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LOCUS XM_017144633 1626 bp mRNA linear INV 09-DEC-2024 subunit A-like 2 (LOC108059390), mRNA. ACCESSION XM_017144633 VERSION XM_017144633.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144633.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1626 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1626 /gene="LOC108059390" /note="katanin p60 ATPase-containing subunit A-like 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108059390" CDS 98..1564 /gene="LOC108059390" /codon_start=1 /product="katanin p60 ATPase-containing subunit A-like 2" /protein_id="XP_017000122.2" /db_xref="GeneID:108059390" /translation="MKMKTQGKYGVTATAAAQVLCEDVRNFSTRRRNILYLMHRYLVE NGYYSSAEALKTEGRLTEEYELCDNIDLDGMYLEYASFFNMKFGKYPKILKKMAPKIK VEMAAGKNQEKSVAPPKEILPPKKQTAEASLANWHLGVGAATAALNEQPLQIKKMETT AAADSMSGQENRACEIEHGHLGGDDALFSSLDWQSLAELVKTSILQENIKLRWSDVCG NQRAIELIKEAVLTPIEFPQLFAHGLKPWRSLLLHGPPGSGKTLLAKALYSETQGQVT FFNITASIMVSKWRGESEKILRVLFHMAAKRAPSVIFFDEIESLTSKRDRATDHESSK RFKNELLQLLDGMEHTLNGVFVLASTNLPWDIDEAFLRRFEKKLLVQLPNEAERSCLI SRLLGSSISLNPRLLEQLVAISDQFTGDEIRLACKEISMHRVRCATKVGDHRSTGASS KESQAVMEANVEKAFRQVRPLGQKLLAKHEQWQQENGS" misc_feature 194..268 /gene="LOC108059390" /note="Region: LisH; pfam08513" /db_xref="CDD:462501" misc_feature 743..1237 /gene="LOC108059390" /note="ATPase domain of VPS4, ATAD1, K, KTNA1, Spastin, FIGL-1 and similar ATPase domains; Region: RecA-like_VPS4-like; cd19509" /db_xref="CDD:410917" misc_feature order(743..754,863..883) /gene="LOC108059390" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:410917" misc_feature order(767..769,779..781,791..793,803..805,944..946, 956..961,1043..1045,1097..1102,1109..1111,1121..1123, 1199..1201,1211..1216,1220..1222) /gene="LOC108059390" /note="hexamer interface [polypeptide binding]; other site" /db_xref="CDD:410917" polyA_site 1626 /gene="LOC108059390" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aagtgctgag aaatgcagtt agctgggaaa actacgccat agtagacatc tagaaattcc 61 aaaaaacaat cgacagagat tttcgtggaa aagccagatg aaaatgaaga cccagggaaa 121 atacggagta acagcgacgg cggccgcaca ggttctctgt gaggatgtga ggaacttcag 181 cacacgtcgc cgcaatattc tctacctgat gcaccgctat ctggtggaga atggctacta 241 ctcgagtgcc gaggccctga agaccgaggg ccgccttacc gaggagtacg agctgtgcga 301 taacatagat ctagatggca tgtacctgga gtacgcgagc tttttcaaca tgaaattcgg 361 taaataccca aagattctga agaagatggc accgaaaatc aaggtggaaa tggcggcggg 421 aaagaatcag gaaaagtctg tcgctccccc caaggagatc cttcctccga agaagcaaac 481 agcagaggct tctctggcca attggcacct gggcgtgggt gcagccacgg cggccttgaa 541 tgagcagccg ttgcagatca agaaaatgga aaccacagct gccgctgatt cgatgagtgg 601 ccaggaaaat cgagcttgtg aaatcgaaca tggtcacttg ggtggggatg atgctctgtt 661 ttcttcgctg gactggcaat ctttggccga gctggtcaag acttcgattc tgcaggagaa 721 tatcaagctg agatggtcgg atgtgtgtgg caatcagagg gccatcgaac tgatcaagga 781 ggccgtccta acgcccattg agtttcccca gctctttgcc cacggactga agccctggcg 841 atcgctgctc ctccatgggc cacccggaag cggaaaaacg ctgctggcca aggccctgta 901 ttccgagacc caaggacagg tgaccttctt caatatcacc gccagcataa tggtgagcaa 961 gtggcggggc gaatcggaga agatcctgcg cgtcctcttt cacatggccg caaaaagggc 1021 tccttcggtg atcttcttcg acgaaatcga gagtctgacc tctaaaaggg acagggccac 1081 ggatcacgag agctcgaagc gcttcaagaa cgaactgctg cagctgttgg acggcatgga 1141 gcacaccctg aacggggtct tcgtcctggc cagcaccaat ttgccctggg acatcgacga 1201 ggccttcctg cggcgcttcg agaagaagct gctcgtccag ctgcccaacg aggcggagcg 1261 tagctgcctg atcagccggc ttttaggcag cagcatctcc ctgaatccgc gactcctgga 1321 gcaactggtc gccatctcgg atcagtttac cggcgatgag attcggctgg cctgcaagga 1381 gatcagcatg caccgggtgc gctgtgccac caaggtgggc gatcatcggt ctacgggagc 1441 ctcatccaag gaatcgcagg ctgtgatgga ggccaatgtg gagaaggcct tccggcaggt 1501 gcgtcctttg ggccagaaac tgttggccaa gcacgagcag tggcagcagg agaatggctc 1561 ttaaacgggg ctaaccctca cttaactcgc acttaatcgg tagtgcaata tatatatttt 1621 atacaa