaaaaaaga acaacaaaca 2641 aattgcctta caaacaaaaa tgttagtaaa actttcattt tagtttagac tttttcaaaa 2701 atcgaatact ggaactgaaa ctgaaacaca aattatggca tttagataaa gttaaagtta 2761 aatgtaaact aatcatatgg cctatgtatt gaatattgaa tattattcta acgtaacttt 2821 aaaatagtcc aagtcaaagc aataatcacc aatcactaag cgaatccagt tatagcctca 2881 gatcgatcat agatttatgt tgtgctcgaa tagaatcgaa ttaaattagc taaatagtcg 2941 aaacgcgtac aaggcaaaag atgttaagga aatggaaaat gaaaaggaaa actcccaatg 3001 tgccatacac acaccattaa cagaaacaga aacacacaca cacacacccc atacactcga 3061 tcagtatatt tattaggatt gtgaggaaaa acgccgaacc gaaaccacat agagaacaat 3121 aacgaaacga cgagcaaacg ctaccaattt gactaaaatt agttaagtga aattatactc 3181 aaattacgat taaattacat ttacttgtat agaaagccta gcaaccaatt tggaaggtaa 3241 acaaaaaatc caaccgaaca tagggaaatc gaaacgaaaa caaaaacgaa aattaattaa 3301 ccagaaatcg aaacgatacg aatgaaaata ggaaatattt ccacggacat ttctaaccaa 3361 atgtttccac acgcgtctgt gaagtaaacc gttgtgatcg ctttaaattt tgatttaaac 3421 aaaacataaa tacaaaactg caaactactg aatacaaaaa acaagataca aaatacaaaa 3481 tacagaagag ccggaacaca aacggcaaca ggcggctata agttattcta tatagtttgt 3541 gaactcaaaa tcagtaggat cgtaaccgaa aagtacctat acaacaaaag ctaaactaaa 3601 actgaaactg atactgcaga gccaaccaat tgaactccaa aaatccagca gaactacaca 3661 caagaagtat tcaactaacc cgcgctgcct gagaagaatc gaggataagg tagatcgaag 3721 gatcgggatt cgaaggaagg aggaatcttc ggactaccgc agaatgtata cactttacag 3781 attgtcgagg aaagatctga cctctgcatt gatttgaatt tattgttact aatgctaagg 3841 ctcatttgtg ccctcttcga aagaggaatt aacataagaa aaattggaag agacccaaac 3901 aaaatacttt tttcccccta atctgtggtc tcttcttata attttatttt acaactactt 3961 aagtttaagt ttcaaaagtt tatttatcgg tttaagcaca caaaattttg tggtccgaag 4021 tatatatatg tgtaagagaa atctcgacgt attaatttac gcattccaat ttgaaaacgt 4081 atcattattt ttgtattatt agacctaaaa cgataaacca aatatggtca ttatttataa 4141 tcattttttt ttaatagccc actaacaatt ttttttaaat gggctgattt atttttgcta 4201 attattatat tggggccata cctaaaacca ttattgttac tatataagta aatacttcag 4261 tttgtaaagt gtatcgcaca gagaaacgca aaccaaacag ttaaaaccgt aaagttaccg 4321 aaaagttgaa ccgtgaaaat gaagttaaac aataaaaaca aatgccaagg aaacacattt 4381 cagttagagg aaatttaaat aagaaaaatt attgttgttg atcaaatcaa atcaatttaa 4441 aggaaactaa aaataaaacg aaaactaaaa ctgaaactga aatcgactcg aaacgaattg 4501 aattaaatcc gtagtaaaac agcaacaaga agcaaaacat catgtgatat ctatttcaaa 4561 aataaatcaa ttgacaaact aaagagaaac cctaaccata acaaaaaccg aatatagtaa 4621 aattagccta aagccacgaa gcgttcagaa agcagagttt cgaagacgaa aacgaaaacg 4681 aagattaaga tgaagatgaa gatgaagatt tttataattt tccgttgaag agttacgtaa 4741 gatcccgaac cacagatcca tattgattac taaaacacac acatcagcaa aacatggctc 4801 gactttgact ctctctctat ctctttctcg ccccgcactc tctctatctc tttctgtctg 4861 tagtgttagt cgaaatttgg attgtacgcg cattcccaaa atgttcaact ccttgctaac 4921 gtattccaga aggtttttta taagcatata cataaacgta tacatacttc ttatacacta 4981 atctaggcta acgttgaata aattctgaat gattcgaaca gca