PREDICTED: Drosophila takahashii cell cycle control protein 50A

LOCUS       XM_017144227            1577 bp    mRNA    linear   INV 09-DEC-2024
            (Cdc50), transcript variant X2, mRNA.
ACCESSION   XM_017144227
VERSION     XM_017144227.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017144227.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1577
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1577
                     /gene="Cdc50"
                     /note="cell cycle control protein 50A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:108059132"
     CDS             117..1190
                     /gene="Cdc50"
                     /codon_start=1
                     /product="cell cycle control protein 50A isoform X2"
                     /protein_id="XP_016999716.2"
                     /db_xref="GeneID:108059132"
                     /translation="MSTQPAENEESAAAKSKRPSDSAFKQQRLPAWQPVLTARTVLPT
                     FFVIGVLFIPIGVVLLHLSNTANELIIDYTKCRPSGGNATCAEYLEANAGGQCTCQVP
                     FVLPTDFNGVVYMYYGLTNYYQNHRRYVKSRDDEQLLGHLSQTPSTDCAPFAYDPESG
                     KPIAPCGAIANSLFNDTLTLMQAGTEIKLLKTGIAWPSDKRVKFRNPEGNLNVSLKDF
                     SKPMFWQKGLAELDPENPENNGFQNEDLIVWMRTAALPSFRKLYRRLNQTDSTYANGL
                     KAGNYTLHITYQYPVVSFDGTKRMILSTTSVLGGKNPFLGIAYIVVGAICITLGLALL
                     FIHMRCNRSNMEMINVNPHTQYS"
     misc_feature    291..1145
                     /gene="Cdc50"
                     /note="LEM3 (ligand-effect modulator 3) family / CDC50
                     family; Region: CDC50; pfam03381"
                     /db_xref="CDD:460906"
     polyA_site      1577
                     /gene="Cdc50"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gatacgaaaa tttattgtat ttactttatt caattggacc aacttgcagc gtgtggacga
       61 gtcaaggagc tttccgagga gccagccgat cccacagaga aaccagataa gccgccatgt
      121 ccacgcagcc agcggagaat gaggagagtg cggcggccaa gtccaagcga ccttcagatt
      181 cggccttcaa gcagcagcgc ctgcccgcct ggcagcccgt cctcaccgcc cgcaccgtcc
      241 tgcccacatt cttcgtgatc ggggtgctct tcatacccat cggcgtggtc ctgctgcacc
      301 tgagcaacac cgccaacgag ctgatcatcg actacaccaa gtgcaggccc tccggcggca
      361 acgccacctg cgccgagtac ctggaggcca acgctggcgg ccagtgcacc tgccaggtgc
      421 ccttcgtcct gcccacggac ttcaatggcg tggtgtacat gtactacgga ctgaccaact
      481 actaccagaa ccaccgtcgc tatgtgaagt cacgggacga cgagcagctg ctgggtcacc
      541 tgtcgcaaac gcccagcacg gactgcgccc ccttcgccta cgatccggag tccgggaagc
      601 ccatcgcgcc atgcggcgcc attgccaact cgctgttcaa tgacacgctg accctgatgc
      661 aggccggcac cgagatcaag ctgctaaaga cgggcatcgc ctggccgtcg gacaagcgcg
      721 tcaagtttcg caatcccgag ggcaatctca acgtctccct caaggacttc tcgaagccca
      781 tgttctggca gaagggcctg gccgagctgg acccggagaa tccggagaac aacggcttcc
      841 agaacgagga tctgatcgtg tggatgcgca cagccgctct gcccagcttc cggaagctat
      901 atcgccggct caaccagacg gacagcacct atgcgaatgg tctgaaggcc ggcaattata
      961 cgctgcatat cacgtaccaa tatccagtgg tctcgttcga cggcaccaag cgcatgatcc
     1021 tgtccaccac ctccgtgctg ggtggcaaga accccttcct gggcattgcg tacattgtcg
     1081 tgggcgccat ttgcatcaca ctgggcctgg ccctgctttt tatccacatg cgatgcaatc
     1141 gcagcaacat ggagatgatc aacgtgaacc cgcacacgca gtactcctag accgagcaga
     1201 ccgtcagtat tccgggccgc ttcacttagc tttagtagat ccatctgttt aagccttatc
     1261 agcataaaat agtttctatc gaccaaacgg cactcgactg ttctcttctt tatgttaact
     1321 aactgtgtgc atttggccat ccgatgagcc gatggtcgtg cctcttgttg attctacttc
     1381 tttttgtctt catgcgtgca cccgacaaaa catttgtgat tcttttatat aacttattct
     1441 gcacaccaaa cacacctatg ggcgccacac gaatttccac cattgcttta caaactgcaa
     1501 agtaatactt tgtgcctgac ctaatctgta ttgcctttta ctacgtttat acgcgcaaat
     1561 aaacactgtt aatggca