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LOCUS XM_017144193 6276 bp mRNA linear INV 09-DEC-2024 variant X4, mRNA. ACCESSION XM_017144193 VERSION XM_017144193.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144193.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6276 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6276 /gene="hang" /note="hangover; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108059112" CDS 381..6194 /gene="hang" /codon_start=1 /product="zinc finger protein hangover isoform X4" /protein_id="XP_016999682.2" /db_xref="GeneID:108059112" /translation="MCDAAAATTTTTTAAVEATATPGTGGATGTVATTSPEASAAATA GATPTTKSERSARQNCCRLCIAPQSECISIINSYAADKEPLSTKIHNCVSIKITPQDR LSLQICHACISYLNSWQSFKNRCFSSQTKQRQWLDANKSKLLNYLDLNSAENGGGGSY DHQQQQQQQQQQQQQQSENELDAEKATPTASATAANILDGIHSLKKRKSLTVYPLPAM PIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDMPLTASDYDYTAQHGVNAS SAAASLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPH NTPITKPTPALAAALEIQRAAAAAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEG GGYDYDNPEQYRPLLTRDKVEFIEQNDEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKK YPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLFRVLNALRGKSTTTAAASVVLSSS EDVAMMDDGAMAIPDQDVLVGAAAMTSPTVTQEVVTPGGGGSSERPEKLRAKELLVNK LYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNM DCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGSGGGGGGASSDNASTTGSGMAR SNSMEHSPGKRSLLGALGIGVGSSADESRSSSAAPPPLTSTPKPAGATQVGGGGSTSA QSSANRDASASASAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKC VRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDY VMKDLMSITNDDEEEEPGSVAKKMRLDDSSNNSSLVGVASQQKECPICNAVFSNNIGL SNHMRSHYTASNAVNAALAAANRMTPKSLTITATPAAGGGGAGDSADVVVGLASSVSA PTTPAASAAAAAANVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKK SYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEV CSIVYSSELELQQHKRSVHKMASASGSASTSASTSCKIDDGDSLMDEAKPTAADLADL STASGAGSSGGQAMLGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCG NVYSGRKSLWVHRYKKHPQVPDPAECSLCRKVFFDRQMHDNHTPTCNRKPITSTGAHQ QQQQQQDHQQQQASLQPARRTVFRHKTGDDEDEEEDDDQQQEMPNSDGNGVAAASSSA VSVTAAPSLKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPAD AGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNN HTTNNNNNNSMLHLRELHAVGLMPNQQQQQQQQQQQSLNNSCNSSSMNHNNSSSNNRS KSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLTCRRCQL EFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPV ATKAAIERTAGAAVAGAAEATAAVPSIGEAADQTEEQTVEKDEGAAAVGATATAAGKQ QEDSDDLDEDDSSEESSGTDDDEDTDDDEEGEAEDEDEEADGGEGEDEEGVQPPSAQL MPQKQQQHQNDDDDDLVEEVISSDDDDDDVEDDGEVESDEDDDDEEDDEEEEEEEVGL PVRPVLMNGKSKMPPLIVASSEDEDDGVMPIEDIIEEEFDEDADPDPDADADPDAIEE EEEVDDDDLDEGDAEDEPNVVSTASSSESESTTTTTSISHSHLNSHSHSHSTGASPEP HQKPYPQWAKAHGSISRSNSNSKQRGSNNNNGSKDEA" misc_feature 558..782 /gene="hang" /note="Zinc-finger associated domain (zf-AD); Region: zf-AD; pfam07776" /db_xref="CDD:462262" misc_feature 2679..2744 /gene="hang" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 2772..2837 /gene="hang" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 3441..3500 /gene="hang" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275371" misc_feature order(3456..3464,3468..3473,3483..3485,3543..3545, 3552..3566,3570..3575) /gene="hang" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275371" misc_feature 3528..3581 /gene="hang" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275371" misc_feature 3888..3950 /gene="hang" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 3978..4034 /gene="hang" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" polyA_site 6276 /gene="hang" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caaactgttt tccagccccg gcggagcatg tcgcagatcc gcagcgttgc gttcaatttt 61 tttccagtgc gattctcctc gttccaaaca aaaccaagcg aaaagaaacc gaaagcgaag 121 gaagggaaag aatagaatag tcggcccagg acagcgataa aaggatcggg gctaaacgac 181 cagtgcgaac aatgtgcgga aagtgggtga cgcggtcggc gtggtcgacg gcgacggaga 241 gcggatagtg tggatggtgt ggggaacgat tgcgaacaga cgcagaccga aacaaaagtg 301 aaaacgtgca aaaaaaaaaa agtaagaagg aaaaaaacaa aagaaacaag aggcgaatag 361 agcgaataca aagcgacaaa atgtgcgacg ctgcggcggc aacaacaaca acaactacag 421 cggcagtgga ggccacagcg acgcctggaa cgggaggagc cactggaacg gtagctacca 481 catcccctga agcttcagcg gcggcgacgg ctggcgctac accaacaaca aaaagcgaac 541 ggtcggcgcg acaaaactgc tgtcgcctgt gcatcgcccc gcaatccgaa tgcatctcga 601 tcatcaatag ctatgcggcg gacaaggagc cgctgtccac caagatccac aactgcgtca 661 gcatcaagat tacaccgcag gatcggctgt cgctccaaat ttgccacgcc tgcatcagct 721 acctgaactc atggcagagc ttcaagaacc gatgcttcag ctcgcagacg aagcagcgcc 781 agtggctgga tgccaacaag agcaagctgc tcaactacct ggacctgaac agtgcggaga 841 atggaggagg aggctcctac gatcaccagc agcagcagca gcagcaacaa cagcagcagc 901 aacagcaatc ggagaatgag ctcgatgcgg agaaggcgac gccaacggcc tcagcaacgg 961 ccgccaacat tttggatggc atacactcgc tgaagaaacg caaatcccta acagtctatc 1021 cactgcccgc gatgcccatt aaagatgagc ccattgacac ggatgacgac taccagatga 1081 agtccattga cgagtctgac gacatggtcg atcccacgat gttcctagag cgctccgagc 1141 acgagggcga tatgccgctg acggcctcgg actacgacta cactgcccag catggcgtga 1201 atgcctcgtc cgccgcagcc tcgctgccgc cgaatgcggt ggccaatgtg gcggccgctg 1261 gcgactccaa ggtggccagc tgccgggcct gcagcctgca gttctccacc cgggccaacg 1321 cccgtcgcca cgagcgcaac ctgcacccga atcttttcca gctgtccacc gactcgccgc 1381 acaacacgcc catcacaaag cccacgcccg ccctagccgc cgccctggag atccagcggg 1441 cagcggctgc ggcggccacg gcggaggcaa atcgagctgc cggtgcggcg ggcggcaaca 1501 tctcgacgca gaagtaccgc caggtggtga tgaacgcgtt catcaagtgc gagggcggcg 1561 gctacgacta cgacaatccc gaacagtacc ggccgctgct cacccgcgac aaggtggagt 1621 tcatcgagca gaacgacgag ttcctcgagc agtaccagac gatgacctgc cgctgctgca 1681 gcaagtactt cagcacgtac aagaacttca tggcccatgt gcgcaagaag tatccgctgc 1741 tgccgcgcaa cctgtgcttc aactgcctca agatgaacga ctccaaggcg ctgttcatct 1801 cgcatctgaa gaagcgcaac tgcatcaatc tctttagggt tttgaatgcg ctgcgtggca 1861 aatcgacgac gacggcggcg gcctcggtcg ttctatcctc atccgaggat gtggcgatga 1921 tggacgatgg agcaatggcc atccccgatc aggatgtttt agtaggagca gccgccatga 1981 ccagtcccac agtgacgcaa gaagtcgtga ctcccggcgg tggcggctcc tccgaacgtc 2041 cggagaagct gcgcgccaag gagctgctgg tcaacaagct gtacgagtgc aagctctgcc 2101 cgaagggttt ccggaccaag cacgagttcc ggacgcatgt ctacgacaag catgcggatg 2161 tgcagcgtaa ggacaacaac tccatacagt gcagcttctg cggactggac tttgccgatc 2221 cggtggacag gcggcggcat tacaacaaca tggactgcat tgtccggctg cgctgcatga 2281 cgtgcgacgc gaagctggag acgcatcagc gtttcctcga ccacgtctac caggatcact 2341 tgggcggcgt gggcggcggc agcggcggcg gtggcggcgg agcgagcagc gataatgcct 2401 ccaccacggg cagcggaatg gccaggagca acagcatgga gcattcgccg ggcaagagga 2461 gtctgttggg tgctctgggc atcggtgttg gctcctcggc ggatgagtcg cgtagcagca 2521 gtgcggctcc tcctccattg acctctacac caaagccagc gggagctacg caagtaggtg 2581 gcggcggctc aacctccgct cagagctcgg cgaatcggga tgcctccgcc tccgcctccg 2641 ctccgaaatc ccagtacttc tcacggatgc cgcaggtctg ccccatttgc ggccagcagt 2701 acaacaacta caacaatgtg ctgcggcaca tggaatcgaa gcatccgaac aaactgcccg 2761 agacctacaa gtgcgtgcga tgcggactgg ggtatccgag gatctcgtac ctgcgggagc 2821 atatgatcaa tgtgcatggc gtggacaaga atcggcactc tggcggcttt gagtacatcg 2881 tgaatgcgga tgcagtgaag ctggccgacg gcagcacgcc gaacgtttac acgggtcgct 2941 acgactatgt gatgaaggac ctgatgtcga taacaaatga tgacgaagag gaggagccgg 3001 gcagcgtggc caagaagatg cggctggacg acagcagcaa caacagcagc ctggtgggcg 3061 tggccagcca gcagaaggag tgccccatct gcaatgcggt gttcagcaac aacattggcc 3121 tctccaatca catgcgctcc cactacacgg cctcgaatgc ggtgaatgcg gctctggcgg 3181 cagccaatcg aatgaccccc aaatcgctta ccatcaccgc cacaccagcg gcaggaggag 3241 gaggagcagg ggattcagcg gatgtggtgg tgggactagc atcatcggtc tcggcgccaa 3301 ccacaccggc tgcctccgcc gccgccgccg ccgccaatgt gccgccggca atggccaatc 3361 aaacgcccca ggagcaggcc gtcttccggc gcagcctcga ccaggcggcc gatcgccgct 3421 tccggcggat gcgctgccgc atctgccagc ggcgcttcag ctcgaagaag tcctatcgct 3481 accacatgct caccgaccat caggtgcaga atgtgcagtt catcaagtgc aagctctgca 3541 acgcggagtt tgcctacgag aagggcctga aggtgcatct gttcaaggtg cacgggcggg 3601 cgatcaagga cgagatgata atcaagcagt tcgagtgcga ggtctgctcg attgtctaca 3661 gttcggagct ggagctgcag cagcacaagc gcagcgtcca caagatggcc tctgcttctg 3721 gctcggcctc cacatcggct tccacttcct gcaagattga cgatggcgac tcgctgatgg 3781 acgaggccaa gcccacggca gcggatctgg ctgatctctc cactgcatcg ggagcgggga 3841 gcagcggggg tcaggccatg ctgggcactc cgctgtactg gtaccagtgc aagtactgcc 3901 cctccaactt caacaccaac aagaagctgg ccatccacat caactcgcac gacgagttcg 3961 actcgaacga ttattcgtgc aaggactgcg gcaacgtcta cagcggacgc aagagtctat 4021 gggtgcatcg ctacaagaag catccgcaag tgcccgaccc cgccgagtgc tcgctgtgcc 4081 gcaaggtctt ctttgaccgg cagatgcatg acaaccacac gcccacctgc aaccgcaagc 4141 cgatcacctc gacgggtgcc caccagcagc agcagcagca gcaggatcat cagcagcagc 4201 aggcgtctct ccagccggcc agacgaaccg ttttccggca caagaccggc gatgacgagg 4261 atgaggagga ggacgatgat cagcagcagg agatgcctaa tagcgatgga aacggggtgg 4321 cggctgcatc cagcagcgcg gtttccgtaa ctgcagcacc ctcgctgaag atccgcatac 4381 ccgaggtggc ctgcaccatt tgcggggccc gcttcaccga ccaggagcac ttcagcaagc 4441 acatacagaa gcacgagcag gagctgtacg tggacaatcc gctggcggcg atgttcgacg 4501 atgggcccgc ggatgccggg cagttccagg tggagcggca gaacgagaac ggggaatacg 4561 cgtgcgattt gtgcgccaag acgttccccc aggtgatcgc actcaaggtg catcgcaagt 4621 ggcatttcag aggtgatagc aagcagaacc ccatcgacgg cgaagcgaca cagttgacca 4681 acaacaatca cacaaccaac aacaacaaca acaactcgat gctgcacctc cgcgagctgc 4741 atgcggtggg cctgatgccc aaccagcagc agcagcagca gcaacagcag cagcagagcc 4801 tcaacaactc gtgcaacagc agcagcatga accacaacaa cagcagcagc aacaaccgca 4861 gcaagtcaat gaagcgaaaa cgtgagctga aatgcgagta ctgcgcctcc accttcatca 4921 gtaacaacaa tctgcgtcgc cacatgtacg agctgcacaa gcacgaggtt agcaatctgc 4981 cggagccgcc ggtgattgtg gtggacgatc atctcacctg ccgtcgctgc cagctggagt 5041 tcgagacaaa ggagctgtgg atcgagcaca agctggccga tgccaaggtg gtgcgaccct 5101 tctgcccctt ccagtggggc tgtgatctgt gcggcgagta tttgtcgcgc aaggagaagc 5161 tgatgaatca cattaacaat catctcaagg aggaggtcat agtgccggtg gccaccaagg 5221 cggcgattga gaggacggca ggagcagcag tagcaggagc agcagaagca accgcagcgg 5281 tgccatcgat aggtgaggca gcagatcaaa cggaggagca aactgtggag aaagatgagg 5341 gtgcagcagc agtaggagca acagcaacag cagcggggaa gcagcaggaa gacagcgatg 5401 acctggacga ggatgatagc tcggaggaga gctcgggtac ggacgacgac gaggataccg 5461 acgacgatga ggaaggcgag gctgaagacg aggacgagga ggcagacggg ggcgagggcg 5521 aggacgagga gggtgtgcag ccaccctcag ctcagctgat gccgcagaag cagcagcagc 5581 accaaaacga cgacgacgac gatctcgtcg aggaggtcat cagttcggat gacgatgacg 5641 acgatgtgga agatgatggc gaggtggaaa gcgacgagga cgacgatgac gaagaggacg 5701 acgaggagga ggaggaggag gaggtgggat tgccggtgcg accggtgcta atgaatggca 5761 agtcgaaaat gccgccgcta attgtggcca gttcggagga cgaggacgat ggtgtgatgc 5821 ccatcgagga cattatcgag gaggagttcg atgaggatgc cgatccggat ccggatgcgg 5881 atgcggatcc cgatgccatc gaggaggagg aggaggtaga cgacgatgat ttagatgagg 5941 gcgatgcgga ggacgagccg aatgtggtgt cgacggcctc ctcatcggag agcgagtcca 6001 ccacaacgac cacgtccata tcgcattcgc atttgaattc acattcgcat tcgcattcca 6061 cgggagcttc tccagagcca catcaaaagc catatcctca atgggccaaa gctcacggca 6121 gcatcagcag aagcaacagc aacagcaagc agcgcggcag caacaacaac aacggcagca 6181 aagacgaagc ctgactccaa gtcagcggtg ctggccaaca ataacaacaa caagagtaag 6241 actgtggctg ccacaacggc aacagcaaca gcaaca