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LOCUS XM_017144173 7846 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X33, mRNA. ACCESSION XM_017144173 VERSION XM_017144173.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144173.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7846 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7846 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins" /db_xref="GeneID:108059094" CDS 1397..7846 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X33" /protein_id="XP_016999662.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNVLT FVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIM PTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMG IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM GLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNISG AGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPW HMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAA KLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMS IRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYTI RNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG SRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTC LDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAA GRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQEW ISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMK LCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTL NLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFT DFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSN FGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGK GVCRCISAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNK PKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFKDES HKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGPLDGDIIIHAHDEDILDEYPAD CCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALAL EDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVS LINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLV CLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDH VGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTL NLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQA IVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLL KIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLR LVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYN FKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLS YLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYD QLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIE ETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKARGEGGGGGGGSFE PDPDQVDGDGGGDPDAGEPANDEPADGMAEAPAGGGGGGGGGDGSVNGGGTGTGTGDG AADAADESNVNSPGEDAASAAAGAATGATAGSPGAGSAGRQTAVLVESDGFVTKNGHK VVIHSRSPSITSRTADV" misc_feature 1814..2668 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3023..3580 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3809..4444 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 4520..5284 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 5294..6109 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6077..6235 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 6122..6133 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 6257..7009 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 7040..7183 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acagtttcag taaaccacgg agacgaacgg attacgggta acgaatcagc agcaacagtg 61 gcagcagcca tcagccagca gccagagaac aaaaaatatc aaagaaaaaa aaacagcact 121 taccaaaaaa aaaggaaata aaaatagtag tcaaaggagg accaaataaa aaaaacacaa 181 aaaactgaaa gagtaaaacc gaatataaaa acggcttaaa ggctaaaatc tcgagcactg 241 agtcctgtta aaaatatgaa ataaaaaagt tcacacactt gccgagccaa ccatatatat 301 atatatcata ctatatatat ataccatcat acatatatat atatccgata tataagtgcc 361 ttgagcagtg cgcaggcagt ccaaagtcca aagaaagttt tacataagtt ctccctcctc 421 aatcaggcaa cgtttttttt ctatagtttt ttttccgtga gtgtgaccca aaaacaaaaa 481 ataatcaaag agaaggaaag gcagcagcag caagaagaag cacaagcaga ataagaagaa 541 gaagaaaacg gaggagaaga agaaggagaa taagaagaag cagccagcca gccatcagga 601 aaacacaaaa gtcaaaaaac aaactatata gagctgagct ggccccaaaa aaaaagaata 661 tataaaaact ctgggaacaa aacgcaacgt ttgatgaaaa tttttggcaa ctcgtcgcgt 721 cgtcttggtt gttgttaacc acatcctgct aacgccaaag tccgaaaata aaattcaacc 781 caaataccca aaaataacac agatcaaaca aacaaagcaa aaaaaaagca aacaaaataa 841 caaaaaaaaa ccaaaaaaaa aaacaaacaa aaaattcatc ttctacttgt tctaccgctt 901 caactttatt cgtcttcgtc tccgtaataa atatataaaa agtatataca tatatatata 961 tatatatatg catatgtgtg tgagtgcgtc gcgtgtgtgt tggtgcctgt aaatgtgtga 1021 gccacaacaa caacaacagc agcagcagcc agagccagag caacaaccac agcagcagca 1081 acaacaacaa caacaacagt agttaacagc agcaacaatt cttagcagca ataacaatac 1141 aagcaagcac caccacaaca acaagagcag caacaacacc aaaaacagcc acaatagcaa 1201 tcacaataac aacatcaaag gatagagcga gcagccaagc acaacatcga ttgacatcga 1261 ttaacgcatc gtgctaagcg gcgggcgcta atcgaacatg gcgcctcgga tatagttgta 1321 gctttaatgt agcaggcgac atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc 1381 gttggccgca tagacaatga cagaagattc cgactcgata tctgaggaag aacgcagttt 1441 gttccgtccc tttacccgcg aatcattggt gcaaatcgaa caacgcattg ccgctgaaca 1501 tgaaaagcag aaggagctgg aaagaaagag agccgaggga gagatccgat atgatgacga 1561 ggacgaggat gaaggtccac aaccggatcc tacacttgaa cagggtgtgc caatacctgt 1621 tcgattgcag ggcagcttcc cgccggaatt ggcctccact cctctcgagg atatcgatcc 1681 cttctacagc aatgtactga cattcgtagt tgtaagcaaa ggaaaagata tttttcgctt 1741 ttctgcatca aaagcaatgt ggatgctcga tccattcaat ccgatacgtc gtgtggccat 1801 ttacattcta gtgcatccat tattttccct attcatcatc accacaattc tcgtcaactg 1861 catcctgatg ataatgccga caacgcccac ggttgagtcc actgaggtga tattcaccgg 1921 aatctacaca tttgaatcag ctgttaaagt gatggcacga ggtttcattt tatgcccgtt 1981 tacgtatctt agagatgcat ggaattggct ggacttcgta gtaatagctt tagcttatgt 2041 gaccatgggt atagatttag gtaatctagc agccttgcga acgtttaggg tgctgcgagc 2101 gcttaaaacc gtagccattg tgccaggctt gaagaccatc gtcggcgccg tcatcgaatc 2161 ggtgaagaat ctgcgcgatg tgataatcct caccatgttc tccctgtcgg tcttcgcgct 2221 gatgggcctg cagatctaca tgggcgtgct cacgcagaag tgcatcaaga agttcccgct 2281 ggacggctcc tggggcaatc tgaccgacga gaactgggac tatcacaatc gcaacagctc 2341 caattggtac tcggaggacg agggcatctc atttccgctg tgcggcaata tatccggcgc 2401 ggggcaatgc gacgatgact acgtgtgtct gcaggggttt gggccgaatc cgaactacgg 2461 ctacaccagc ttcgattcat tcggctgggc cttcctgtcc gccttccggc tgatgacaca 2521 ggacttctgg gaggacctct accagctggt gttgcgcgcc gccggaccat ggcacatgct 2581 gttctttata gtcatcatct tcctaggttc attctatctt gtgaatttga ttttggccat 2641 tgttgccatg tcgtatgacg aattgcaaaa gaaggccgaa gaagaagagg ctgccgaaga 2701 ggaggcgata cgtgaagcgg aggaggctgc cgccgccaaa gctgccaagc tggaggagcg 2761 ggccaatgcg caggctcagg cagcagcgga tgcggctgcc gccgaagagg ctgcactgca 2821 tccggagatg gccaagagtc cgacgtattc gtgcatcagc tatgagcttt tcgttggcgg 2881 cgagaagggc aacgatgaca acaacaagga gaagatgtcc attcgcagcg tcgaggtgga 2941 gtcggagtcg gtgagcgtta tacaaagaca accagcacct accacagcac accaagctac 3001 caaagttcgt aaagtgagca cgacatcctt atccttacct ggttcaccgt ttaacatacg 3061 caggggatca cgtagttctc acaagtacac gatacggaac ggacgtggcc gctttggtat 3121 acccggtagc gatcgcaagc cgttggtatt gtcaacatat caggatgccc agcagcactt 3181 gccctatgcc gacgactcga atgccgtcac cccgatgtcc gaggagaacg gggccatcat 3241 agtgcccgtg tactatggca acctaggctc tcggcactca tcgtatacct cgcatcagtc 3301 ccgaatatcg tatacctcac atggcgatct actcggcggc atggccgtca tgggcgtcag 3361 cacaatgacc aaggagagca aattgcgcaa ccgcaacaca cgcaatcaat cagtgggcgc 3421 caccaatggc ggcaccacct gcctggacac caatcacaag ctcgagcatc gcgactacga 3481 aatcggtctg gagtgcacgg acgaagctgg caagattaaa catcatgaca atccttttat 3541 cgagcccgtc cagacacaaa cggtggtcga catgaaagat gtgatggtcc tgaatgacat 3601 catcgaacag gccgctggtc ggcacagtcg ggcaagcgat cgcggtgtct ccgtttacta 3661 ttttccaaca gaggacgatg acgaggacgg gccgacgttc aaagacaagg cactcgaagt 3721 gatcctaaag ggcatcgatg tgttttgtgt gtgggactgt tgctgggttt ggttgaaatt 3781 gcaggagtgg atctcgctga tcgtcttcga tcccttcgtc gagctcttca tcacgctgtg 3841 cattgtggtc aacacgatgt tcatggcgat ggatcaccac gatatgaaca aggagatgga 3901 gcgcgtgctc aagagtggca actatttctt cacggccacc tttgccatcg aggccaccat 3961 gaagctgtgc gccatgagcc ccaagtacta tttccaggag ggctggaaca tcttcgactt 4021 catcatcgtg gccctgtcgc ttttggagct gggtctcgag ggcgtccagg gcctgtccgt 4081 cttgcgttcg tttcgattgc tgcgtgtatt taaattggcc aaatcttggc caacacttaa 4141 tttactcatt tcgattatgg gacgcaccat gggcgctttg ggtaatctga catttgtact 4201 ttgcattatc atcttcatct ttgcggtgat gggaatgcaa ctgttcggaa agaattatca 4261 tgatcacaag gaccgtttcc cggatggcga cctgccgcgc tggaacttca ccgactttat 4321 gcacagcttc atgatcgtgt tccgggtgct ctgcggcgaa tggatcgagt ccatgtggga 4381 ctgtatgtac gtgggcgatg tctcgtgcat tcccttcttc ttggccaccg ttgtcatcgg 4441 caatcttgtg gtacttaacc ttttcttagc cttgcttttg tccaattttg gctcatctag 4501 cttatcagcg ccgactgccg ataacgatac gaataaaata gccgaggcct tcaatcgaat 4561 tggccgattt aaaagttggg ttaagcgtaa tattgctgat tgtttcaagt taatacgtaa 4621 caaattgaca aatcaaataa gtgatcaacc atcaggcaaa ggcgtttgtc gttgtatatc 4681 tgcagagcat ggtgacaacg aactggagct ggggcacgac gagatcctcg ccgatggcct 4741 gatcaagaag ggaatcaagg agcagacgca actggaggtg gccatcgggg atggcatgga 4801 gttcacgata cacggcgaca tgaagaacaa caagccgaag aaatccaaat atctaaataa 4861 cgcaacgatg attggcaact caattaacca ccaagacaat agactggaac acgagctaaa 4921 ccatagaggt ttgtccttac aggacgacga cactgccagc attaactcat atggtagcca 4981 taagaatcga ccattcaagg acgagagcca caagggcagc gccgagacga tggagggcga 5041 ggagaagcgc gacgccagca aggaggattt aggtctcgac gaggaactgg acgaggaggg 5101 cgaatgcgag gagggcccgc tcgacggtga tatcattatt catgcacacg acgaggatat 5161 actcgatgaa tatccagctg attgctgccc cgattcgtac tataagaaat ttccgatctt 5221 agccggtgac gatgactcgc cgttctggca aggatggggc aatttacgac tgaaaacttt 5281 tcaattaatt gaaaataaat attttgaaac agctgttatc actatgattt taatgagtag 5341 cttagctttg gcattagaag atgtacatct gccacaaaga cccatactgc aggatatttt 5401 atactatatg gacagaatat ttacggttat attcttcttg gaaatgttaa tcaagtggtt 5461 ggcgctcggc ttcaaagtgt acttcaccaa cgcgtggtgt tggctcgatt tcgtgattgt 5521 catggtatcg cttatcaact tcgttgcttc acttgttgga gctggtggta ttcaagcctt 5581 caagactatg cgaacgttaa gagcactgag accactacgt gccatgtccc gtatgcaggg 5641 catgagggtc gtcgttaatg cgctggtaca agctataccg tccatcttca atgtgctatt 5701 ggtgtgtcta atattttggc taatttttgc cataatgggt gtacagcttt ttgctggaaa 5761 atattttaag tgcgaggaca tgaacggcac gaagctcagc cacgagatca taccaaatcg 5821 caatgcctgc gagagcgaga actacacgtg ggtgaattca gcaatgaatt tcgatcatgt 5881 aggtaacgcg tatctgtgcc ttttccaagt ggccaccttc aaaggctgga tacaaataat 5941 gaacgatgct atcgattcac gagaggtgga caagcaacca attcgtgaaa cgaacatcta 6001 catgtattta tatttcgtat tcttcatcat atttggatca tttttcacac tcaatctgtt 6061 cattggtgtt atcattgata attttaatga gcaaaagaaa aaagcaggtg gatcattaga 6121 aatgttcatg acagaagatc agaaaaagta ctataatgct atgaaaaaga tgggctctaa 6181 aaaaccatta aaagccattc caagaccaag gtggcgacca caagcaatag tctttgaaat 6241 agtaaccgat aagaaattcg atataatcat tatgttattc attggtctga acatgttcac 6301 catgaccctc gatcgttacg atgcgtcgga cacgtacaac gcggtcctag actatctcaa 6361 tgcgatattc gtagttattt tcagttccga atgtctatta aaaatattcg ctttacgata 6421 tcactatttt attgagccat ggaatttatt tgatgtagta gttgtcattt tatccatctt 6481 aggtctcgta cttagcgata ttatcgagaa gtacttcgtg tcgccgaccc tgctccgagt 6541 ggtgcgtgtg gcgaaagtgg gtcgagtcct gcgactggtg aagggcgcca agggcatcag 6601 gacactgcta ttcgcgttgg ccatgtcgct gccggccctc ttcaacatct gcctgctgct 6661 gttcctggtc atgttcatct tcgccatctt cggcatgtcg ttcttcatgc acgtgaagga 6721 gaagagcggc atcaacgacg tctacaactt caagaccttt ggtcagagca tgatcctgct 6781 ctttcagatg tcgacgtcag ccggttggga tggtgtactg gacgccatta tcaatgagga 6841 agcatgcgat ccacccgaca acgacaaagg ctatccgggc aattgtggtt cagcgaccgt 6901 tggaataacg tttctcctct catacctagt tataagcttt ttgatagtta ttaatatgta 6961 cattgctgtc attctcgaga actatagtca ggccaccgag gacgtgcaag agggtctaac 7021 cgacgacgac tacgacatgt actacgagat ctggcagcaa ttcgatccgg agggcaccca 7081 gtatatacgc tacgaccagc tgtccgaatt cctggacgtg ctggagcccc cgctgcagat 7141 ccataagccg aacaagtaca agatcatatc gatggacata cccatctgtc gcggcgacct 7201 catgtactgt gtcgacatcc tcgacgccct cacgaaagac ttctttgcgc gcaagggcaa 7261 tccgattgag gagacgggcg agatcggtga gatagccgcc cgtccggaca cggagggcta 7321 tgagcccgtc tcatcgacgc tgtggcgcca gcgggaggag tactgtgccc gtctcatcca 7381 gcacgcctgg cggaagcaca aggcgcgcgg cgagggcggt ggtggtggtg gtgggtcctt 7441 cgagccggat ccggatcagg tcgatggcga tggtggtggc gatccggatg ccggggagcc 7501 tgcaaacgac gaaccggcgg atgggatggc tgaggccccc gcaggaggag gaggaggagg 7561 aggaggagga gatggtagtg ttaatggtgg aggaactgga actggaactg gagacggagc 7621 tgccgatgct gccgacgaga gcaatgtaaa tagtccgggt gaggatgcag cgtcggcggc 7681 agcaggagcg gcgacaggag cgacggcggg aagtcccggg gcgggcagcg ccggacgaca 7741 gaccgccgtt ctcgtggaga gcgacgggtt cgtgacgaag aacggccaca aggtggtcat 7801 ccactcgcga tcgccgagca tcacgtcgcg cacggcggat gtctga