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LOCUS XM_017144637 5475 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017144637 VERSION XM_017144637.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144637.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5475 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5475 /gene="Myc" /note="Myc; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108059395" CDS 638..2827 /gene="Myc" /codon_start=1 /product="myc protein" /protein_id="XP_017000126.2" /db_xref="GeneID:108059395" /translation="MSLHPLDYRTELLMGYDFEYTPFDMGEIFGIDNIQPVSTIQGDL EKIGDVDGGFPDYDMEDDIKPEIRNVDCMWSAMATCLSSGNVNVNGSNGSNNSGSNSA ASSYSETSAISLAVVSGSTNPYSSYQRSITDNATSQTANVQQVVSPEKMAVVIKKELV DLDYVVSQKRRRLSGSDKKSQQQQLNQDEDQLIPPGGSLLRKRNTNNTSSSSSSNNNS SQALDSKYLRPDTPHSLNDEVTAAPEFRHNVDLRACVMGSNNISLTNDDGSYIMQISR DLQNAGKDLFLPARFPIPTMNDVLDVLNMQVNSTSTTNGNGSSNSNSQQQTSQQIDEQ QQAIDIATGCSTVGSPPTTGSDSDSDDGESLNFGLRHHRSSNVASKSSSNGMLQHMKH ISDHSYTRCNDMVDDGPNLETPSDSDEEIDVVSYTDKKLPTNPSCHVMGALQTKMAHK ISIDHMKQKPRYNNFNLPYTPASSSPVKSVANSRYPSPSSTPYQNCSSASPSYSPLSV DSSNVSSSSSSSSSHSSFTVNNNNSKGRKRSCLKAAPGVFTSSVVLPGGGIMMGKKCR GKKVVGSGGHSSSASSSGSTSPVSAGQDAMDAMDRNWQRRNGPSMTSSTSASSSVLRK DFVLGLDEADTIEKRNQHNDMERQRRIGLKNLFEALKKQIPTIRDKERAPKVNILREA AKLCTQLTQEEHELSMQRQVLSMKLKQQQEILARYRLVKSEPHSVSG" misc_feature 2549..2779 /gene="Myc" /note="basic Helix-Loop-Helix-zipper (bHLHzip) domain found in the Myc family; Region: bHLHzip_Myc; cd11400" /db_xref="CDD:381406" misc_feature order(2549..2554,2561..2566,2570..2578,2582..2587, 2597..2599,2657..2662) /gene="Myc" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:381406" misc_feature order(2594..2596,2603..2608,2612..2617,2624..2626, 2663..2665,2672..2677,2684..2686,2690..2698,2702..2707, 2711..2716,2723..2725,2732..2737,2756..2761,2765..2773, 2777..2779) /gene="Myc" /note="tetramer interface [polypeptide binding]; other site" /db_xref="CDD:381406" misc_feature order(2594..2596,2603..2608,2612..2617,2624..2626, 2663..2665,2672..2677,2684..2686,2690..2698,2702..2707, 2711..2716,2723..2725,2732..2737,2756..2761,2765..2770, 2777..2779) /gene="Myc" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:381406" polyA_site 5475 /gene="Myc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctatttgtgt ggcgtcgcga gttcatcgcg atttcatttc tctcttcgct ttgtggattt 61 ggatttttgg ctgttttccg cccgacaaaa aaaacccaaa cactattcgt agaccatagc 121 agagccagca acacacgtta ctgagaaata ctacacacta cactaagtta caaaaacaca 181 cgacaacggg aaaatgtcac atcaaagtta caacagtgct aaaatcgcag aaataccccg 241 ggatccctga atcaaaaaag gagaaaaacc gcgcaaaata tacagcaaat cgaaaggaag 301 ctgaaaaaga aaaacttgtg aaaaactaga aatacaaggc aaagaaaaaa acagccagtg 361 caaattaaac gggaagaatt ttttttggtg tccctttttt tggtgttttt ttattcatcg 421 tcttttcccc ccatttgacg caaaaagtgc gcaacaacac ttgcgagacg gcgggaacgg 481 gatagaaata gatatagccg accgaccccg actggaaagc aaaggaaact gaaacttaac 541 caaattggat tacaattaat tgaatagaga cgacagccgt tcgtagctca ggaaccacta 601 cttcgatata tataggaaaa gcccagactc tgacacaatg tctctacatc cgctcgacta 661 ccgcaccgaa ctgctgatgg gctacgactt cgagtacacc cccttcgata tgggcgagat 721 cttcgggatc gacaacatcc agccggtgtc caccatccag ggcgatctgg agaagatcgg 781 cgacgtggac gggggatttc ccgactatga catggaggac gatataaagc cggagatccg 841 caatgtcgac tgcatgtggt ccgcaatggc cacctgcctg agcagcggca atgtgaatgt 901 aaatggctcc aacggttcca ataactccgg cagcaacagt gcagcctcgt cgtacagtga 961 aaccagtgcc atttccctgg ccgtcgtttc cggctccacg aatccctaca gctcatatca 1021 gcgatcgatc acggataatg ccaccagcca gacggcgaat gtgcagcagg ttgttagccc 1081 cgagaaaatg gccgtggtca tcaaaaagga actggtggat ctggactatg tggtcagcca 1141 gaagcgccgt cgtttgagcg gcagcgataa gaagtcgcag cagcagcagc tgaaccagga 1201 cgaagaccaa ttgataccgc cgggcggaag tctcctccgc aagcggaaca ccaacaacac 1261 aagcagcagc agcagcagca acaacaacag cagccaggca ctggacagca aatacctgag 1321 acccgataca ccgcacagtc tcaacgacga ggtgaccgcc gccccggaat tcaggcacaa 1381 tgtcgatttg cgtgcctgcg tgatgggcag caacaatatc tcgctgacca acgacgatgg 1441 cagttacata atgcaaatca gccgggatct gcagaacgcc ggcaaggatc tgttcctacc 1501 agcacgcttc cccatcccta cgatgaacga tgtcctcgat gtgctcaaca tgcaggtgaa 1561 ttcaacgtcg acaacaaatg gcaacggtag cagcaacagc aacagccaac agcagacaag 1621 ccaacagatt gacgaacaac agcaggccat cgatatagcc accggctgca gtacagtggg 1681 ctctccgccg acaaccggct ccgattcgga ttcagatgat ggcgaatcgc tcaactttgg 1741 tctgcggcac catcgcagca gcaacgtagc cagcaagagc agcagcaacg gcatgttgca 1801 gcacatgaag cacatcagcg atcacagcta tacgcgctgc aacgatatgg tggacgatgg 1861 acccaatctc gagaccccct ccgattccga cgaggaaatc gatgtggtgt cgtatacgga 1921 caagaagctg cccacgaatc cctcgtgcca cgtgatgggc gccctgcaga ccaagatggc 1981 ccacaagatc tcgatcgatc acatgaagca gaagccgcgc tacaacaact tcaatctgcc 2041 gtacacgccg gccagcagca gtccggtgaa gtcggtggcc aactcgcgct acccctcgcc 2101 ctcgagcacg ccctaccaga actgctcctc cgcctcgccg tcctactcgc cgctctcggt 2161 ggactcgtcg aatgtcagct cgagcagttc cagctccagt tcgcactcta gcttcaccgt 2221 taacaacaat aacagcaagg gacgcaagcg atcctgcctg aaggcggccc caggtgtttt 2281 cacgtcgagc gtcgttttgc cgggcggcgg aattatgatg ggcaagaagt gtcgcggcaa 2341 gaaggtggtg ggcagtggcg gccactcatc ctcggcctcc tcgtcgggca gcacatcgcc 2401 cgtttcggcc gggcaggatg ccatggatgc catggatcgc aactggcagc gtcgcaatgg 2461 acccagcatg acctccagta cgagcgccag cagcagtgtc ctccggaagg actttgtttt 2521 gggcctggac gaagccgata cgatcgagaa gcgcaatcag cacaacgata tggagcgaca 2581 gcgtcgcatt ggcctgaaga acctcttcga ggctctgaag aaacagatcc cgacgatcag 2641 ggacaaggag cgggctccca aggtcaatat cctgcgggag gcggccaagc tgtgcactca 2701 gcttacccaa gaggagcacg agttgagtat gcagcgccag gtgctgagta tgaagctcaa 2761 gcagcagcag gagatcctgg cccgctacag gctggtcaaa tccgaaccgc actcggtcag 2821 tggatagtag tgttgtcatc atcaggtcgc ttaaatctgc ttaaagcggc ggcgtagagc 2881 taggacccta tatatatata tatatactat tttatgcgat ttttcatttg attttttaga 2941 ccccccatga tgattctttc ttgaccttaa gccttatatg catgatttct tttttttttt 3001 catttttttt tccgtggaga aacttcaata tcagttggta ggttattttt aatgatgatt 3061 tgcttgcttt gctttttttt cgtaccattc aagaggggtt agtagtgtgt acaagtgatt 3121 taacaaattt gatttcttta atgtgatata tatatgattt tctttccgcg cgatttgatt 3181 tgatttggca aggaagttaa cggaaaacgg ttttatggaa tcaaattgaa gtgttttttt 3241 cgctgcatat attacaatat acatactaca cgtaggacta gtcttaggta gcgtttaggg 3301 gtctgtatat aacatattcg atataggtta tattatagtt atttttttga attagctact 3361 taaccatgaa gtaaacaaaa aggaaaacaa gatttataag gagaaaacaa acgaaaaata 3421 aggacaagaa accaaacaat gaaaactgaa agtaatagtg aagaaagatg gagagaggag 3481 gagaggagat agaggaaaag aggagaaaca caaacttacg aaaagggaaa cacaaaaaga 3541 aaaacaaaaa cggatacgga aaacagacaa aagttacaac gaaagagcca caaagaggag 3601 atagagcaca caaaatcgga agtgagaacg atgagatatg tttaggaata tattagtata 3661 gctaaaagta gaacttttgg ttgccaccac cccaaaaaga ggaaacaaag agccggcttc 3721 aaatggttcc aaacttcttg acgaagcaat acggaacccc atatttcgac cttggttcgc 3781 tagtttacct agaacttacc cccaaaacta tggatatatc ctttttacac gcgcttttgg 3841 gtcctatatc tataaagacg catccttgga gcagaaaaga aacccaaact gtctattcat 3901 gcatacacac ctaaatgctt ttgcttagac ccccagatat cccctgctat acccctttat 3961 atatatatat ttatatatat ctgttagaga cgacacgaag atgaaagaga aaacgctttt 4021 tatatacacc ctaaaaacaa aaacttgaac tctactgcct atattgagaa aatacatttt 4081 atttgctatg aagattcaaa ccagaatata gttatattcg tgcgtatata taggaacctt 4141 tttacaatca tattatcctt tatttttttt ttttttgcta cacctaggta tacatataca 4201 tatatttttt aactaataac tatgcatatg aaatgcgcaa aacttaacga aaacaaaacg 4261 gaattaagga aactttaaac tatttaatag tgctaaacct aaacgaaaac ctctcgagaa 4321 tagctgatat acatagatag gaagcgagag ggcgaaagag tggagaaatt ggctgcaaag 4381 tttgtgattg gagttatgag aaagagagcg agagagaacc agagcgatat atacacccac 4441 gatccaagac ccaagagaac tcaaactttt gtgagctgtt taactgtcga ttttttgcta 4501 ataagttata gcctctcggc aatatgttat atatgattaa cgattatacc aattgtttac 4561 acgcatctaa atatcaacta aataactact actaaactaa aggacatgga atgaagttaa 4621 aaggagcatg agagaatatg taggaaaaca cacgaacgaa ggaaatgtca actgttattt 4681 aggtttagac acacaaaaca catgatatat atggatattc gatatatgat gaccagaaat 4741 tgaatgagat cgggggaggt tatataggta tacacaaaaa atatatatct actatatata 4801 tatataacgc gtaaatttct atagagtagg gcgacgtttc aaggacattt tttatgtgag 4861 ttctaggcta atacctacta tacctatacc caaatatata tatatatata tttcttatac 4921 tttttttttg tttactgcta gctttacatt tgaacccatg aaatattttg tatcttctac 4981 ttttctttta ttacgccgcc gcaaaaactt tttgaaaaac atactactta actcttcttt 5041 ctttttttga ataattaaat acactaaaaa aaacttgtta aatggaaaaa aaatattaca 5101 tatacgtgga caaacaatta aagagtatat tttttgtatt gtttcgacca aaaaaaaatg 5161 tgtacacact gtaaatagca atctcgttaa ataatagtta cacacgccta caaaatagcg 5221 aacccaaaac ccaagagatg gaattatttt tatagaaaac acaaaaacaa aacccggaga 5281 gaaaacacaa agcaatagac ttaagcgaat tgtacaacgc gaaacgaaaa caaaacttca 5341 ataaaccaac aaacacacaa tacacacaca cacaaacaca cctatatata tatacaacat 5401 acacaaacac acacacgaat gcacctattt tcctatagta catacaacaa gaaatagttt 5461 aacgaaacaa aaaca