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LOCUS XM_017144629 5124 bp mRNA linear INV 09-DEC-2024 transcript variant X8, mRNA. ACCESSION XM_017144629 VERSION XM_017144629.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144629.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5124 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5124 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins" /db_xref="GeneID:108059389" CDS 402..3413 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase, isoforms N/G isoform X6" /protein_id="XP_017000118.2" /db_xref="GeneID:108059389" /translation="MIATLFIIFAFIRAFPWSRKRGRPALALTLVPDDQDRDRDQKGE NNNRPRPSISLGQGEGMAPRTRRKSSKFHEVTFSGSVGGGESDGGGEVTNGGPSSLEI SPNKRHSLSTTSNSSSAPYRYLSGSSRSRGSRGDCHEYYQLQQQSTSSLSNGGGNRRA LSQRSDTMATEAEGEEFEVDPMDEDDEEDETYDRETEEFYSNIQDATGTGGSSQSRSK RSSLFSRSDSSATTTSSSGGGSGTFTGGKRRSAASILSSSMCSDLMTSDRRSSTATEY SVRSVTTGNAGGNTQRRSSGRIRRYVSRMTIAGARRRTTGSFDVENGQGARSPLEGGS PSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEASILVDRSHGE DLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPSGAPLSQGEE AYTRLATDTIEELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSRSGNQI SEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAASGQQSAGQYARSRSPRGPPMSQI SGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSVNRPLT SVAYTIFQSRELLTSLMIPPKTFLNFMTTLEDHYVKDNPFHNSLHAADVTQSTNVLLN TPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLENHHLA VAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVETKKVA GSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDKERESG MDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRDYYQSM IPPSPPPSGVDENPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTGTTAAS ALGGAGGGGGAGGGVAPRTGGCQNQPQHGGM" misc_feature 1587..1955 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 2391..3113 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 5124 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgcgttcgaa aatattccgc aaaaacgcaa atcgcgaaat tcgtgaacaa ttcgcaaaac 61 gaaaacgcct aaaaatcggc ccaaaatcgc gcattattct ggcaaaaggc aaacaaaata 121 aaacggcaaa atcgaagtgt gtgcataata ttaaggcgaa gaagaagaga tgagagcagc 181 ggacgaagga gcaaaccaca ccgaaatacc gaaattgaac taattaaaat gacgagcctg 241 tagtagtagt agtgcaaaac aataaaatcg acattaagtg aaaaacgaaa atagaaagaa 301 aaaccttaaa acgacgaagg ataaaaaaaa tgccaaagga tgtgcttgca attttctagg 361 ggcagcgagt aaagagaaaa ggagattaag ggtgtgccaa gatgatagcc acgctgttca 421 tcatctttgc attcatacgg gcctttccct ggagcagaaa gcgaggtcgc cccgccttgg 481 ccttgacctt ggtaccagac gatcaagatc gcgatcggga tcaaaagggt gagaacaaca 541 atcggccgag accctcgatt tcgctgggac agggcgaggg aatggcgccg cgcactcgtc 601 gcaaatcctc caaattccac gaggtcacct tcagcggcag cgtgggcggc ggcgaaagcg 661 atggcggtgg cgaggtcacc aacggcggtc cttccagcct cgaaataagt cccaacaaac 721 ggcactcgct gagcaccacc agcaactcca gttcggcacc ctatcgctat ctcagcggga 781 gcagcagatc ccggggctcc cgaggcgatt gccacgagta ctaccaactg caacagcaat 841 cgacatcctc gctatcgaat ggcggaggga atcggcgggc actcagccag cgcagcgata 901 cgatggccac cgaggcggag ggcgaggagt tcgaggtgga tcccatggac gaggacgacg 961 aggaggacga gacttatgac agggagacgg aagagttcta cagcaatatc caggatgcca 1021 cgggcaccgg tggctcgtcg cagagtcgca gcaagagatc ctcgctcttc tccagatcgg 1081 atagctccgc cactaccaca tcctcgagcg gcggcggcag tggaaccttc accggcggca 1141 agcggagatc cgccgcctcc attctgtcct catcgatgtg ctccgacctg atgaccagcg 1201 atcggcggag ctccacggcc accgagtaca gtgtgaggtc ggtgaccacc ggcaatgctg 1261 gcggaaatac gcagcgcagg tcgagcggac ggattcggag atatgtgtca cggatgacga 1321 tcgccggagc gagaagacgc acaacgggca gtttcgatgt agaaaatggc cagggcgctc 1381 gatcaccgct cgagggcggc tctcccagcg ccggtttggt tctacagaat ttgccgcagc 1441 gtcgcgaatc gtttctatat cgctccgatt ccgactttga gatgtcgccc aagtccatgt 1501 ctcgaaactc aagcatcgct agcgaaaggt ttaaagaaca ggaagcctct atactcgttg 1561 accgatccca tggcgaggat ctcattgtga cgcctttcgc ccaaatttta gccagcttac 1621 gttcagtgcg caacaattta ttaagtctga caaatgttcc agcatcaaac aaatccaggc 1681 ggcccaacca atcctcgtcg gcctcccgat cgggaaatcc ctcgggagcc ccgctgtccc 1741 agggcgagga ggcctacacc cgcctggcca ccgacaccat cgaggagctg gactggtgcc 1801 tcgaccagct ggagaccatc cagacccatc gcagcgtctc cgacatggct tcgctcaagt 1861 tcaaacgcat gctcaacaag gagctgtcac acttcagcga gtccagcaga tcgggaaatc 1921 agatttccga gtacatttgt tccacatttt tggacaagca gcaggagttc gacttgccgt 1981 cgctgcgcgt ggaggataat ccggagctgg tggccgccaa tgccgccgcc agcggccagc 2041 agtccgctgg ccagtacgcc cgctcccgct ccccccgcgg cccgcccatg tcgcagatca 2101 gcggcgtgaa gcggcccctt tcgcacacca acagcttcac cggcgaacgg ctgcccacct 2161 tcggcgtgga gacgcccagg gagaacgagc tgggcaccct gctcggcgaa ctggacacct 2221 ggggcatcca gatattcagc atcggcgagt tcagcgtcaa ccgaccgctc accagtgtgg 2281 catacaccat atttcagagt agagaattac tgaccagtct tatgatacca ccgaaaactt 2341 ttcttaactt tatgactact ctggaggacc actacgtcaa agacaatccg tttcacaatt 2401 cgctgcatgc cgccgacgtg acccagagca ccaatgtgct actcaataca ccggcgctgg 2461 agggcgtatt cacaccgctc gaggtgggcg gggcactgtt cgccgcttgc atccacgatg 2521 ttgatcatcc cggcttaacc aatcagttct tggttaactc aagttccgaa ctagcattaa 2581 tgtacaatga cgaatctgtt ttggaaaatc atcatttagc tgttgccttt aaattattgc 2641 aaaatcaagg atgtgatata ttctgtaata tgcaaaagaa acaacgccaa acattgagga 2701 aaatggttat tgatattgtg ctgtccacgg acatgtccaa gcacatgagt ctgctggccg 2761 acctgaagac aatggtggaa accaagaagg tggccggctc cggagtcctg ctgctggaca 2821 actacaccga tcgcatacag gtgctcgaga atctggtgca ctgcgccgat ctgagcaatc 2881 ccaccaagcc gctgccgctt tacaagcgct gggtggccct gctcatggag gagttcttcc 2941 tgcagggcga caaggagcgc gagtcgggca tggacatcag tcccatgtgc gatcgccaca 3001 acgccaccat cgagaagtcg caggtgggct tcatcgacta tatcgtccac ccgctgtggg 3061 agacctgggc ggacctggtg cacccggacg cccaggacat actcgacacg cttgaagaga 3121 acagagacta ctaccagagc atgataccgc cctcgccgcc gccgtcgggg gtcgatgaga 3181 atccgcagga ggacaggata cgctttcaag taaccctgga ggagtccgac caggagaacc 3241 tcgccgagct ggaggagggc gacgagagtg gcggcgagag caccaccacc ggaacaaccg 3301 gaaccaccgc cgcctccgcg ctgggcgggg ctgggggcgg tggcggtgct ggcgggggcg 3361 tggcacccag gacgggtggc tgccaaaacc aaccgcagca cggtggaatg tgacggagag 3421 tcgtgggaat ttatcgcaaa atacaggaaa aggctcacaa ctttttccta ttacgttagt 3481 gactactatt aacacacaaa aaccaaacaa aaaccaaaaa cgaaaaactc aaaaaaaaac 3541 aaagaaaaac tcttggaaaa atgcaaaaaa aaaatacaaa aaaaaaccaa aaagccaact 3601 aaagaaatat taaacaaatg tttaaagcat acaaagaatc caaaacagca atagcaaaag 3661 taccgtttaa cttataaagc ctagagaaaa acgaaaaagg aaattagaaa tttacttaat 3721 ggaacaccga gattgatgtt gaaaatacac tgaaaaaaag agatcacgag gagatgagct 3781 aactaagaga aatcttacat attgttaaac gtacacacac acactaaatc caagacaaag 3841 caaagataat gagaaacccc attgataagt aatactaaga agataccaaa actaccgccc 3901 ccttccccca attatataga cgatttttgt tgcatgtgta ggcaaatgat ttttgttaaa 3961 ttcatctgaa gtgggacatc aatcggagaa aaaccccctg agccccctaa ccaagtctcc 4021 tcttttaaac cattgactaa agtgaaatat ttaaaaacaa gaaaaacaac cgaacggaag 4081 gaataattaa tacgacttag cttaagagaa gtttttaagt tttgaatgtt ttgcatgccc 4141 gaacagattc attttactcg attgataacg ttagatctaa ctttagaccg attaacgcta 4201 acggcaacac acatatggaa ttttttatga tttagacccc agcgatagaa gcgaaaacaa 4261 aaagaaaaac aaaaactaaa accaaccatg ttaagtgtaa gaacccagtg aattaaacca 4321 aaattgaaag ccacccgagt taagaccatt taattcaaat ctaaatccaa atcccgaacc 4381 ccaaacaaca aagaagaaca gtctacagcc agactgtagt tgtatagtaa tatatatgat 4441 ataaatattt ttttttaata ttatttgtaa ataatttaaa tgttggactc gaatttaaat 4501 caagcggcta gcaaatgttg cagccaaact aaaactaaaa tgaaaacaaa gccaaaaaca 4561 cataaataac ataaataagg aagtaagtgg agagaaaaaa aggaaggtgg aaaagaaagg 4621 aaaaactatt gtacaattag ctaaagaatt tccatttcaa ttttcgattt tcgatttgaa 4681 ttgcaatttg atttgcttcc agaaaacaag agaaagagaa agatgataaa gatatagaaa 4741 aggaaaggag aagagatgag aagaaaagaa attagagaga gataaaccga aaataatgtc 4801 aaacgctgtc ttcgcaaata tttttcgcta tatatttact tatatcatta tttactagtt 4861 actaagctac ttactgagcc acacaattta aaaacgaaag agacaagaca cccggtcgag 4921 aaagagaggg agcatcgatg aatttagtga acaaacatta aacttactgg cagaaagcac 4981 acaatttaca aaccacaaag caaaccacca gaaaagactc ttcaagcaca agcaattttt 5041 agttttccaa atgaaaaatg aaaaaccaaa gcaaagcaaa accaacacac aaaggaaaag 5101 caaaacaaga aaaaacaaaa aaca