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LOCUS XM_017144202 6867 bp mRNA linear INV 09-DEC-2024 variant X3, mRNA. ACCESSION XM_017144202 VERSION XM_017144202.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144202.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6867 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6867 /gene="Rok" /note="Rho kinase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108059116" CDS 737..4900 /gene="Rok" /codon_start=1 /product="rho-associated protein kinase 1 isoform X2" /protein_id="XP_016999691.1" /db_xref="GeneID:108059116" /translation="MPAGLEPVTSRRSMDVERRRRANTLEREMRDPTSICNVDCLLDT VSALVSDCDHDSLRRLKNIEQYAAKYKPLALQINQLRMNVEDFDFIKLIGAGAFGEVQ LVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEWIVQLHFAFQDAKYL YMVMDFMPGGDIVSLMGDYDIPEKWAIFYTMEVVLALDTIHNMGFVHRDVKPDNMLLD SYGHLKLADFGTCMRMGANGQVVSSNAVGTPDYISPEVLQSQGVDNEYGRECDWWSVG IFLYEMLFGETPFYADSLVGTYGKIMDHKNSLSFPPEVEISEQAKALIRAFLTDRTQR LGRYGIEDIKAHPFFRNDTWSFDNIRESVPPVVPELSSDDDTRNFEDIERDEKPEEVF PVPKGFDGNHLPFIGFTYTGDYQLLSSDTVDAESKEASAAVNSSGAASNNHGHGHGHN HRHRPSNSNELKRLEALLERERGRSEALEQQDAGLRQQIELITKREAELQRIASEYEK DLALRQHNYKVAMQKVEQEIELRKKTEALLVETQRNLENEQKTRARDLNINDKVVSLE KQLLEMEQSYKTETEQTQRLKKHNTELDFTVKSQEEKVRDMVDMIDTLQKHKEELGQE NAELQSLVVQEKNLRSQLKELHKEAENKMQTLINDIERTLGREQKAQEDNRALLEKIS DLEKAHAGLDFELKAAQGRYQQEVKAHQETEKSRLVSREEANLQEVKALQSKLNEEKS ARIKADQHSQEKERQLSMLSVDYRQIQLRLQKLEGECRQESEKVAALQSQLDQEHSKR NALLSELSLHSSEVAHLRSRENQLQKELGVQREAKRRFEEDLGQLKGTHHEALANNRE LQAQLEAEQCFSRLYKTQANENREESAERLAKIEDLEEERVSLKHQVQVAVARADSEA LARSIAEETVADLEKEKTIKELELKDFVMKHRNEINAKEAALATLKEAEIELHKKLGQ KGVECEDLLQQHKKQQEELALMRSSKDEEIAKLLDKCKQEVLLKQVAVNKLAEVMNRR DSDLPKQKSKARSTAELRKKEKEMRRLQQELSQERDKFNQLLLKHQDLQQLCAEEQQV KQKMVMEIDCKATEIEHLQSKLNETASLSSADNDPEDSQDSVFEGWLSVPNKQNRRRG HGWKRQYVIVSSRKIIFYNSDIDKHNTTDAVLILDLSKVYHVRSVTQGDVIRADAKEI PRIFQLLYAGEGASHRPDEQSQLDVSVLHGNSNEERPGTIVHKGHEFVHITYHMPTAC EVCPKPLWHMFKPPAAYECKRCRNKIHKEHVDKHDPLAPCKLNHDPRSARDMLLLAAT SEEQSLWVARLLKRIQKSGYKANSSNNNSSTTDGSKISPSQSTRSSYKPYAVNVQRSA TLPANSSLK" misc_feature 917..1969 /gene="Rok" /note="Catalytic domain of the Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase; Region: STKc_ROCK; cd05596" /db_xref="CDD:270747" misc_feature order(920..922,932..934,941..946,953..955,971..985, 992..994,1190..1192,1931..1939,1943..1948,1952..1954, 1967..1969) /gene="Rok" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:270747" misc_feature order(1013..1027,1037..1039,1076..1078,1082..1084, 1178..1180,1226..1231,1235..1237,1247..1249,1253..1255, 1361..1363,1367..1369,1373..1378,1382..1384,1412..1417, 1424..1426,1469..1486,1577..1579,1595..1597,1604..1606) /gene="Rok" /note="active site" /db_xref="CDD:270747" misc_feature order(1013..1027,1037..1039,1076..1078,1082..1084, 1178..1180,1229..1237,1247..1249,1361..1363,1367..1369, 1373..1378,1382..1384,1412..1417) /gene="Rok" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:270747" misc_feature order(1025..1027,1247..1249,1253..1255,1361..1363, 1367..1369,1373..1375,1424..1426,1469..1486,1577..1579, 1595..1597,1604..1606) /gene="Rok" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:270747" misc_feature 1412..1486 /gene="Rok" /note="activation loop (A-loop); other site" /db_xref="CDD:270747" misc_feature 1949..1966 /gene="Rok" /note="hydrophobic motif (HM); other site" /db_xref="CDD:270747" misc_feature 2327..>4027 /gene="Rok" /note="Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; Region: Smc; COG1196" /db_xref="CDD:440809" misc_feature 3293..3508 /gene="Rok" /note="Shroom-binding domain found in Rho-associated coiled-coil containing protein kinase; Region: ROCK_SBD; cd22250" /db_xref="CDD:409019" misc_feature order(3296..3298,3305..3310,3314..3319,3326..3331, 3335..3340,3347..3352,3356..3361,3368..3373,3377..3382, 3389..3394,3401..3403,3410..3412) /gene="Rok" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:409019" misc_feature order(3302..3304,3311..3316,3320..3328,3332..3337, 3341..3358,3365..3367) /gene="Rok" /note="Shroom binding site [polypeptide binding]; other site" /db_xref="CDD:409019" misc_feature 4121..4471 /gene="Rok" /note="Rho-associated coiled-coil containing protein kinase pleckstrin homology (PH) domain; Region: PH_ROCK; cd01242" /db_xref="CDD:269948" misc_feature 4460..4651 /gene="Rok" /note="protein kinase C conserved region 1 (C1 domain) found in the Rho-associated coiled-coil containing protein kinase (ROCK) family; Region: C1_ROCK; cd20813" /db_xref="CDD:410363" polyA_site 6867 /gene="Rok" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 accttcgata tgtaaacata attgccatct ctaccacagc accgaaccga aagaagaagt 61 gcaacgcgca gcgtctaatt aaaaccaaat tgatcgattt ggccgcggcc gaaactggac 121 attcgcaatt tgggcggtca gccgcccccg tcccgtcccg cccccccgcg cgtttcccgc 181 tgccgcctgc gtacagcccg tcggtgtgac gcacgtctcg gtgtgtgtgt ggtgcgcctt 241 gttattgttg ttgtagcatt tgctacgttc gccgttcgcg gtgcgctggt gtgcgagcga 301 gcgaggcgac agtgtgtgcg tgtgtgtaag gtatcgttgg aattaacaaa aaagaaaaaa 361 aaacagaaaa gaaaaacaag attggggaaa aaactgccaa aagccgagaa acaaagctaa 421 tccctagcat cgccaagctc agtggcagac caagccaact gttgcatgcc gaggattggg 481 ggggaaatcc tggccagcag cccctctacc cacagaggct tccaggcacc tgggaaggcc 541 ccgggaaggc cccgggtgct ccactgcgtc cgcatgtggc gttggcggca ctccatctcc 601 aaactgagcc aaactaacgc cgtgacctca tcgccggaac cagaacaaca gagctgcctt 661 ctcacttacc actagcaatc cccgaaagca ggagcagcag cagagcagca gagcagcgga 721 gcagcagagc atttgcatgc cagctggact agaacccgtg accagccggc gcagcatgga 781 tgtggaacga aggcgccggg cgaatacgct cgagcgcgag atgcgcgatc cgaccagcat 841 ctgcaatgtg gactgcctgc tggacacggt gtcggccttg gtcagcgatt gcgaccacga 901 ctccctgagg cggcttaaga acatcgagca gtatgcggcc aaatataaac cactggccct 961 gcagatcaac cagctgcgca tgaacgtcga ggatttcgac ttcatcaagc tcatcggcgc 1021 cggcgccttc ggagaggtgc agctggtgcg gcacaagtcc tccagccagg tgtacgcgat 1081 gaagcggctg tccaaattcg agatgatgaa gcgcccggac tccgccttct tctgggagga 1141 gcgacacatc atggcgcacg ccaactccga gtggatcgtc cagcttcact ttgcctttca 1201 ggatgccaaa tacttgtaca tggtgatgga cttcatgccc ggcggcgaca tagtgtcgct 1261 gatgggcgac tacgacatac cggagaagtg ggccatcttc tacacgatgg aggtggtgct 1321 ggccctggac accattcaca acatgggctt cgtgcaccgc gacgtcaagc cggacaacat 1381 gctgctcgac agctatggcc acctgaagct ggccgacttc gggacgtgca tgcgaatggg 1441 cgccaacggg caggtggtgt ccagcaatgc ggtgggcacg ccggactaca tcagccccga 1501 ggtgctgcag tcgcagggcg tggacaacga gtacgggcgc gagtgcgact ggtggtcggt 1561 gggcatcttc ctctacgaga tgctcttcgg cgagacgccc ttctatgcgg actccctggt 1621 cggcacctac ggcaagatca tggaccacaa gaactcgctc agcttcccgc ccgaggtgga 1681 gattagcgag caggccaagg ccctgatacg cgccttcctc acggaccgaa cgcagcgcct 1741 gggacgctac ggcatcgagg acatcaaggc gcatccgttc ttccgcaacg acacctggtc 1801 gttcgacaat atacgcgaga gcgtgccgcc cgtggtgccg gagctctcgt ccgacgacga 1861 tacgcgcaac ttcgaggaca tcgagcggga cgagaagccg gaggaggtgt ttcccgtgcc 1921 caagggcttc gatggcaacc acctgccctt catcggcttc acctacacgg gcgactacca 1981 gctgctgtcc agcgacaccg tggacgccga gtccaaggag gccagtgcgg cggtgaacag 2041 cagcggggcg gccagtaaca atcacggtca cggtcacggg cacaatcacc gccaccggcc 2101 gtcgaactcc aacgagctga agcgcctgga ggccctgctg gagcgggagc gcggccgctc 2161 ggaggccctg gagcagcagg acgccggtct gcggcagcag atcgagctga taacgaagcg 2221 cgaggcggag ctgcagcgca tcgcctccga gtacgagaag gatctggcct tgcggcagca 2281 caactacaag gtggccatgc agaaggtcga gcaggagatc gagctgcgca agaagaccga 2341 ggcgctgctc gtcgagacgc agcgcaatct ggagaacgag cagaagacgc gggcacgcga 2401 cctgaacatc aacgacaagg tcgtctcgct ggagaagcag ctactcgaga tggagcagag 2461 ctacaagacg gagacggagc agacgcagag gctgaagaag cacaacaccg agctggactt 2521 tacggtcaag tcgcaggagg agaaggtgcg cgacatggtc gacatgatcg acacgctgca 2581 gaagcacaag gaggagctgg gccaggagaa cgccgagctg cagtcgctgg tggtgcagga 2641 gaagaatctg cgctcgcagc tcaaggagct gcacaaggag gccgagaaca agatgcagac 2701 gctgatcaac gacatcgagc ggacgctggg acgcgagcag aaggcccagg aggacaatcg 2761 ggcgctgctc gagaagatca gcgatttgga gaaggcccat gccggcctcg acttcgagct 2821 gaaggccgcg cagggccgct accagcagga ggtgaaggcc caccaggaga cggagaagtc 2881 gcgactggtg tcgcgcgagg aggccaatct gcaggaggtc aaggcgctgc agtcgaagct 2941 caacgaggag aagtccgccc gcatcaaggc cgatcagcat tcgcaggaga aggagcgcca 3001 actgagcatg ctctcagtgg actatcgcca gatccagctg cgcctgcaga agctcgaggg 3061 cgagtgccgc caggagtcgg agaaggtggc cgccctgcag tcgcagctcg accaggagca 3121 cagcaagcgc aacgccctgc tctcggagct cagcctgcac agctcggagg tggcccacct 3181 gcgatcccgc gagaaccagc tgcaaaagga gctgggcgtg cagcgcgagg cgaagcggcg 3241 gttcgaggag gacctcggcc agctgaaggg cacccatcac gaggcgctgg ccaataaccg 3301 ggagctgcag gcccaactcg aggccgagca gtgcttctcg cggctctaca agacgcaggc 3361 gaacgagaac cgcgaggaga gcgccgagcg gctggccaag atcgaggacc tcgaggagga 3421 gcgcgtctcg ctcaagcacc aggtccaggt ggccgtcgcc cgcgccgatt ccgaggctct 3481 ggcccgctcc attgccgagg agacggtggc cgatctggag aaggagaaga ccatcaagga 3541 gctcgagctg aaggactttg tgatgaagca ccgcaacgag atcaacgcca aggaggccgc 3601 tttggccacg ctcaaggagg ccgagatcga gctgcacaag aagctgggcc agaagggcgt 3661 cgagtgcgag gatctgctgc agcagcacaa gaagcagcag gaggagctgg cgctgatgag 3721 gagcagcaag gacgaggaga tagccaagct gctggacaag tgcaagcagg aggttctgct 3781 caagcaggtg gcggtgaata agctggccga ggtgatgaac cgtcgcgact ccgacctgcc 3841 caagcaaaag agcaaggccc gctccaccgc cgagctgcgc aagaaggaga aggagatgcg 3901 ccggctgcag caggagctat cgcaggagcg cgacaagttc aaccagctgc tgctcaagca 3961 ccaggacctc cagcagctgt gcgccgagga gcagcaggtc aagcagaaga tggtcatgga 4021 gatcgactgc aaggccaccg agatcgagca cctgcagagc aagctcaacg agacggcgtc 4081 gctctcctcg gcggacaacg atcccgagga tagccaggac tcggtcttcg agggctggct 4141 gagtgtgccg aacaagcaga accggcgacg tggtcacggc tggaagcggc agtatgtcat 4201 cgtctcgtcg cgcaagatca tcttctacaa ctcggacatt gacaagcaca acaccaccga 4261 tgctgtgctc atcctggatc tgagcaaggt gtaccacgtt cgcagcgtca ctcagggcga 4321 tgttatacgc gccgatgcca aagagattcc gcgcatcttc cagctgctgt acgccggcga 4381 gggtgcctcc catcgtcccg acgagcagag ccagctggat gtgagcgttc tgcatgggaa 4441 tagcaatgag gagcgcccgg gcactattgt ccacaaaggt cacgagttcg tccacataac 4501 ctaccacatg cccacggcct gcgaggtgtg cccgaagcct ttgtggcaca tgttcaagcc 4561 gccggcggct tacgaatgca agagatgccg caacaagatt cacaaggagc atgtggacaa 4621 gcacgacccg ctggcgccct gcaagctgaa ccacgatccc cggagcgcaa gggacatgct 4681 gctgctggcc gccacgtccg aggagcagtc gctgtgggtg gcgcggctgc tgaagcgtat 4741 ccaaaagagt ggatacaagg ccaactcgtc gaacaacaac agcagcacca ccgatggcag 4801 caagatatcg cccagccaat cgacgcgctc ctcctacaag ccgtatgcgg ttaatgtgca 4861 acgctccgcg acgctgccag ccaattcatc gctgaaatga acgcccaacg atcccagatc 4921 ccagatggca aactgcagct ggagccggga gccagcctcc ttcagcccca acgaaactaa 4981 atgctatgca aaactgatac accgatatat agagaggaaa atagcaagag agaaagagca 5041 gctgcaactt gaagggcaac tgcaactact atcttaaata tacgctctaa acatacatgc 5101 tacatgcgct agtaatctac aaatattttt tgagtaattt acaagctaaa actaaactac 5161 aactaaactg aaactaaaac taaaacgaaa acttaaaaca aaaatactaa atactaaaaa 5221 actgtatctt aaagaacatg taaagccaat gcaactcgtt taacgcttac ctaacatcaa 5281 actggatggt gagaaggtct acatagaaca taaaacatag aacacaaaag tggcaacgtc 5341 aggcggctca gaagcgatgc actttgttgt actttatatt ctatatagta tatacatata 5401 aatataaata cgatatggta ttgtacgact tgctattgta ttctgtcatc gcattcagca 5461 caacgatgag agctgtattt agttaagtga atccatatcc atgtcgctgc aaaaggtgat 5521 ccttcacctt ttcccatata tcaaggcctt gtaagaacgt tttttttttc acatatatat 5581 acctatatac atactgttgt tgttgtgtag cgaatcagat tggccaaacg ttgttcttag 5641 ttgtaaagaa acagagctat acaatatata tttgtagaga tatatactag tatatatact 5701 cctccaagag catatcctgt aagccaattg ccagctaaca acaaacgaaa agaatcgagc 5761 aaccaacaaa aaccagaact aagttaaagc cactttacaa agctttaact tgtattccat 5821 ttaatgagca ctctttttta cataaatagt atagatttac gtgtacaaga tggaacgaat 5881 tgcgcgatga tatcgataga agcgaatatc aatcagttac ttaaatagca aacgcgaaag 5941 caactaaaaa tactgtcctg tttcggtttg cagttccgat tccgattcct agttgccttg 6001 gaggcaaaac gaaagttaat tctacagttt gtatttttta ttcttaacga acggggaacc 6061 ggaaacggaa acgtaaacga aacggaatag agtgtctcta gccatggaca gagcgaaaca 6121 tgaatcgaaa ctaaaactaa aactaaaagt aaaagtaaac taaactaaag tctaaagtaa 6181 agtaaagtac acctaactat acaaaacgaa agatgcgaca ccacagtgtt gtgtgcaaaa 6241 ggctacatct aagtattaaa tatccaatat gttctagttg taagctaagc aaattattta 6301 tttatatccc tgttcgatgg cgccatctgg cgttcgacaa cagaaacggc agcagcagct 6361 tagcactctc caatttgttt gtatttgatt tgtattccag taatgttgat tttaccttac 6421 ctatctatct atgatttcga agaacccgtt ttgagttttt ataattttat aatttgagta 6481 gtggtagttt gttttacaga gtgtacagag tgagaggcgc cagcgaattg catttaaaaa 6541 gtaacgataa tagcgatata tttccaagtt tcgggccttc ttcaaacatc ggtagtcggt 6601 tattgttaat cgccaatcgc ctatcgatag ccgcaaacgg ccgcaaagtt cggacttggg 6661 actttgaaat cgaagcgccg ctttcatttt ttactttgta tcttatttgc actattatta 6721 tgatcattcg tattacgttt atgtttaatt gtactctcta gtttaaccac gtttgtaatt 6781 gcatttgtcc tcgaatctta tcggcaggct tccaaatgga attgcaagcg tcaagcaaat 6841 aaaacgataa tgtgtataaa atcagta