Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017144626 5310 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017144626 VERSION XM_017144626.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144626.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5310 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5310 /gene="dnc" /note="phosphodiesterase dunce; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins" /db_xref="GeneID:108059389" CDS 399..3599 /gene="dnc" /codon_start=1 /product="3',5'-cyclic-AMP phosphodiesterase isoform X2" /protein_id="XP_017000115.2" /db_xref="GeneID:108059389" /translation="MSQESNSGAGGAPGGGGNGAPPPQYIITTPSEVDADEVRSMGDL ELGSPQSQQAQQMQMQSQKFSSSTTKVASSTTRSFSMSSSLQQQKQEKQENSLQQSQQ KIISSSTRSQSLQSSTIVGEATTISSGATQMLTAAQAATLAQQLKAQSSTSIITSSEQ RTSTSTSSSSSTRFVASGAPSSSSGGGGGVGNSGNNSKTRFQSFLQQPEGAHGFLTAH QKHVRQFVRSTSAHSEAAAGGSSGSGRPEKCIRSASTQIDDTTVGGGGGVVDSSSGSL ADSAATGGSMQLSMSKMGLQQSSSILISKSAETIEMKSSSSSAGMRTQLTLSGGFLAP PGSRKITILSPIHAPPGLHDMLKRAQGRSPLSPRISFPGSDSDLFGFDVENGQGARSP LEGGSPSAGLVLQNLPQRRESFLYRSDSDFEMSPKSMSRNSSIASERFKEQEASILVD RSHGEDLIVTPFAQILASLRSVRNNLLSLTNVPASNKSRRPNQSSSASRSGNPSGAPL SQGEEAYTRLATDTIEELDWCLDQLETIQTHRSVSDMASLKFKRMLNKELSHFSESSR SGNQISEYICSTFLDKQQEFDLPSLRVEDNPELVAANAAASGQQSAGQYARSRSPRGP PMSQISGVKRPLSHTNSFTGERLPTFGVETPRENELGTLLGELDTWGIQIFSIGEFSV NRPLTSVAYTIFQSRELLTSLMIPPKTFLNFMTTLEDHYVKDNPFHNSLHAADVTQST NVLLNTPALEGVFTPLEVGGALFAACIHDVDHPGLTNQFLVNSSSELALMYNDESVLE NHHLAVAFKLLQNQGCDIFCNMQKKQRQTLRKMVIDIVLSTDMSKHMSLLADLKTMVE TKKVAGSGVLLLDNYTDRIQVLENLVHCADLSNPTKPLPLYKRWVALLMEEFFLQGDK ERESGMDISPMCDRHNATIEKSQVGFIDYIVHPLWETWADLVHPDAQDILDTLEENRD YYQSMIPPSPPPSGVDENPQEDRIRFQVTLEESDQENLAELEEGDESGGESTTTGTTG TTAASALGGAGGGGGAGGGVAPRTGGCQNQPQHGGM" misc_feature 1773..2141 /gene="dnc" /note="Phosphodiesterase 4 upstream conserved regions (UCR); Region: PDE4_UCR; pfam18100" /db_xref="CDD:465648" misc_feature 2577..3299 /gene="dnc" /note="3'5'-cyclic nucleotide phosphodiesterase; Region: PDEase_I; pfam00233" /db_xref="CDD:459723" polyA_site 5310 /gene="dnc" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agttgccagt tgcaaatcag acctctgagc agcagcaaca gcacagcggc agcagcaaca 61 tcacagcggc aacagcaaca tcacagcagc aacatcagca cgtgtgcccc aacagcagag 121 ataaatacat aaaacgccga gaaattcaag agaagcggaa gaaaaaagct aaggccaaaa 181 agcaattaaa acaaattgtg ccgtaagtca ggtcggtggg cttacagccc agttccccgg 241 aaaaaaacca aaaaaaaaac cgaaacaaaa aaaaccaaaa aaacacaaaa aaagaaaaca 301 aaacaaaaca ggaaaccacc gcaggatcta cagggaaaac aggacccacc gccctcaaaa 361 gaaacgcgaa aagccagaga aaaatacaaa agtaagccat gtcccaggag agtaatagtg 421 gtgcaggagg agcaccagga ggaggaggca atggtgcacc accaccgcag tacataataa 481 ccacgcccag cgaagtggat gcggatgagg tgcgctccat gggcgacttg gagctgggct 541 ccccgcaatc ccagcaagcc cagcaaatgc agatgcagag ccagaagttc tcgagctcca 601 ccaccaaggt ggcctcctcc accactcgct ccttttcgat gagcagcagc ctgcagcagc 661 agaagcagga gaagcaggag aacagcctgc agcaatcgca gcagaagatc atctccagtt 721 cgacgcgcag ccagagcctt cagtccagca cgattgtggg cgaggccacc accatttcga 781 gtggcgccac ccagatgctc acagccgccc aggcggccac cttggcccag cagctgaagg 841 cccagagctc cacgtcgata atcacgagca gcgagcagcg gaccagcacg agcacgagca 901 gcagcagcag cactcgattc gtggccagtg gagcaccctc tagctcctcc ggtggaggcg 961 gtggcgttgg taactccggc aacaacagca agacccgctt ccagagtttc ctccagcagc 1021 cggagggagc ccatggcttc cttaccgccc accagaagca tgtgcgccag tttgtgcgct 1081 ccacatcggc ccactcggag gcggccgccg gtggttcctc cggcagcggc aggccggaaa 1141 agtgcatccg cagcgcctcc acgcagatcg atgataccac cgttggcggc ggcggaggag 1201 tggtggattc gtcgtcgggc agcttggcgg acagcgccgc caccggcgga tccatgcagc 1261 tgtcgatgag caaaatgggc ctccagcagt cctcctcgat cctcatctcc aagtcggccg 1321 agaccatcga gatgaagagc agctcctcgt cggccggcat gcgcacccag ttgaccttga 1381 gtggcggctt tctcgctccg cccggcagcc ggaagatcac catcttgagc cccatccacg 1441 cgccgcccgg cctccacgac atgctaaaaa gggcccaggg acgctcgccc ctctcgccca 1501 ggatcagctt ccccggcagc gattcggacc tcttcggttt cgatgtagaa aatggccagg 1561 gcgctcgatc accgctcgag ggcggctctc ccagcgccgg tttggttcta cagaatttgc 1621 cgcagcgtcg cgaatcgttt ctatatcgct ccgattccga ctttgagatg tcgcccaagt 1681 ccatgtctcg aaactcaagc atcgctagcg aaaggtttaa agaacaggaa gcctctatac 1741 tcgttgaccg atcccatggc gaggatctca ttgtgacgcc tttcgcccaa attttagcca 1801 gcttacgttc agtgcgcaac aatttattaa gtctgacaaa tgttccagca tcaaacaaat 1861 ccaggcggcc caaccaatcc tcgtcggcct cccgatcggg aaatccctcg ggagccccgc 1921 tgtcccaggg cgaggaggcc tacacccgcc tggccaccga caccatcgag gagctggact 1981 ggtgcctcga ccagctggag accatccaga cccatcgcag cgtctccgac atggcttcgc 2041 tcaagttcaa acgcatgctc aacaaggagc tgtcacactt cagcgagtcc agcagatcgg 2101 gaaatcagat ttccgagtac atttgttcca catttttgga caagcagcag gagttcgact 2161 tgccgtcgct gcgcgtggag gataatccgg agctggtggc cgccaatgcc gccgccagcg 2221 gccagcagtc cgctggccag tacgcccgct cccgctcccc ccgcggcccg cccatgtcgc 2281 agatcagcgg cgtgaagcgg cccctttcgc acaccaacag cttcaccggc gaacggctgc 2341 ccaccttcgg cgtggagacg cccagggaga acgagctggg caccctgctc ggcgaactgg 2401 acacctgggg catccagata ttcagcatcg gcgagttcag cgtcaaccga ccgctcacca 2461 gtgtggcata caccatattt cagagtagag aattactgac cagtcttatg ataccaccga 2521 aaacttttct taactttatg actactctgg aggaccacta cgtcaaagac aatccgtttc 2581 acaattcgct gcatgccgcc gacgtgaccc agagcaccaa tgtgctactc aatacaccgg 2641 cgctggaggg cgtattcaca ccgctcgagg tgggcggggc actgttcgcc gcttgcatcc 2701 acgatgttga tcatcccggc ttaaccaatc agttcttggt taactcaagt tccgaactag 2761 cattaatgta caatgacgaa tctgttttgg aaaatcatca tttagctgtt gcctttaaat 2821 tattgcaaaa tcaaggatgt gatatattct gtaatatgca aaagaaacaa cgccaaacat 2881 tgaggaaaat ggttattgat attgtgctgt ccacggacat gtccaagcac atgagtctgc 2941 tggccgacct gaagacaatg gtggaaacca agaaggtggc cggctccgga gtcctgctgc 3001 tggacaacta caccgatcgc atacaggtgc tcgagaatct ggtgcactgc gccgatctga 3061 gcaatcccac caagccgctg ccgctttaca agcgctgggt ggccctgctc atggaggagt 3121 tcttcctgca gggcgacaag gagcgcgagt cgggcatgga catcagtccc atgtgcgatc 3181 gccacaacgc caccatcgag aagtcgcagg tgggcttcat cgactatatc gtccacccgc 3241 tgtgggagac ctgggcggac ctggtgcacc cggacgccca ggacatactc gacacgcttg 3301 aagagaacag agactactac cagagcatga taccgccctc gccgccgccg tcgggggtcg 3361 atgagaatcc gcaggaggac aggatacgct ttcaagtaac cctggaggag tccgaccagg 3421 agaacctcgc cgagctggag gagggcgacg agagtggcgg cgagagcacc accaccggaa 3481 caaccggaac caccgccgcc tccgcgctgg gcggggctgg gggcggtggc ggtgctggcg 3541 ggggcgtggc acccaggacg ggtggctgcc aaaaccaacc gcagcacggt ggaatgtgac 3601 ggagagtcgt gggaatttat cgcaaaatac aggaaaaggc tcacaacttt ttcctattac 3661 gttagtgact actattaaca cacaaaaacc aaacaaaaac caaaaacgaa aaactcaaaa 3721 aaaaacaaag aaaaactctt ggaaaaatgc aaaaaaaaaa tacaaaaaaa aaccaaaaag 3781 ccaactaaag aaatattaaa caaatgttta aagcatacaa agaatccaaa acagcaatag 3841 caaaagtacc gtttaactta taaagcctag agaaaaacga aaaaggaaat tagaaattta 3901 cttaatggaa caccgagatt gatgttgaaa atacactgaa aaaaagagat cacgaggaga 3961 tgagctaact aagagaaatc ttacatattg ttaaacgtac acacacacac taaatccaag 4021 acaaagcaaa gataatgaga aaccccattg ataagtaata ctaagaagat accaaaacta 4081 ccgccccctt cccccaatta tatagacgat ttttgttgca tgtgtaggca aatgattttt 4141 gttaaattca tctgaagtgg gacatcaatc ggagaaaaac cccctgagcc ccctaaccaa 4201 gtctcctctt ttaaaccatt gactaaagtg aaatatttaa aaacaagaaa aacaaccgaa 4261 cggaaggaat aattaatacg acttagctta agagaagttt ttaagttttg aatgttttgc 4321 atgcccgaac agattcattt tactcgattg ataacgttag atctaacttt agaccgatta 4381 acgctaacgg caacacacat atggaatttt ttatgattta gaccccagcg atagaagcga 4441 aaacaaaaag aaaaacaaaa actaaaacca accatgttaa gtgtaagaac ccagtgaatt 4501 aaaccaaaat tgaaagccac ccgagttaag accatttaat tcaaatctaa atccaaatcc 4561 cgaaccccaa acaacaaaga agaacagtct acagccagac tgtagttgta tagtaatata 4621 tatgatataa atattttttt ttaatattat ttgtaaataa tttaaatgtt ggactcgaat 4681 ttaaatcaag cggctagcaa atgttgcagc caaactaaaa ctaaaatgaa aacaaagcca 4741 aaaacacata aataacataa ataaggaagt aagtggagag aaaaaaagga aggtggaaaa 4801 gaaaggaaaa actattgtac aattagctaa agaatttcca tttcaatttt cgattttcga 4861 tttgaattgc aatttgattt gcttccagaa aacaagagaa agagaaagat gataaagata 4921 tagaaaagga aaggagaaga gatgagaaga aaagaaatta gagagagata aaccgaaaat 4981 aatgtcaaac gctgtcttcg caaatatttt tcgctatata tttacttata tcattattta 5041 ctagttacta agctacttac tgagccacac aatttaaaaa cgaaagagac aagacacccg 5101 gtcgagaaag agagggagca tcgatgaatt tagtgaacaa acattaaact tactggcaga 5161 aagcacacaa tttacaaacc acaaagcaaa ccaccagaaa agactcttca agcacaagca 5221 atttttagtt ttccaaatga aaaatgaaaa accaaagcaa agcaaaacca acacacaaag 5281 gaaaagcaaa acaagaaaaa acaaaaaaca