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LOCUS XM_017144223 3966 bp mRNA linear INV 09-DEC-2024 chromosomes 3 (SMC3), mRNA. ACCESSION XM_017144223 VERSION XM_017144223.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144223.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3966 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3966 /gene="SMC3" /note="structural maintenance of chromosomes 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108059130" CDS 19..3621 /gene="SMC3" /codon_start=1 /product="structural maintenance of chromosomes protein 3" /protein_id="XP_016999712.1" /db_xref="GeneID:108059130" /translation="MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYA IQFVLSDEFTHLRPEQRQSLLHEGTGARVISAYVEIIFDNSDNRVPIDKEEIFLRRVI GAKKDQYFLNKKVVPRNEVVNLLESAGFSSSNPYYIVKQGKINQMATAADSYRLKLLR EVAGTRVYDERKEESLNLLRETDSKVEKISEYLKTIEDRLQTLEEEKEELKEYQKWDK TRRTLEYIRYETELKDTRKALDELQLQRKSSSDKKKIYNIEIQRAQEKIKDVQKNLKE AKKKVQGTKEERSVLMTEQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLK VTIAEREKELDDVKPKYEAMKRKEEDCSRELQLKEQKRKELYAKQGRGSQFSSREDRD KWITNELKSISKQTRDKIAHHAKLVEDLKKDATSEKDLGQKIEEHSSELEQLRLQIDE HNKKYYELKKTKDQHQSMRNELWRKETQMTQQLQTHKEELSRADQALRSMAGKPILNG CDSVRKVLDSFVERGGQSAEIARAYYGPVIENFSCDKTIYTAVEVTAANRLFHHIVES EYEGTQILKEMNKLKLPGEVTFMPLNRLQVKIHDYPDDPDSIPMISKLKYDEQHDKAL RYIFGKTLICRNLERATELAKSTGLDCVTLDGDQVSSKGSLTGGYFNTSRSRLEMQKK RTEYTSQIAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKSKDVFEKVQGEIR LMKEELLRIEQYRAPKERSLAQCKASLESMTSTKSSLEAELKQELMSTLSSQDQREID QLNDDIRRLNQENKEAFTQRMQFEVRKNKLDNLLINNLFRRRDELIQALQEISVEDRK RKLNNCKTELVSAEKRIKKVNADLEEIEKRVTEAVQLQKELQGELETHVRKEKEAEEN LNKDSKQLEKWSTRENMLNEKIDECTEKIASLGAVPQVDAAYSRMSLKNIFKELEKAN QHLKKYNHVNKKALDQFLSFSEQKEKLYRRKEELDIGDQKIHMLIQSLEMQKVEAIQF TFRQVAQNFTKVFKKLVPMGAGYLILKTKDNEGEEMEKEVANSDAFTGIGIRVSFTGI EAEMREMNQLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQALDAMHRKAVADMIHE LSDTAQFITTTFRPELLENAHKFYGVRFRNKVSHIDCVTREEAKDFVEDDSTHA" misc_feature 22..3558 /gene="SMC3" /note="RecF/RecN/SMC N terminal domain; Region: SMC_N; pfam02463" /db_xref="CDD:426784" ORIGIN 1 gcagtctaat ataataaaat gcacatcaag cagattatta tacaaggctt caagagttac 61 aaggaccaga cggtggtgga gccattcgac aagcgccaca acgttgtagt cggacgcaat 121 ggctccggca agagcaactt cttctacgcc atccagttcg tgctgagcga tgagttcacc 181 cacttgcggc cggagcagcg ccagtcgctg ctgcacgagg gaaccggtgc ccgcgtcatc 241 tccgcctatg tggagatcat cttcgacaac tcggacaacc gggtgccaat cgacaaggag 301 gagatcttcc tgcggcgcgt gatcggcgcc aagaaggacc agtacttcct caacaagaag 361 gtggtgccgc gcaacgaggt ggtcaatctg ctcgagtcgg ccggcttctc cagctcgaat 421 ccctactaca ttgtgaagca gggcaagatc aaccagatgg ccacggcggc cgactcgtat 481 cgcctgaagc tgctgcgcga ggtggccggc acgcgggtgt acgacgagcg gaaggaggag 541 tcgctcaatc tgctgcgcga gacggacagc aaggtggaga agatcagcga gtatctgaag 601 accatcgagg acaggctgca gacgctcgag gaggagaagg aggagctgaa ggagtaccag 661 aagtgggaca agacgcgacg caccctcgag tacatacgct acgagacgga gctgaaggac 721 acgcgcaagg cgctcgacga gctgcagctg cagcgcaagt cgtcgtcgga caagaagaag 781 atctacaaca tcgagatcca gagggcgcag gagaagatca aggatgtgca gaagaacctc 841 aaggaggcca agaagaaggt gcagggcacc aaggaggagc gctccgtcct gatgaccgag 901 cagcagcagc tgctgcgcga gaagaccaag ctggatctca ccatcgtgga tctgaatgac 961 gaggtgcagg gcgacaacaa gtcgaaggag cgcgccgacc aggagctcaa gaacctcaag 1021 gtcacgatag ccgagcgcga gaaggagctg gacgacgtga agcccaagta cgaggcgatg 1081 aagcgcaagg aggaggactg ctcccgcgag ctgcagctga aggagcagaa gcgcaaggag 1141 ctctacgcca agcaggggcg cggctcgcag ttctcctcgc gcgaggatcg cgacaagtgg 1201 atcaccaatg agctgaaatc gatcagcaag cagacgcgcg acaagatcgc ccatcatgcc 1261 aagctggtgg aggacctcaa gaaggacgcc acctccgaga aggatctggg ccagaagatc 1321 gaggagcact cctcggaact ggagcaactg cgcctgcaga tcgacgagca caacaagaag 1381 tactacgagc tgaagaagac caaggaccag caccagtcga tgcgcaacga gctgtggcgc 1441 aaggagaccc agatgacgca gcagctgcag acgcacaagg aggagctctc ccgcgccgac 1501 caggcgctgc gcagcatggc cggcaagccg atcctcaatg gctgcgattc ggtgcgcaag 1561 gtgctcgaca gcttcgtcga gcgcggcggt caatcggcgg agattgcgcg tgcctattac 1621 ggcccagtga ttgagaactt tagctgcgac aagaccatct acacggccgt cgaggtgacg 1681 gccgccaatc ggctgttcca tcacattgtc gagtccgaat acgagggcac ccagatcctc 1741 aaggagatga acaagctgaa gctgcccggc gaggtgacct ttatgccgct gaaccgcctg 1801 caggtgaaga tccacgacta tcccgacgat cccgactcca taccgatgat ctcgaagctc 1861 aagtacgacg agcagcacga caaggcgctg cgctacatct tcggcaagac gctgatctgc 1921 aggaacttgg agcgagccac cgagctggcc aagagcacgg ggctggattg cgtgacgctg 1981 gacggcgatc aggtgtcgtc gaagggctcc ctcacaggcg gctacttcaa tacctcccgc 2041 tcgcgtttgg agatgcaaaa gaaacgcacc gagtacacct cacagatagc cgagttcgaa 2101 aagaagctaa gcaagctgcg aaacgaacta aagtccacgg agaacaacat caattcgatt 2161 gtcagcgaga tgcagaagac ggagacgaag cagggcaagt cgaaggatgt gttcgagaag 2221 gtgcagggcg agatcaggct gatgaaggag gagctgctgc gcatcgagca gtatcgggcg 2281 cccaaggagc gctcgctggc gcagtgcaag gcctcgctgg agtcgatgac cagtaccaag 2341 tccagtctgg aggccgagct caagcaggag ctcatgtcca cgctgtcgtc gcaggatcag 2401 cgcgagatag accagctaaa cgacgatatc cggcggctga accaggagaa caaggaggcc 2461 ttcacgcagc gcatgcagtt cgaggtgcgc aagaacaagc tggacaatct gctgatcaac 2521 aacctctttc ggcggcgcga cgagctcatc caggcgctgc aggagatctc cgtggaggat 2581 cgcaagcgca agctgaacaa ctgcaagacg gagctggtct ccgccgagaa gcgcatcaag 2641 aaggtcaacg ccgatctgga ggagatcgag aagcgggtca cggaggccgt gcagctgcag 2701 aaggagctgc agggggagct cgagacgcat gtgcgcaagg agaaggaggc cgaggagaat 2761 ctcaacaagg attccaagca gctggagaag tggtcgacca gggagaacat gctgaacgag 2821 aagatcgacg agtgcaccga gaagatagcc agtttgggcg ccgttcccca ggtggatgcc 2881 gcctacagcc gcatgtcgct gaagaacatc ttcaaggagc tggagaaggc caatcagcat 2941 ctgaagaagt acaatcatgt gaacaagaag gccctcgatc agttcctcag cttctccgag 3001 caaaaggaga agctgtatcg ccgcaaagag gagctggata tcggggatca gaagatccac 3061 atgctcatcc agtcgctgga gatgcagaag gtggaggcca tacagttcac cttccgccag 3121 gtggcccaga acttcaccaa ggtcttcaag aagctggtgc ccatgggcgc cggctatttg 3181 atactcaaga ccaaggacaa cgagggcgag gagatggaga aggaggtggc caactcggac 3241 gccttcacgg gcatcggcat tcgggtctcc ttcaccggca tcgaggccga gatgcgcgag 3301 atgaaccagc tgtccggcgg ccagaagtcc ctggtcgccc tggccctcat cttctccatc 3361 caaaagtgcg atccggctcc cttctacctg ttcgacgaga tagatcaggc cctggatgca 3421 atgcatcgaa aggcggtggc ggacatgatc cacgagctga gcgacacggc ccagttcatc 3481 acgacaacgt tccggccgga attgctggag aacgcgcaca agttttatgg agtgcgattc 3541 cgcaacaagg tcagccacat cgattgtgtg acccgcgagg aagccaagga ctttgtcgag 3601 gacgacagca cccacgccta agtcgcgaga gattttccca gccaaatcca catcccccag 3661 cccaccaccc ctcgtcatcc ctcgtcgcaa ttattagttg agttttcgta ctcccaagga 3721 tctgttttca catccctggg aatcatctat accgatatat atatatatag ttcttttttt 3781 taaacatact tgctacttgt aattttcctt aacaacgaga gtctaagccg tcgtgctcgc 3841 tgcgtaaaac acttcgagcg agagctgagc cactctaaac ccagatcaat atgtaataaa 3901 gcacatagag aagtaatatt aattatattt aaaaaataaa aacaaacaaa atgtgtatta 3961 aaaagc